Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30630
         (640 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46787-13|CAA86748.1|  281|Caenorhabditis elegans Hypothetical p...   114   6e-26
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr...    31   0.70 
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr...    31   0.70 
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr...    31   0.70 
U40938-2|AAQ65206.1|  463|Caenorhabditis elegans Hypothetical pr...    28   4.9  
U40938-1|AAA81695.2|  465|Caenorhabditis elegans Hypothetical pr...    28   4.9  
U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AF003132-1|AAB54133.3|  798|Caenorhabditis elegans Hypothetical ...    27   8.6  

>Z46787-13|CAA86748.1|  281|Caenorhabditis elegans Hypothetical
           protein C16C10.10 protein.
          Length = 281

 Score =  114 bits (274), Expect = 6e-26
 Identities = 46/79 (58%), Positives = 58/79 (73%)
 Frame = +2

Query: 260 ILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGYGPEDTHFVVELTYNYGVTHYEQGND 439
           +L MKVLRHEEF +GCEA CNGPY  RWSKTM+GYG ED HFV+E+TYNY +  YE GND
Sbjct: 25  VLNMKVLRHEEFEKGCEATCNGPYNGRWSKTMIGYGSEDEHFVLEITYNYPIHKYELGND 84

Query: 440 FLGITVQSSESLKRAQTNN 496
           +  I + S +  ++ +  N
Sbjct: 85  YRAIVIDSDQLFEKVEKIN 103



 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 189 VSGRALHFVFKVADRTLTAKFY 254
           ++ RALH+VFKVA+R  T  F+
Sbjct: 1   MTARALHYVFKVANRAKTIDFF 22


>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
            W06A7.3f protein.
          Length = 2488

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +2

Query: 380  HFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTN 493
            H +++L +N    H + GND++    +SSE  ++A  N
Sbjct: 1414 HKIIDLHFNIPKDHEDYGNDYVPFGTESSEESQKADGN 1451


>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
            W06A7.3c protein.
          Length = 2484

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +2

Query: 380  HFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTN 493
            H +++L +N    H + GND++    +SSE  ++A  N
Sbjct: 1414 HKIIDLHFNIPKDHEDYGNDYVPFGTESSEESQKADGN 1451


>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
            W06A7.3a protein.
          Length = 2607

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +2

Query: 380  HFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTN 493
            H +++L +N    H + GND++    +SSE  ++A  N
Sbjct: 1414 HKIIDLHFNIPKDHEDYGNDYVPFGTESSEESQKADGN 1451


>U40938-2|AAQ65206.1|  463|Caenorhabditis elegans Hypothetical
           protein D1009.3b protein.
          Length = 463

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +2

Query: 275 VLRHEEFSEGCEAACNGPYANRW-SKTMVGYGPEDTHFVVELT 400
           +LR E   E C+  C+  +AN W  +  V +G +   + +++T
Sbjct: 307 ILRIEIQGETCDLTCSKRFANTWVGEWKVNFGKKQDGYKIQIT 349


>U40938-1|AAA81695.2|  465|Caenorhabditis elegans Hypothetical
           protein D1009.3a protein.
          Length = 465

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +2

Query: 275 VLRHEEFSEGCEAACNGPYANRW-SKTMVGYGPEDTHFVVELT 400
           +LR E   E C+  C+  +AN W  +  V +G +   + +++T
Sbjct: 309 ILRIEIQGETCDLTCSKRFANTWVGEWKVNFGKKQDGYKIQIT 351


>U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical
           protein F21H12.6 protein.
          Length = 1374

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = +2

Query: 323 GPYANRWSKTMVGYGPEDTHFVVELTYNYG--VTHYEQGNDFLGITVQSSESLKRAQTNN 496
           GP  N WSK++   G +     V   ++ G      +   DF G+   +S SL    TN 
Sbjct: 766 GPIGNEWSKSITVQGGKTLEACVVRAWSRGKNPVDVDMTIDFFGVKKPTSISLIHGATNT 825

Query: 497 WPIK 508
            PI+
Sbjct: 826 -PIR 828


>AF003132-1|AAB54133.3|  798|Caenorhabditis elegans Hypothetical
           protein F37E3.1 protein.
          Length = 798

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -1

Query: 565 LQYRICNHQEPQHTSDHYVFNWPVVSLRPLQ 473
           LQ+ + + Q P+HTSD  ++ +P+V  R  Q
Sbjct: 265 LQHNLPSFQSPEHTSD-MIYPYPLVVFRLFQ 294


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,853,602
Number of Sequences: 27780
Number of extensions: 313994
Number of successful extensions: 740
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)