Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30631
         (423 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   1.4  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   4.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   5.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   5.7  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   7.5  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   7.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    20   10.0 

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 223 RKENGQVVYCHRYI 182
           RKENG+   CH Y+
Sbjct: 169 RKENGKEFDCHNYM 182


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = -1

Query: 360 ISYKLIIGSAAYEHFYCLLRNVRACR*LAVSARDAGRPVLV*RYVKGKRTDKLYTAI 190
           I Y++      +  F   L+N R C  LA S  +   P  +  Y  G+R +  Y A+
Sbjct: 171 IEYRIPKSGKGFSLFARFLKNPRPCNVLATSLTE---PYTLRNY--GRRINCTYVAL 222


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 9   LNDYCNAWNYLLYIS 53
           LNDY N  NY  +++
Sbjct: 125 LNDYINRLNYSAFVN 139


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 108 RVGGRVPGRPQH 143
           RVG R PGR  H
Sbjct: 364 RVGTRYPGRADH 375


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 60  DYN*YIINNSKHYNNHSN 7
           +YN Y  N + +YNN+ N
Sbjct: 93  NYNNYNNNYNNNYNNNYN 110


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 60  DYN*YIINNSKHYNNHSN 7
           +YN Y  N + +YNN+ N
Sbjct: 93  NYNNYNNNYNNNYNNNYN 110


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 15  DYCNAWNYLLYISCSRGPGVDTRAS 89
           D C+   Y L  + +   G+DTR S
Sbjct: 308 DLCDVQRYNLLETIATHMGLDTRTS 332


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,258
Number of Sequences: 438
Number of extensions: 2320
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)