Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30647
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D86741-2|BAA21841.1| 92|Caenorhabditis elegans ATP synthase su... 103 1e-22
D86740-2|BAA13165.1| 92|Caenorhabditis elegans ATP synthase su... 103 1e-22
AC090999-18|AAK26152.1| 116|Caenorhabditis elegans Hypothetical... 103 1e-22
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z70208-4|CAC42306.1| 879|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF200707-1|AAF15884.1| 879|Caenorhabditis elegans UNC-84B protein. 29 2.9
AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein. 29 2.9
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 3.8
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 3.8
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 3.8
Z72502-3|CAA96593.2| 218|Caenorhabditis elegans Hypothetical pr... 28 5.0
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 28 5.0
AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical ... 28 5.0
Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical pr... 27 8.7
U80023-2|AAG24035.1| 204|Caenorhabditis elegans Hypothetical pr... 27 8.7
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.7
AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.7
AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.7
AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.7
AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.7
AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.7
AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.7
AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.7
AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.7
AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.7
AF492691-1|AAM49743.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.7
AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.7
AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.7
AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.7
AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein. 27 8.7
AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm transme... 27 8.7
>D86741-2|BAA21841.1| 92|Caenorhabditis elegans ATP synthase
subunit protein.
Length = 92
Score = 103 bits (246), Expect = 1e-22
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +2
Query: 254 GVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMG 409
GVAGSGAGIG VFG+L+IGYARNPSLKQQLFSYAILGFALSEAMGLFCL MG
Sbjct: 34 GVAGSGAGIGNVFGALVIGYARNPSLKQQLFSYAILGFALSEAMGLFCLTMG 85
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +3
Query: 171 AVRSFQTTSVTKDIDSAAKFIGAGAAT 251
A R TT KDIDSAAK+IGAGAAT
Sbjct: 6 AARMISTTVARKDIDSAAKYIGAGAAT 32
>D86740-2|BAA13165.1| 92|Caenorhabditis elegans ATP synthase
subunit protein.
Length = 92
Score = 103 bits (246), Expect = 1e-22
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +2
Query: 254 GVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMG 409
GVAGSGAGIG VFG+L+IGYARNPSLKQQLFSYAILGFALSEAMGLFCL MG
Sbjct: 34 GVAGSGAGIGNVFGALVIGYARNPSLKQQLFSYAILGFALSEAMGLFCLTMG 85
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +3
Query: 171 AVRSFQTTSVTKDIDSAAKFIGAGAAT 251
A R TT KDIDSAAK+IGAGAAT
Sbjct: 6 AARMISTTVARKDIDSAAKYIGAGAAT 32
>AC090999-18|AAK26152.1| 116|Caenorhabditis elegans Hypothetical
protein Y82E9BR.3 protein.
Length = 116
Score = 103 bits (246), Expect = 1e-22
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +2
Query: 254 GVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMG 409
GVAGSGAGIG VFG+L+IGYARNPSLKQQLFSYAILGFALSEAMGLFCL MG
Sbjct: 58 GVAGSGAGIGNVFGALVIGYARNPSLKQQLFSYAILGFALSEAMGLFCLTMG 109
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +3
Query: 171 AVRSFQTTSVTKDIDSAAKFIGAGAAT 251
A R TT KDIDSAAK+IGAGAAT
Sbjct: 30 AARMISTTVARKDIDSAAKYIGAGAAT 56
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 31.5 bits (68), Expect = 0.54
Identities = 25/69 (36%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +2
Query: 68 CSQVCHLLQLCTGATTCSCTHPY-TDGTCCPYTALCSAVLPDHIGH*GH*LCCQIHWCWC 244
CSQ C C G TTC C Y +G CC L V I H + C C
Sbjct: 2148 CSQ-CDANAHCVGGTTCKCNPGYFGNGLCCVPDPL-DCVHFTGICHPNAVCNSESRQCQC 2205
Query: 245 SDSGVAGSG 271
S SG +G+G
Sbjct: 2206 S-SGFSGNG 2213
>Z70208-4|CAC42306.1| 879|Caenorhabditis elegans Hypothetical
protein F54B11.3b protein.
Length = 879
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1
Query: 294 PKTVPIPAPEPATPLSLHQ 238
PK +P+PAP PA P+ +HQ
Sbjct: 840 PKPIPVPAPTPA-PVIIHQ 857
>Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical
protein F54B11.3a protein.
Length = 1111
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1
Query: 294 PKTVPIPAPEPATPLSLHQ 238
PK +P+PAP PA P+ +HQ
Sbjct: 840 PKPIPVPAPTPA-PVIIHQ 857
>AF200707-1|AAF15884.1| 879|Caenorhabditis elegans UNC-84B protein.
Length = 879
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1
Query: 294 PKTVPIPAPEPATPLSLHQ 238
PK +P+PAP PA P+ +HQ
Sbjct: 840 PKPIPVPAPTPA-PVIIHQ 857
>AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein.
