Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30610
         (682 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014913-1|AAT47764.1|  256|Drosophila melanogaster RH21963p pro...   165   4e-41
AY071342-1|AAL48964.1|  256|Drosophila melanogaster RE37829p pro...   165   4e-41
AF098520-1|AAF06828.1|  256|Drosophila melanogaster ribosomal pr...   165   4e-41
AE014296-477|AAF47660.1|  256|Drosophila melanogaster CG1263-PB,...   165   4e-41
AE014296-476|AAF47659.1|  256|Drosophila melanogaster CG1263-PA,...   165   4e-41
BT022891-1|AAY55307.1|  579|Drosophila melanogaster IP12501p pro...   157   1e-38
AY113486-1|AAM29491.1|  294|Drosophila melanogaster RE45450p pro...    31   1.9  
AE014296-1910|AAF50091.1|  294|Drosophila melanogaster CG7636-PA...    31   1.9  

>BT014913-1|AAT47764.1|  256|Drosophila melanogaster RH21963p
           protein.
          Length = 256

 Score =  165 bits (402), Expect = 4e-41
 Identities = 71/85 (83%), Positives = 80/85 (94%)
 Frame = +3

Query: 255 IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGFYTGQFVYCGKKATLEVGN 434
           I+GVVKDIIHDPGRGAPLAVVHFRDPY++K RKELFIAPEG +TGQFVYCG+KATL++GN
Sbjct: 41  IRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGN 100

Query: 435 VMPVGAMPEGTIVCNLEEKMGDRGR 509
           VMP+  MPEGTI+CNLEEK GDRGR
Sbjct: 101 VMPLSQMPEGTIICNLEEKTGDRGR 125



 Score = 87.8 bits (208), Expect = 1e-17
 Identities = 41/52 (78%), Positives = 45/52 (86%)
 Frame = +2

Query: 509 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVXIVAXGGRIDK 664
           LAR SGN+ATVI HN D K+TRVKLPSGAKKV+PS+NR MV IVA GGRIDK
Sbjct: 126 LARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDK 177



 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 34/46 (73%), Positives = 39/46 (84%)
 Frame = +1

Query: 136 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHG*SRELLR 273
           MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER G  R +++
Sbjct: 1   MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVK 46


>AY071342-1|AAL48964.1|  256|Drosophila melanogaster RE37829p
           protein.
          Length = 256

 Score =  165 bits (402), Expect = 4e-41
 Identities = 71/85 (83%), Positives = 80/85 (94%)
 Frame = +3

Query: 255 IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGFYTGQFVYCGKKATLEVGN 434
           I+GVVKDIIHDPGRGAPLAVVHFRDPY++K RKELFIAPEG +TGQFVYCG+KATL++GN
Sbjct: 41  IRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGN 100

Query: 435 VMPVGAMPEGTIVCNLEEKMGDRGR 509
           VMP+  MPEGTI+CNLEEK GDRGR
Sbjct: 101 VMPLSQMPEGTIICNLEEKTGDRGR 125



 Score = 87.8 bits (208), Expect = 1e-17
 Identities = 41/52 (78%), Positives = 45/52 (86%)
 Frame = +2

Query: 509 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVXIVAXGGRIDK 664
           LAR SGN+ATVI HN D K+TRVKLPSGAKKV+PS+NR MV IVA GGRIDK
Sbjct: 126 LARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDK 177



 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 34/46 (73%), Positives = 39/46 (84%)
 Frame = +1

Query: 136 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHG*SRELLR 273
           MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER G  R +++
Sbjct: 1   MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVK 46


>AF098520-1|AAF06828.1|  256|Drosophila melanogaster ribosomal
           protein L8 protein.
          Length = 256

 Score =  165 bits (402), Expect = 4e-41
 Identities = 71/85 (83%), Positives = 80/85 (94%)
 Frame = +3

Query: 255 IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGFYTGQFVYCGKKATLEVGN 434
           I+GVVKDIIHDPGRGAPLAVVHFRDPY++K RKELFIAPEG +TGQFVYCG+KATL++GN
Sbjct: 41  IRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGN 100

Query: 435 VMPVGAMPEGTIVCNLEEKMGDRGR 509
           VMP+  MPEGTI+CNLEEK GDRGR
Sbjct: 101 VMPLSQMPEGTIICNLEEKTGDRGR 125



 Score = 87.8 bits (208), Expect = 1e-17
 Identities = 41/52 (78%), Positives = 45/52 (86%)
 Frame = +2

Query: 509 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVXIVAXGGRIDK 664
           LAR SGN+ATVI HN D K+TRVKLPSGAKKV+PS+NR MV IVA GGRIDK
Sbjct: 126 LARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDK 177



 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 34/46 (73%), Positives = 39/46 (84%)
 Frame = +1

Query: 136 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHG*SRELLR 273
           MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER G  R +++
Sbjct: 1   MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVK 46


>AE014296-477|AAF47660.1|  256|Drosophila melanogaster CG1263-PB,
           isoform B protein.
          Length = 256

