Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30644
(672 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 125 6e-29
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 125 6e-29
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 125 6e-29
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 86 4e-17
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 86 4e-17
AY118688-1|AAM50548.1| 709|Drosophila melanogaster AT15442p pro... 29 5.8
AE014298-3210|AAF50936.1| 709|Drosophila melanogaster CG12446-P... 29 5.8
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 125 bits (301), Expect = 6e-29
Identities = 57/115 (49%), Positives = 78/115 (67%)
Frame = +1
Query: 256 YKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPG 435
YKSQR RAG+G MR+RRRI R+GPL++++KD+GL +AFRNIPG+E APG
Sbjct: 187 YKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNVLKLAPG 246
Query: 436 GHLGRFVIWTQSAFGRLDPLFGSWRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRS 600
GH+GRFVIWT+SAF RL+ LFG+W+ ++ P P + + S L++S
Sbjct: 247 GHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQ---PKMANTDLSRLLKS 298
Score = 86.2 bits (204), Expect = 4e-17
Identities = 38/59 (64%), Positives = 51/59 (86%)
Frame = +2
Query: 77 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 253
L ++AA+GVPALVQ++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI K
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQK 185
Score = 76.6 bits (180), Expect = 3e-14
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = +3
Query: 492 LIRVMETPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATGKLKPV 662
L + PS KK +NLPQPKMANTDL+RLLKS+EIRKVLR P KRV R+ +L P+
Sbjct: 266 LFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPL 322
Score = 33.1 bits (72), Expect = 0.35
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3
Query: 3 GRMFAPTKPWRRWH 44
GRMFAPTK +RRWH
Sbjct: 102 GRMFAPTKTFRRWH 115
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 125 bits (301), Expect = 6e-29
Identities = 57/115 (49%), Positives = 78/115 (67%)
Frame = +1
Query: 256 YKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPG 435
YKSQR RAG+G MR+RRRI R+GPL++++KD+GL +AFRNIPG+E APG
Sbjct: 187 YKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPG 246
Query: 436 GHLGRFVIWTQSAFGRLDPLFGSWRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRS 600
GH+GRFVIWT+SAF RL+ LFG+W+ ++ P P + + S L++S
Sbjct: 247 GHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQ---PKMANTDLSRLLKS 298
Score = 86.2 bits (204), Expect = 4e-17
Identities = 38/59 (64%), Positives = 51/59 (86%)
Frame = +2
Query: 77 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 253
L ++AA+GVPALVQ++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI K
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQK 185
Score = 76.6 bits (180), Expect = 3e-14
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = +3
Query: 492 LIRVMETPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATGKLKPV 662
L + PS KK +NLPQPKMANTDL+RLLKS+EIRKVLR P KRV R+ +L P+
Sbjct: 266 LFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPL 322
Score = 33.1 bits (72), Expect = 0.35
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3
Query: 3 GRMFAPTKPWRRWH 44
GRMFAPTK +RRWH
Sbjct: 102 GRMFAPTKTFRRWH 115
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 125 bits (301), Expect = 6e-29
Identities = 57/115 (49%), Positives = 78/115 (67%)
Frame = +1
Query: 256 YKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPG 435
YKSQR RAG+G MR+RRRI R+GPL++++KD+GL +AFRNIPG+E APG
Sbjct: 187 YKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPG 246
Query: 436 GHLGRFVIWTQSAFGRLDPLFGSWRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRS 600
GH+GRFVIWT+SAF RL+ LFG+W+ ++ P P + + S L++S
Sbjct: 247 GHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQ---PKMANTDLSRLLKS 298
Score = 86.2 bits (204), Expect = 4e-17
Identities = 38/59 (64%), Positives = 51/59 (86%)
Frame = +2
Query: 77 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 253
L ++AA+GVPALVQ++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI K
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQK 185
Score = 76.6 bits (180), Expect = 3e-14
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = +3
Query: 492 LIRVMETPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATGKLKPV 662
L + PS KK +NLPQPKMANTDL+RLLKS+EIRKVLR P KRV R+ +L P+
Sbjct: 266 LFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPL 322
Score = 33.1 bits (72), Expect = 0.35
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3
Query: 3 GRMFAPTKPWRRWH 44
GRMFAPTK +RRWH
Sbjct: 102 GRMFAPTKTFRRWH 115
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 86.2 bits (204), Expect = 4e-17
Identities = 38/59 (64%), Positives = 51/59 (86%)
Frame = +2
Query: 77 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 253
L ++AA+GVPALVQ++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI K
Sbjct: 65 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQK 123
Score = 33.1 bits (72), Expect = 0.35
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3
Query: 3 GRMFAPTKPWRRWH 44
GRMFAPTK +RRWH
Sbjct: 40 GRMFAPTKTFRRWH 53
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 86.2 bits (204), Expect = 4e-17
Identities = 38/59 (64%), Positives = 51/59 (86%)
Frame = +2
Query: 77 LGGSVAATGVPALVQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 253
L ++AA+GVPALVQ++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI K
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQK 185
Score = 71.3 bits (167), Expect = 1e-12
Identities = 29/42 (69%), Positives = 38/42 (90%)
Frame = +1
Query: 256 YKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIP 381
YKSQR RAG+G MR+RRRI R+GPL++++KD+GL +AFRNIP
Sbjct: 187 YKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIP 228
Score = 33.1 bits (72), Expect = 0.35
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3
Query: 3 GRMFAPTKPWRRWH 44
GRMFAPTK +RRWH
Sbjct: 102 GRMFAPTKTFRRWH 115
>AY118688-1|AAM50548.1| 709|Drosophila melanogaster AT15442p
protein.
Length = 709
Score = 29.1 bits (62), Expect = 5.8
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -3
Query: 307 DDGCAFYPYQHEDAETCTLKDIRPCLEAPQEDDSLFGLVDLLDFVGYNQGK 155
D G P H A TC +PCL+ P++D F VD G QG+
Sbjct: 150 DWGVGDRPGTHVSALTCLETRAKPCLQVPRQDHDNF--VDQHQEHGEGQGQ 198
>AE014298-3210|AAF50936.1| 709|Drosophila melanogaster CG12446-PA
protein.
Length = 709
Score = 29.1 bits (62), Expect = 5.8
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -3
Query: 307 DDGCAFYPYQHEDAETCTLKDIRPCLEAPQEDDSLFGLVDLLDFVGYNQGK 155
D G P H A TC +PCL+ P++D F VD G QG+
Sbjct: 150 DWGVGDRPGTHVSALTCLETRAKPCLQVPRQDHDNF--VDQHQEHGEGQGQ 198
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,592,513
Number of Sequences: 53049
Number of extensions: 662791
Number of successful extensions: 2189
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2189
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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