Length = 1111
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1
Query: 294 PKTVPIPAPEPATPLSLHQ 238
PK +P+PAP PA P+ +HQ
Sbjct: 840 PKPIPVPAPTPA-PVIIHQ 857
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 68 CSQVCHLLQLCTGATTCSCTHPYTDGTCCPYTALCSAVLPD 190
CS V H + G T C C Y DG +C A+L D
Sbjct: 2755 CSGVAHCIDRAVGYT-CKCPDGYIDGNPDEPGRVCGALLCD 2794
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 68 CSQVCHLLQLCTGATTCSCTHPYTDGTCCPYTALCSAVLPD 190
CS V H + G T C C Y DG +C A+L D
Sbjct: 3339 CSGVAHCIDRAVGYT-CKCPDGYIDGNPDEPGRVCGALLCD 3378
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 68 CSQVCHLLQLCTGATTCSCTHPYTDGTCCPYTALCSAVLPD 190
CS V H + G T C C Y DG +C A+L D
Sbjct: 2755 CSGVAHCIDRAVGYT-CKCPDGYIDGNPDEPGRVCGALLCD 2794
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 68 CSQVCHLLQLCTGATTCSCTHPYTDGTCCPYTALCSAVLPD 190
CS V H + G T C C Y DG +C A+L D
Sbjct: 3339 CSGVAHCIDRAVGYT-CKCPDGYIDGNPDEPGRVCGALLCD 3378
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 68 CSQVCHLLQLCTGATTCSCTHPYTDGTCCPYTALCSAVLPD 190
CS V H + G T C C Y DG +C A+L D
Sbjct: 3339 CSGVAHCIDRAVGYT-CKCPDGYIDGNPDEPGRVCGALLCD 3378
>Z72502-3|CAA96593.2| 218|Caenorhabditis elegans Hypothetical
protein C08B6.6 protein.
Length = 218
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 592 PVDAHCRCNTHQSLHHYEGEV 530
P+ CRCNT +LH EG V
Sbjct: 98 PIYVLCRCNTTNTLHRREGVV 118
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 11/57 (19%)
Frame = +2
Query: 44 VCRQTDRPC----SQVCHLLQLCTGATTC---SCT----HPYTDGTCCPYTALCSAV 181
+C+Q P C + + CTG TC CT H DG C P A S V
Sbjct: 1426 ICKQKSAPAFAAPGDTCSMREKCTGGATCFEGMCTCDDHHFAEDGYCRPIEARSSKV 1482
>AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical
protein C50D2.2 protein.
Length = 589
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 211 LTLLPNSLVLVQRQWSSWFRSWYWNSL 291
L+LL N+L++V W +W R W S+
Sbjct: 518 LSLLINTLMMVHLAWITWLRLVVWMSI 544
>Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 116 CSCTHPYTDGTCCPY 160
C CT+P TDG C Y
Sbjct: 348 CECTNPLTDGYYCEY 362
>Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 116 CSCTHPYTDGTCCPY 160
C CT+P TDG C Y
Sbjct: 348 CECTNPLTDGYYCEY 362
>U80023-2|AAG24035.1| 204|Caenorhabditis elegans Hypothetical
protein F07C4.6 protein.
Length = 204
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -3
Query: 286 CSNTSSGTSYSTVAAPAP-MNLAAESMSLVTDVVWKDRTAESCVGTAG 146
C ++YS AP P +N A+ + ++ + W+ AE C G
Sbjct: 105 CGLCCQTSTYSCQNAPFPRLNCASVTKAMCLSITWRQILAEDCPNFCG 152
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = -1
Query: 420 AAGTPIIRQNRPMASDKAKPRMAYENNCCLREGFLA*PMMREPKTV---PIPAPEPATPL 250
A TP++++ P A D AKP + ++ + P PK V P A PATP+
Sbjct: 457 AKKTPVLKRKEPAAKDTAKPATSKTPETPEKKDPVK-PRDSSPKKVAAKPDSAQAPATPV 515
Query: 249 S--LHQHQ*IWQQSQCP 205
+ + + W+ + P
Sbjct: 516 KNPVKKWRPPWEDDETP 532
>AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 116 CSCTHPYTDGTCCPY 160
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 116 CSCTHPYTDGTCCPY 160
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 116 CSCTHPYTDGTCCPY 160
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 116 CSCTHPYTDGTCCPY 160
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 116 CSCTHPYTDGTCCPY 160
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 116 CSCTHPYTDGTCCPY 160
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 116 CSCTHPYTDGTCCPY 160
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 116 CSCTHPYTDGTCCPY 160
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 116 CSCTHPYTDGTCCPY 160
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 116 CSCTHPYTDGTCCPY 160
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492691-1|AAM49743.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 116 CSCTHPYTDGTCCPY 160
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 116 CSCTHPYTDGTCCPY 160
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 116 CSCTHPYTDGTCCPY 160
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 116 CSCTHPYTDGTCCPY 160
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 116 CSCTHPYTDGTCCPY 160
C CT+P TDG C Y
Sbjct: 334 CECTNPLTDGYYCEY 348
>AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm
transmembrane protein protein.
Length = 661
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 116 CSCTHPYTDGTCCPY 160
C CT+P TDG C Y
Sbjct: 348 CECTNPLTDGYYCEY 362
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,533,297
Number of Sequences: 27780
Number of extensions: 386604
Number of successful extensions: 1575
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1571
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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