Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30611
(408 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79238-1|CAA55820.1| 115|Homo sapiens ribosomal protein L30 pro... 135 6e-32
L05095-1|AAC15858.1| 115|Homo sapiens ribosomal protein L30 pro... 135 6e-32
BC095426-1|AAH95426.1| 115|Homo sapiens ribosomal protein L30 p... 135 6e-32
BC032700-1|AAH32700.1| 115|Homo sapiens ribosomal protein L30 p... 135 6e-32
AB070559-1|BAB79491.1| 115|Homo sapiens ribosomal protein L30 p... 135 6e-32
X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein. 34 0.16
U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor... 34 0.16
BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation ... 34 0.16
BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation ... 34 0.16
BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein. 34 0.16
AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein. 34 0.16
J04449-1|AAA35747.1| 502|Homo sapiens cytochrome P450 nifedipin... 29 8.0
>X79238-1|CAA55820.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 135 bits (326), Expect = 6e-32
Identities = 64/79 (81%), Positives = 70/79 (88%)
Frame = +3
Query: 27 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 206
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 207 EYYALLAKTGVHHYSGTTL 263
EYYA+LAKTGVHHYSG +
Sbjct: 61 EYYAMLAKTGVHHYSGNNI 79
Score = 68.5 bits (160), Expect = 8e-12
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +2
Query: 254 DNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 355
+NIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 77 NNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 110
>L05095-1|AAC15858.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 135 bits (326), Expect = 6e-32
Identities = 64/79 (81%), Positives = 70/79 (88%)
Frame = +3
Query: 27 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 206
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 207 EYYALLAKTGVHHYSGTTL 263
EYYA+LAKTGVHHYSG +
Sbjct: 61 EYYAMLAKTGVHHYSGNNI 79
Score = 68.5 bits (160), Expect = 8e-12
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +2
Query: 254 DNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 355
+NIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 77 NNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 110
>BC095426-1|AAH95426.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 135 bits (326), Expect = 6e-32
Identities = 64/79 (81%), Positives = 70/79 (88%)
Frame = +3
Query: 27 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 206
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 207 EYYALLAKTGVHHYSGTTL 263
EYYA+LAKTGVHHYSG +
Sbjct: 61 EYYAMLAKTGVHHYSGNNI 79
Score = 68.5 bits (160), Expect = 8e-12
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +2
Query: 254 DNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 355
+NIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 77 NNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 110
>BC032700-1|AAH32700.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 135 bits (326), Expect = 6e-32
Identities = 64/79 (81%), Positives = 70/79 (88%)
Frame = +3
Query: 27 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 206
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 207 EYYALLAKTGVHHYSGTTL 263
EYYA+LAKTGVHHYSG +
Sbjct: 61 EYYAMLAKTGVHHYSGNNI 79
Score = 68.5 bits (160), Expect = 8e-12
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +2
Query: 254 DNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 355
+NIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 77 NNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 110
>AB070559-1|BAB79491.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 135 bits (326), Expect = 6e-32
Identities = 64/79 (81%), Positives = 70/79 (88%)
Frame = +3
Query: 27 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 206
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 207 EYYALLAKTGVHHYSGTTL 263
EYYA+LAKTGVHHYSG +
Sbjct: 61 EYYAMLAKTGVHHYSGNNI 79
Score = 68.5 bits (160), Expect = 8e-12
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +2
Query: 254 DNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 355
+NIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 77 NNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 110
>X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein.
Length = 437
Score = 34.3 bits (75), Expect = 0.16
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 96 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 194
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor 1
protein.
Length = 437
Score = 34.3 bits (75), Expect = 0.16
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 96 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 194
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 404
Score = 34.3 bits (75), Expect = 0.16
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 96 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 194
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 265 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 297
>BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 437
Score = 34.3 bits (75), Expect = 0.16
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 96 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 194
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein.
Length = 404
Score = 34.3 bits (75), Expect = 0.16
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 96 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 194
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 265 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 297
>AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein.
Length = 437
Score = 34.3 bits (75), Expect = 0.16
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 96 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 194
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>J04449-1|AAA35747.1| 502|Homo sapiens cytochrome P450 nifedipine
oxidase protein.
Length = 502
Score = 28.7 bits (61), Expect = 8.0
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = -3
Query: 199 DFLSGGAFLAMITSFALPCRRVFKVCLYPKQYFPDFITKARRELIDS 59
DFL FL++I F +P V +C++P++ +F+ K+ + + +S
Sbjct: 214 DFLDP-FFLSIIFPFLIPILEVLNICVFPRE-VTNFLRKSVKRMKES 258
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,710,918
Number of Sequences: 237096
Number of extensions: 942523
Number of successful extensions: 2133
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2133
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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