Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30635
(724 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386... 145 3e-35
06_03_1052 - 27217792-27217846,27218025-27218114,27218191-272182... 144 6e-35
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 135 4e-32
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151... 128 4e-30
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 119 3e-27
04_04_0120 + 22911863-22911904,22912002-22912112,22912212-229127... 103 1e-22
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 90 1e-18
07_03_1666 + 28482262-28482385,28482475-28482992 29 3.7
04_04_0678 + 27207340-27207447,27207555-27207668,27209111-272093... 29 3.7
04_01_0279 + 3743025-3745169 29 4.9
12_01_0935 - 9277421-9277584,9277908-9278111,9280742-9280982,928... 28 6.5
12_01_0941 - 9316051-9316056,9316747-9317082 28 8.6
12_01_0937 - 9289999-9290046,9290123-9290458 28 8.6
08_02_1628 + 28363476-28363517,28363624-28363791,28363863-283639... 28 8.6
>02_01_0533 +
3868230-3868564,3869040-3869098,3869187-3869225,
3869629-3869729,3870288-3870400,3870976-3871075,
3871170-3871316,3871442-3871502,3871616-3871713,
3871786-3871928,3872221-3872304,3872389-3872478,
3872574-3872628
Length = 474
Score = 145 bits (352), Expect = 3e-35
Identities = 66/88 (75%), Positives = 77/88 (87%)
Frame = +1
Query: 259 VFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFVVGV 438
+ S+RDP IPWG GAEYVVES+GVFTTT+KASAHL+GGAKKV+ISAPSADAPMFVVGV
Sbjct: 212 ITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVVISAPSADAPMFVVGV 271
Query: 439 NLEAYDPSFKVISNASCTTNCLAHLQRL 522
N ++YDP V+SNASCTTNCLA L ++
Sbjct: 272 NEKSYDPKMNVVSNASCTTNCLAPLAKV 299
Score = 98.3 bits (234), Expect = 5e-21
Identities = 48/72 (66%), Positives = 52/72 (72%)
Frame = +3
Query: 507 PLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVG 686
PLAKV+H+ F IVEGLM DGPS K WR GRGA QNIIP+STGAAKAVG
Sbjct: 295 PLAKVVHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVG 354
Query: 687 KVIPALNGKLTG 722
KV+P LNGKLTG
Sbjct: 355 KVLPELNGKLTG 366
Score = 95.9 bits (228), Expect = 3e-20
Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Frame = +2
Query: 47 SKIGINGFGRIGRLVLR-ASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVE-V 220
+K+GINGFGRIGRLVLR A+ +VVA+NDPFI YM Y+FKYDSTHG FKGS++ V
Sbjct: 139 TKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGSIKVV 198
Query: 221 QDGFLVVNGNKMPFSQK 271
D L +NG K+ + K
Sbjct: 199 DDSTLEINGKKVTITSK 215
>06_03_1052 -
27217792-27217846,27218025-27218114,27218191-27218274,
27218526-27218668,27218748-27218845,27218959-27219019,
27219184-27219330,27219428-27219527,27219701-27219813,
27220302-27220402,27220614-27220652,27220739-27220797,
27221027-27221088,27221411-27221506
Length = 415
Score = 144 bits (349), Expect = 6e-35
Identities = 66/89 (74%), Positives = 78/89 (87%)
Frame = +1
Query: 256 AVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFVVG 435
+V S+RDP IPWG GAEYVVES+GVFTTT+KASAHL+GGA+KV+ISAPSADAPMFVVG
Sbjct: 152 SVTSKRDPSDIPWGNFGAEYVVESSGVFTTTEKASAHLKGGARKVVISAPSADAPMFVVG 211
Query: 436 VNLEAYDPSFKVISNASCTTNCLAHLQRL 522
VN + Y+PS V+SNASCTTNCLA L ++
Sbjct: 212 VNEKNYNPSMNVVSNASCTTNCLAPLAKI 240
Score = 98.7 bits (235), Expect = 4e-21
Identities = 47/72 (65%), Positives = 52/72 (72%)
