Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30620
         (658 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032542-1|AAH32542.2| 1084|Homo sapiens fucokinase protein.           31   3.6  
BC013735-1|AAH13735.1| 1032|Homo sapiens FUK protein protein.          31   3.6  
AY829643-1|AAV67949.1| 1084|Homo sapiens fucokinase protein.           31   3.6  
AK128387-1|BAC87413.1| 1090|Homo sapiens protein ( Homo sapiens ...    31   3.6  
AK096727-1|BAC04852.1|  813|Homo sapiens protein ( Homo sapiens ...    31   3.6  
AK056456-1|BAB71190.1|  990|Homo sapiens protein ( Homo sapiens ...    31   3.6  
AJ441184-1|CAD29647.1|  990|Homo sapiens L-fucose kinase protein.      31   3.6  

>BC032542-1|AAH32542.2| 1084|Homo sapiens fucokinase protein.
          Length = 1084

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 186 QVYPTAHPKREHRYKPRDFLVSQIGEXFRKTGGVLLTAWNTSWRL 320
           +++P  HP RE    P+D L        ++ GG  L AW  SWRL
Sbjct: 489 RLFPVLHPSRE--LGPQDLLWML---DHQEDGGEALRAWRASWRL 528


>BC013735-1|AAH13735.1| 1032|Homo sapiens FUK protein protein.
          Length = 1032

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 186 QVYPTAHPKREHRYKPRDFLVSQIGEXFRKTGGVLLTAWNTSWRL 320
           +++P  HP RE    P+D L        ++ GG  L AW  SWRL
Sbjct: 437 RLFPVLHPSRE--LGPQDLLWML---DHQEDGGEALRAWRASWRL 476


>AY829643-1|AAV67949.1| 1084|Homo sapiens fucokinase protein.
          Length = 1084

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 186 QVYPTAHPKREHRYKPRDFLVSQIGEXFRKTGGVLLTAWNTSWRL 320
           +++P  HP RE    P+D L        ++ GG  L AW  SWRL
Sbjct: 489 RLFPVLHPSRE--LGPQDLLWML---DHQEDGGEALRAWRASWRL 528


>AK128387-1|BAC87413.1| 1090|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46530 fis, clone THYMU3036200. ).
          Length = 1090

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 186 QVYPTAHPKREHRYKPRDFLVSQIGEXFRKTGGVLLTAWNTSWRL 320
           +++P  HP RE    P+D L        ++ GG  L AW  SWRL
Sbjct: 521 RLFPVLHPSRE--LGPQDLLWML---DHQEDGGEALRAWRASWRL 560


>AK096727-1|BAC04852.1|  813|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39408 fis, clone PLACE6013672. ).
          Length = 813

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 186 QVYPTAHPKREHRYKPRDFLVSQIGEXFRKTGGVLLTAWNTSWRL 320
           +++P  HP RE    P+D L        ++ GG  L AW  SWRL
Sbjct: 218 RLFPVLHPSRE--LGPQDLLWML---DHQEDGGEALRAWRASWRL 257


>AK056456-1|BAB71190.1|  990|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31894 fis, clone NT2RP7003647. ).
          Length = 990

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 186 QVYPTAHPKREHRYKPRDFLVSQIGEXFRKTGGVLLTAWNTSWRL 320
           +++P  HP RE    P+D L        ++ GG  L AW  SWRL
Sbjct: 395 RLFPVLHPSRE--LGPQDLLWML---DHQEDGGEALRAWRASWRL 434


>AJ441184-1|CAD29647.1|  990|Homo sapiens L-fucose kinase protein.
          Length = 990

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 186 QVYPTAHPKREHRYKPRDFLVSQIGEXFRKTGGVLLTAWNTSWRL 320
           +++P  HP RE    P+D L        ++ GG  L AW  SWRL
Sbjct: 395 RLFPVLHPSRE--LGPQDLLWML---DHQEDGGEALRAWRASWRL 434


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,546,916
Number of Sequences: 237096
Number of extensions: 1882466
Number of successful extensions: 3737
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3737
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)