Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30644
         (672 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    29   0.053
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    25   0.50 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.6  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   4.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   8.1  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 28.7 bits (61), Expect = 0.053
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 540 LPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATGKLK 656
           LP P   N  L  L+ S E+R+  +APN  V    G+L+
Sbjct: 490 LPPPYRLNKPLMSLITSSEVRQPGKAPNYSVNWTIGQLE 528


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 59  EVDATVPAPPGLRGGEHT 6
           ++D  +P PP +RGGE T
Sbjct: 370 DLDEPLPPPPPIRGGEWT 387


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 463  TQSAFGRLDPLFGSWRHHRNKRRTST 540
            + S  GRLD    +W +H N  +  T
Sbjct: 1663 SDSESGRLDTEMSTWGYHHNVNKHCT 1688


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 13  SPPRSPGGAGT 45
           SPPR PGG  T
Sbjct: 397 SPPRGPGGVPT 407


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -2

Query: 620 GSTEDLPDLIRLEKTCEVSVGHLWLG 543
           GS +++  ++R  K C  +    W+G
Sbjct: 349 GSDQEVAGVMRAVKRCNATGAFSWIG 374


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,049
Number of Sequences: 438
Number of extensions: 3666
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)