Frame = +3
Query: 507 PLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVG 686
PLAK++H+ F I EGLM DGPS K WR GRGA QNIIP+STGAAKAVG
Sbjct: 236 PLAKIVHEEFGIAEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVG 295
Query: 687 KVIPALNGKLTG 722
KV+PALNGKLTG
Sbjct: 296 KVLPALNGKLTG 307
Score = 93.1 bits (221), Expect = 2e-19
Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Frame = +2
Query: 47 SKIGINGFGRIGRLVLRASIEKG-AQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 223
+K+GINGFGRIGRLVLR + + +VVA+NDPFI YM Y+FKYDSTHG FKG+++V
Sbjct: 80 TKVGINGFGRIGRLVLRIATNRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGTIKVV 139
Query: 224 D-GFLVVNGNKMPFSQK 271
D L +NG K+ + K
Sbjct: 140 DESTLEINGKKISVTSK 156
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 135 bits (326), Expect = 4e-32
Identities = 61/88 (69%), Positives = 73/88 (82%)
Frame = +1
Query: 259 VFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFVVGV 438
VF R+P+ IPWG+ GAE+VVESTGVFT DKA+AHL+GGAKKV+ISAPS DAPMFVVGV
Sbjct: 126 VFGCRNPEEIPWGETGAEFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGV 185
Query: 439 NLEAYDPSFKVISNASCTTNCLAHLQRL 522
N + Y P ++SNASCTTNCLA L ++
Sbjct: 186 NEKEYKPDIDIVSNASCTTNCLAPLAKV 213
Score = 95.5 bits (227), Expect = 4e-20
Identities = 48/72 (66%), Positives = 51/72 (70%)
Frame = +3
Query: 507 PLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVG 686
PLAKVI+D F IVEGLM DGPS K WR GR A NIIP+STGAAKAVG
Sbjct: 209 PLAKVINDRFGIVEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVG 268
Query: 687 KVIPALNGKLTG 722
KV+PALNGKLTG
Sbjct: 269 KVLPALNGKLTG 280
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/43 (60%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +2
Query: 50 KIGINGFGRIGRLVLRASIEK-GAQVVAINDPFIGLDYMVYLF 175
KIGINGFGRIGRLV R +++ ++VA+NDPFI DYM+ F
Sbjct: 5 KIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMICEF 47
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 161 MVYLFKYDSTHGRFK-GSVEVQDGFLVVNGNK 253
+ Y+FKYD+ HG++K V+V+D ++ G K
Sbjct: 91 VTYMFKYDTVHGQWKHHEVKVKDSKTLLFGEK 122
>08_01_0179 +
1519141-1519144,1519278-1519301,1519417-1519517,
1519805-1519920,1519944-1520112,1520713-1520859,
1520943-1521003,1521086-1521183,1521608-1521750,
1521980-1522063,1522191-1522280,1522375-1522420
Length = 360
Score = 128 bits (309), Expect = 4e-30
Identities = 58/85 (68%), Positives = 69/85 (81%)
Frame = +1
Query: 268 ERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFVVGVNLE 447
ER+P IPW +AGAEYVVESTGVFT +KA+AHL+GGAKKV+ISAPS DAPMFV GVN +
Sbjct: 104 ERNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNED 163
Query: 448 AYDPSFKVISNASCTTNCLAHLQRL 522
Y ++SNASCTTNCLA L ++
Sbjct: 164 KYTSDIDIVSNASCTTNCLAPLAKV 188
Score = 97.9 bits (233), Expect = 7e-21
Identities = 48/72 (66%), Positives = 51/72 (70%)
Frame = +3
Query: 507 PLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVG 686
PLAKVIHDNF I+EGLM DGPS K WR GR A NIIP+STGAAKAVG
Sbjct: 184 PLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVG 243
Query: 687 KVIPALNGKLTG 722
KV+P LNGKLTG
Sbjct: 244 KVLPDLNGKLTG 255
Score = 81.8 bits (193), Expect = 5e-16
Identities = 37/70 (52%), Positives = 54/70 (77%), Gaps = 2/70 (2%)
Frame = +2