 Score =  165 bits (402), Expect = 4e-41
 Identities = 71/85 (83%), Positives = 80/85 (94%)
 Frame = +3

Query: 255 IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGFYTGQFVYCGKKATLEVGN 434
           I+GVVKDIIHDPGRGAPLAVVHFRDPY++K RKELFIAPEG +TGQFVYCG+KATL++GN
Sbjct: 41  IRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGN 100

Query: 435 VMPVGAMPEGTIVCNLEEKMGDRGR 509
           VMP+  MPEGTI+CNLEEK GDRGR
Sbjct: 101 VMPLSQMPEGTIICNLEEKTGDRGR 125



 Score = 87.8 bits (208), Expect = 1e-17
 Identities = 41/52 (78%), Positives = 45/52 (86%)
 Frame = +2

Query: 509 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVXIVAXGGRIDK 664
           LAR SGN+ATVI HN D K+TRVKLPSGAKKV+PS+NR MV IVA GGRIDK
Sbjct: 126 LARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDK 177



 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 34/46 (73%), Positives = 39/46 (84%)
 Frame = +1

Query: 136 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHG*SRELLR 273
           MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER G  R +++
Sbjct: 1   MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVK 46


>AE014296-476|AAF47659.1|  256|Drosophila melanogaster CG1263-PA,
           isoform A protein.
          Length = 256

 Score =  165 bits (402), Expect = 4e-41
 Identities = 71/85 (83%), Positives = 80/85 (94%)
 Frame = +3

Query: 255 IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGFYTGQFVYCGKKATLEVGN 434
           I+GVVKDIIHDPGRGAPLAVVHFRDPY++K RKELFIAPEG +TGQFVYCG+KATL++GN
Sbjct: 41  IRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGN 100

Query: 435 VMPVGAMPEGTIVCNLEEKMGDRGR 509
           VMP+  MPEGTI+CNLEEK GDRGR
Sbjct: 101 VMPLSQMPEGTIICNLEEKTGDRGR 125



 Score = 87.8 bits (208), Expect = 1e-17
 Identities = 41/52 (78%), Positives = 45/52 (86%)
 Frame = +2

Query: 509 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVXIVAXGGRIDK 664
           LAR SGN+ATVI HN D K+TRVKLPSGAKKV+PS+NR MV IVA GGRIDK
Sbjct: 126 LARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDK 177



 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 34/46 (73%), Positives = 39/46 (84%)
 Frame = +1

Query: 136 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHG*SRELLR 273
           MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER G  R +++
Sbjct: 1   MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVK 46


>BT022891-1|AAY55307.1|  579|Drosophila melanogaster IP12501p
           protein.
          Length = 579

 Score =  157 bits (382), Expect = 1e-38
 Identities = 67/80 (83%), Positives = 75/80 (93%)
 Frame = +3

Query: 270 KDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGFYTGQFVYCGKKATLEVGNVMPVG 449
           KDIIHDPGRGAPLAVVHFRDPY++K RKELFIAPEG +TGQFVYCG+KATL++GNVMP+ 
Sbjct: 1   KDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLS 60

Query: 450 AMPEGTIVCNLEEKMGDRGR 509
            MPEGTI+CNLEEK GDRGR
Sbjct: 61  QMPEGTIICNLEEKTGDRGR 80



 Score = 87.8 bits (208), Expect = 1e-17
 Identities = 41/52 (78%), Positives = 45/52 (86%)
 Frame = +2

Query: 509 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVXIVAXGGRIDK 664
           LAR SGN+ATVI HN D K+TRVKLPSGAKKV+PS+NR MV IVA GGRIDK
Sbjct: 81  LARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDK 132


>AY113486-1|AAM29491.1|  294|Drosophila melanogaster RE45450p
           protein.
          Length = 294

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 23/78 (29%), Positives = 38/78 (48%)
 Frame = +3

Query: 264 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGFYTGQFVYCGKKATLEVGNVMP 443
           +V +++ D  R A +A+V   D  K+    E   A +   T +F+        E G+  P
Sbjct: 107 LVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRFIPRIPVRPNE-GDAYP 165

Query: 444 VGAMPEGTIVCNLEEKMG 497
           +GA+P GT +  LE+  G
Sbjct: 166 LGALPVGTRIHCLEKNPG 183


>AE014296-1910|AAF50091.1|  294|Drosophila melanogaster CG7636-PA
           protein.
          Length = 294

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 23/78 (29%), Positives = 38/78 (48%)
 Frame = +3

Query: 264 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGFYTGQFVYCGKKATLEVGNVMP 443
           +V +++ D  R A +A+V   D  K+    E   A +   T +F+        E G+  P
Sbjct: 107 LVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRFIPRIPVRPNE-GDAYP 165

Query: 444 VGAMPEGTIVCNLEEKMG 497
           +GA+P GT +  LE+  G
Sbjct: 166 LGALPVGTRIHCLEKNPG 183


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,746,221
Number of Sequences: 53049
Number of extensions: 622771
Number of successful extensions: 1568
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1568
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)