Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30647
(651 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 1.1
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 23 2.6
EF032397-1|ABM97933.1| 200|Apis mellifera arginine kinase protein. 22 4.5
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.9
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.9
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.9
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.9
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.9
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.9
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.9
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.9
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 21 7.8
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 24.2 bits (50), Expect = 1.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 54 WRQTAFCFYKVRRATTKN 1
W Q FC+++ AT KN
Sbjct: 533 WFQNTFCYFRRNAATWKN 550
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 23.0 bits (47), Expect = 2.6
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +1
Query: 379 GHGSVLSYDGRSCCSS-LSK-LFT-FKNTTTAILHMRFQCILSGVDTMESNVWKPHPHSD 549
G + S D +S LSK +F K T+ CI SG++ ++S V P ++
Sbjct: 13 GFSKLSSSDSKSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAE 72
Query: 550 ART 558
A T
Sbjct: 73 AYT 75
>EF032397-1|ABM97933.1| 200|Apis mellifera arginine kinase protein.
Length = 200
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 448 KNTTTAILHMRFQCILSGVDTMESNVWKPHPHSDART 558
K T+ CI SG++ ++S V P ++A T
Sbjct: 23 KTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYT 59
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 1 VLCCRAPHLI 30
V+ CRAPH+I
Sbjct: 450 VILCRAPHII 459
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 1 VLCCRAPHLI 30
V+ CRAPH+I
Sbjct: 450 VILCRAPHII 459
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 1 VLCCRAPHLI 30
V+ CRAPH+I
Sbjct: 450 VILCRAPHII 459
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 1 VLCCRAPHLI 30
V+ CRAPH+I
Sbjct: 450 VILCRAPHII 459
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 1 VLCCRAPHLI 30
V+ CRAPH+I
Sbjct: 450 VILCRAPHII 459
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 1 VLCCRAPHLI 30
V+ CRAPH+I
Sbjct: 450 VILCRAPHII 459
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 1 VLCCRAPHLI 30
V+ CRAPH+I
Sbjct: 518 VILCRAPHII 527
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 1 VLCCRAPHLI 30
V+ CRAPH+I
Sbjct: 518 VILCRAPHII 527
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +1
Query: 148 LLSLHSSLQCGPSRPHRSLRTLTLLPNS 231
+L ++ L C + +S+R +T LP++
Sbjct: 208 MLGIYCRLYCYAQKHVKSIRAVTKLPDT 235
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,800
Number of Sequences: 438
Number of extensions: 4827
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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