Query: 50 KIGINGFGRIGRLVLRASIE-KGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGS-VEVQ 223
KIGINGFGRIGRLV R +++ + ++VA+NDPFI DYM Y+FKYD+ HG++K S ++++
Sbjct: 5 KIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIK 64
Query: 224 DGFLVVNGNK 253
D ++ G K
Sbjct: 65 DSKTLLLGEK 74
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 119 bits (286), Expect = 3e-27
Identities = 62/103 (60%), Positives = 72/103 (69%), Gaps = 14/103 (13%)
Frame = +1
Query: 256 AVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHL--------------EGGAKKVI 393
AVF R+P+ IPW AGAEYVVESTGVFT DKA+AHL +GGAKKV+
Sbjct: 82 AVFGCRNPEEIPWAAAGAEYVVESTGVFTDKDKAAAHLKGQAVDLFSIIFHMQGGAKKVV 141
Query: 394 ISAPSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAHLQRL 522
ISAPS DAPMFVVGVN + Y ++SNASCTTNCLA L ++
Sbjct: 142 ISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKV 184
Score = 94.3 bits (224), Expect = 9e-20
Identities = 48/72 (66%), Positives = 51/72 (70%)
Frame = +3
Query: 507 PLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVG 686
PLAKVI+D F IVEGLM DGPS K WR GR A NIIP+STGAAKAVG
Sbjct: 180 PLAKVINDRFGIVEGLMTTVHAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVG 239
Query: 687 KVIPALNGKLTG 722
KV+PALNGKLTG
Sbjct: 240 KVLPALNGKLTG 251
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 2/65 (3%)
Frame = +2
Query: 65 GFGRIGRLVLRASIE-KGAQVVAINDPFIGLDYMVYLFKYDSTHGRFK-GSVEVQDGFLV 238
GFGRIGRLV R +++ + ++VA+NDPFI +YM Y+FKYD+ HG++K V+V+D +
Sbjct: 15 GFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHEVKVKDSKTL 74
Query: 239 VNGNK 253
+ G K
Sbjct: 75 IFGTK 79
>04_04_0120 +
22911863-22911904,22912002-22912112,22912212-22912764,
22912852-22913354
Length = 402
Score = 103 bits (248), Expect = 1e-22
Identities = 46/84 (54%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 VFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAP-SADAPMFVVG 435
V S+R+P +PWG+ G + V+E TGVF D A H++ GAKKV+I+AP D P +VVG
Sbjct: 142 VVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGKGDIPTYVVG 201
Query: 436 VNLEAYDPSFKVISNASCTTNCLA 507
VN + Y P +ISNASCTTNCLA
Sbjct: 202 VNADQYSPDEPIISNASCTTNCLA 225
Score = 51.6 bits (118), Expect = 6e-07
Identities = 29/72 (40%), Positives = 35/72 (48%)
Frame = +3
Query: 507 PLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVG 686
P K++ F I++G M D L R R A NI+P STGAAKAV
Sbjct: 226 PFVKILDQKFGIIKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVPTSTGAAKAVA 284
Query: 687 KVIPALNGKLTG 722
V+P L GKL G
Sbjct: 285 LVLPNLKGKLNG 296
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/71 (45%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Frame = +2
Query: 50 KIGINGFGRIGRLVLRASIEKG----AQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVE 217
K+ INGFGRIGR LR +G V+AIND G+ +L KYDST G F V+
Sbjct: 68 KVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDADVK 126
Query: 218 -VQDGFLVVNG 247
V D + V+G
Sbjct: 127 PVGDNAISVDG 137
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 90.2 bits (214), Expect = 1e-18
Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Frame = +1
Query: 259 VFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPS--ADAPMFVV 432
V S RDP +PW + G + V+E TGVF A H++ GAKKVII+AP+ AD P +V+
Sbjct: 152 VVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVL 211
