Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30649
         (586 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021497-13|CAA16411.2|  550|Caenorhabditis elegans Hypothetical...    30   1.4  
Z82288-6|CAB05325.1| 1112|Caenorhabditis elegans Hypothetical pr...    28   5.6  
U80023-5|AAG24040.1|  315|Caenorhabditis elegans Serpentine rece...    28   5.6  
AB201389-1|BAE78829.1| 1113|Caenorhabditis elegans recepotor typ...    28   5.6  
Z81066-3|CAI46608.1|  363|Caenorhabditis elegans Hypothetical pr...    27   7.4  

>AL021497-13|CAA16411.2|  550|Caenorhabditis elegans Hypothetical
           protein Y51A2D.18 protein.
          Length = 550

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 338 KRHKYFVIIQI-WRSNMTIIIYRCWIKIAVKSFCHLNTF 451
           K+H+ ++ + I W  NM I  Y  W+    KS  ++N F
Sbjct: 210 KKHRMWINMAITWSPNMPIYSYFAWLASDWKSLAYINAF 248


>Z82288-6|CAB05325.1| 1112|Caenorhabditis elegans Hypothetical
           protein ZK896.8 protein.
          Length = 1112

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 256 NNWKSSYVQYENDCKINKNRNAKKTV 333
           N  KSSY Q++N  K+  N+  K+ +
Sbjct: 28  NGEKSSYTQFDNGAKLEVNKEHKRVI 53


>U80023-5|AAG24040.1|  315|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 31 protein.
          Length = 315

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 10/32 (31%), Positives = 22/32 (68%)
 Frame = +2

Query: 104 TISPWYRVCNLNLSERLIFYSK*DVVTEIFIT 199
           T  P +  C++ LS +++++S   ++T++FIT
Sbjct: 152 TYLPLFGSCDMVLSGKIVYWSAITLITQLFIT 183


>AB201389-1|BAE78829.1| 1113|Caenorhabditis elegans recepotor type
           guanyly cyclase protein.
          Length = 1113

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 256 NNWKSSYVQYENDCKINKNRNAKKTV 333
           N  KSSY Q++N  K+  N+  K+ +
Sbjct: 28  NGEKSSYTQFDNGAKLEVNKEHKRVI 53


>Z81066-3|CAI46608.1|  363|Caenorhabditis elegans Hypothetical
           protein F17B5.6 protein.
          Length = 363

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
 Frame = +1

Query: 205 KYAFYKFSLVIYIIIT*NNWKS----SYVQYENDCKINKNRNAKKTVDKE-AQIFC 357
           +Y F K+S  IY+I    +W      ++V + ND K+ +  N +   D   +Q++C
Sbjct: 247 EYLFTKYSGTIYMISNDPDWVGEHIVNHVAFRNDMKVLRTPNNRAIDDLYFSQVYC 302


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,140,691
Number of Sequences: 27780
Number of extensions: 237568
Number of successful extensions: 551
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)