Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30645
         (344 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   1.8  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   4.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   7.2  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    20   7.2  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    20   9.5  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 207 YCTPVFFIPYLFAGIGYYR 151
           +  P+F   ++F+ IGYY+
Sbjct: 57  FSLPIFGTRWIFSCIGYYK 75


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -3

Query: 165 IGYYRYARAGRELTGSNSEEISNTSP 88
           +GYY+  +     T S   EIS   P
Sbjct: 2   VGYYQMKQITNSTTMSVKNEISTVEP 27


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 70  AKSTTGSESRPTEKTRRETQ 11
           A  TTG+ + PT + R+  Q
Sbjct: 252 AAMTTGTTTIPTRRLRKRRQ 271


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 274 NIEFKYVLLKKVKRNTPNEFKILLHSCF 191
           ++E   V  + +  +T   F + LHSCF
Sbjct: 27  DVECTMVEKRVLALSTKPPFLVQLHSCF 54


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 156 NSRFQRIGRE 185
           NS F+R+GRE
Sbjct: 202 NSEFRRMGRE 211


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,369
Number of Sequences: 438
Number of extensions: 986
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7812315
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)