Query: 433 GVNLEAYDPSF-KVISNASCTTNCLA 507
GVN Y +ISNASCTTNCLA
Sbjct: 212 GVNEGDYSHEVANIISNASCTTNCLA 237
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/72 (41%), Positives = 36/72 (50%)
Frame = +3
Query: 507 PLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVG 686
P K++ + F IV+G M D L R R A NI+P STGAAKAV
Sbjct: 238 PFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVPTSTGAAKAVA 296
Query: 687 KVIPALNGKLTG 722
V+P L GKL G
Sbjct: 297 LVLPQLKGKLNG 308
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +2
Query: 35 ADNMSKIGINGFGRIGRLVLRASIEK---GAQVVAINDPFIGLDYMVYLFKYDSTHGRFK 205
A+ K+ INGFGRIGR LR E+ +VV +ND G+ +L KYDS G FK
Sbjct: 74 AEAKLKVAINGFGRIGRNFLRCWHERENSPLEVVVVNDSG-GVRNASHLLKYDSMLGTFK 132
Query: 206 GSVEVQD 226
V++ D
Sbjct: 133 ADVKIVD 139
>07_03_1666 + 28482262-28482385,28482475-28482992
Length = 213
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -3
Query: 440 LTPTTNMGASALGADIITFLAPPSK*ADALSVVVKTPVDSTTYSAPAFPHG 288
+T + MG+ G+ + + PP + S+ TT AP PHG
Sbjct: 81 VTSSEMMGSLMSGSGRVAVITPPPAASGGASLPAAAAAGGTTLVAPVVPHG 131
>04_04_0678 +
27207340-27207447,27207555-27207668,27209111-27209332,
27209407-27209481,27209569-27209685,27210145-27210395,
27210686-27210761,27210862-27210948,27211037-27211222
Length = 411
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 59 INGFGRIGRLVLRASIEKGAQVVAIND 139
I GFG +G R EKG +V+A+ D
Sbjct: 211 IQGFGNVGSWAARIIHEKGGKVIALGD 237
>04_01_0279 + 3743025-3745169
Length = 714
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 90 CSVLLLKRELKWSL*MTLSSVLTIWFIFS-SMIPPMAVLRAVLRFRMD 230
C V+ ++ L + + T ++V+ WF F+ ++ P+AV A+ FR++
Sbjct: 240 CRVVEMELSLMYDILYTKAAVMHTWFGFAIRVVSPLAVAAALGLFRLE 287
>12_01_0935 -
9277421-9277584,9277908-9278111,9280742-9280982,
9282165-9282494
Length = 312
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 59 INGFGRIGRLVLRASIEKGAQVVAINDPFIGLD 157
+ G G IGR ++ AS+ +G + P IGLD
Sbjct: 9 VGGTGYIGRRIVAASLAEGHPTFVLLRPEIGLD 41
>12_01_0941 - 9316051-9316056,9316747-9317082
Length = 113
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +2
Query: 59 INGFGRIGRLVLRASIEKGAQVVAINDPFIGL--DYMVYLFKYDSTHGR-FKGSVEVQDG 229
+ G G IGR ++ AS+ +G + P IGL D + L + + R + S++ DG
Sbjct: 11 VGGSGYIGRRIVAASLAEGHPTFVLLRPEIGLNIDKLQILLAFKAQGARLLEASLDDHDG 70
Query: 230 FL 235
+
Sbjct: 71 LV 72
>12_01_0937 - 9289999-9290046,9290123-9290458
Length = 127
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 59 INGFGRIGRLVLRASIEKGAQVVAINDPFIGLD 157
+ G G IGR ++ AS+ G + P IGLD
Sbjct: 11 VGGTGHIGRRIVAASLAAGHPTSVLLRPEIGLD 43
>08_02_1628 +
28363476-28363517,28363624-28363791,28363863-28363937,
28364018-28364070,28364559-28364709,28365079-28365261,
28366110-28366236,28366731-28366831,28367156-28367294,
28367359-28367420,28367702-28367754,28368266-28368290
Length = 392
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -3
Query: 449 ASRLTPTTNMGASALGADIITFLAPPSK*ADALSVVVKTPV 327
+ L TT G + +GA + F++ PSK SVVV V
Sbjct: 327 SEELIDTTGAGDAFIGAVLYAFVSGPSKFCSVKSVVVNLAV 367
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,116,672
Number of Sequences: 37544
Number of extensions: 459056
Number of successful extensions: 1104
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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