Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30609
(651 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089228-1|AAL89966.1| 440|Drosophila melanogaster AT02348p pro... 64 1e-10
AE014296-2761|AAF49444.1| 440|Drosophila melanogaster CG4169-PA... 64 1e-10
AY058243-1|AAL13472.1| 470|Drosophila melanogaster GH01077p pro... 30 2.4
AE014297-1916|AAN13622.1| 470|Drosophila melanogaster CG3731-PB... 30 2.4
AE014297-1915|AAF55110.2| 470|Drosophila melanogaster CG3731-PA... 30 2.4
AY928610-3|AAX28845.1| 487|Drosophila melanogaster envelope pro... 29 4.1
AY061584-1|AAL29132.1| 487|Drosophila melanogaster SD03311p pro... 29 4.1
AJ001516-1|CAC79666.1| 550|Drosophila melanogaster env protein ... 29 4.1
>AY089228-1|AAL89966.1| 440|Drosophila melanogaster AT02348p
protein.
Length = 440
Score = 64.5 bits (150), Expect = 1e-10
Identities = 31/73 (42%), Positives = 44/73 (60%)
Frame = +3
Query: 255 LRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLVS 434
LR A GL+T+N ++F I R + Q+G ++ GDRE + YT+ T D L L +L+
Sbjct: 77 LRLAGGLSTQNSTAFAIARNIQQVGGTLTTWGDRELVGYTVTTTADNAETGLRYLQDLL- 135
Query: 435 NQEFRPWELNDNA 473
F+PWEL DNA
Sbjct: 136 QPAFKPWELVDNA 148
Score = 46.8 bits (106), Expect = 3e-05
Identities = 20/44 (45%), Positives = 33/44 (75%)
Frame = +2
Query: 503 TTQIRAVDLLHKAAYRRGLGNSLFISXKRINDISSESLQLFASQ 634
+T+ RA++L+HKAA+R GLGNS++ ++ +SSESL + +Q
Sbjct: 159 STEERAIELVHKAAFRNGLGNSIYSPRFQLGKLSSESLLHYVAQ 202
Score = 42.7 bits (96), Expect = 4e-04
Identities = 27/76 (35%), Positives = 34/76 (44%)
Frame = +1
Query: 28 MASKTLVAPFIRHVTIRGYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFK 207
MA +R + RGYA V + VL NK VA D PV+RV++
Sbjct: 1 MACNASKTSLLRAIAKRGYATCPRPVGDLSAVNVKVLENKLVVATADATLPVSRVSLVLG 60
Query: 208 AGSRYEPQAELGLSHV 255
AGSR E G SH+
Sbjct: 61 AGSRNESYDIQGASHL 76
>AE014296-2761|AAF49444.1| 440|Drosophila melanogaster CG4169-PA
protein.
Length = 440
Score = 64.5 bits (150), Expect = 1e-10
Identities = 31/73 (42%), Positives = 44/73 (60%)
Frame = +3
Query: 255 LRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLVS 434
LR A GL+T+N ++F I R + Q+G ++ GDRE + YT+ T D L L +L+
Sbjct: 77 LRLAGGLSTQNSTAFAIARNIQQVGGTLTTWGDRELVGYTVTTTADNAETGLRYLQDLL- 135
Query: 435 NQEFRPWELNDNA 473
F+PWEL DNA
Sbjct: 136 QPAFKPWELVDNA 148
Score = 46.8 bits (106), Expect = 3e-05
Identities = 20/44 (45%), Positives = 33/44 (75%)
Frame = +2
Query: 503 TTQIRAVDLLHKAAYRRGLGNSLFISXKRINDISSESLQLFASQ 634
+T+ RA++L+HKAA+R GLGNS++ ++ +SSESL + +Q
Sbjct: 159 STEERAIELVHKAAFRNGLGNSIYSPRFQLGKLSSESLLHYVAQ 202
Score = 42.7 bits (96), Expect = 4e-04
Identities = 27/76 (35%), Positives = 34/76 (44%)
Frame = +1
Query: 28 MASKTLVAPFIRHVTIRGYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFK 207
MA +R + RGYA V + VL NK VA D PV+RV++
Sbjct: 1 MACNASKTSLLRAIAKRGYATCPRPVGDLSAVNVKVLENKLVVATADATLPVSRVSLVLG 60
Query: 208 AGSRYEPQAELGLSHV 255
AGSR E G SH+
Sbjct: 61 AGSRNESYDIQGASHL 76
>AY058243-1|AAL13472.1| 470|Drosophila melanogaster GH01077p
protein.
Length = 470
Score = 30.3 bits (65), Expect = 2.4
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +1
Query: 55 FIRHVT-IRGYAQAAPAVKKDVRI---QSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRY 222
F+R V I+ Y AA K + I Q + L N VA+ D+G+ V + AGSR
Sbjct: 15 FMRGVDMIKRYKSAATLQKTLLNIPATQVTKLDNGLRVASEDSGASTATVGLWIDAGSRS 74
Query: 223 EPQAELGLSHVYDQL 267
E + G++H + +
Sbjct: 75 ENEKNNGVAHFLEHM 89
>AE014297-1916|AAN13622.1| 470|Drosophila melanogaster CG3731-PB,
isoform B protein.
Length = 470
Score = 30.3 bits (65), Expect = 2.4
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +1
Query: 55 FIRHVT-IRGYAQAAPAVKKDVRI---QSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRY 222
F+R V I+ Y AA K + I Q + L N VA+ D+G+ V + AGSR
Sbjct: 15 FMRGVDMIKRYKSAATLQKTLLNIPATQVTKLDNGLRVASEDSGASTATVGLWIDAGSRS 74
Query: 223 EPQAELGLSHVYDQL 267
E + G++H + +
Sbjct: 75 ENEKNNGVAHFLEHM 89
>AE014297-1915|AAF55110.2| 470|Drosophila melanogaster CG3731-PA,
isoform A protein.
Length = 470
Score = 30.3 bits (65), Expect = 2.4
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +1
Query: 55 FIRHVT-IRGYAQAAPAVKKDVRI---QSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRY 222
F+R V I+ Y AA K + I Q + L N VA+ D+G+ V + AGSR
Sbjct: 15 FMRGVDMIKRYKSAATLQKTLLNIPATQVTKLDNGLRVASEDSGASTATVGLWIDAGSRS 74
Query: 223 EPQAELGLSHVYDQL 267
E + G++H + +
Sbjct: 75 ENEKNNGVAHFLEHM 89
>AY928610-3|AAX28845.1| 487|Drosophila melanogaster envelope
protein protein.
Length = 487
Score = 29.5 bits (63), Expect = 4.1
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +3
Query: 387 QDKLNDALEILNNLVSNQEFRPWELNDNAPRLKYDIISLPPKFVL*ICSIRQPIVVDWVT 566
QD L + ++ LN + N E LND + I++ PKF+L +D +
Sbjct: 135 QDTLLEEIQYLNRINYNIELFINHLNDITESMLLAKINIIPKFIL------NEQEMDKIK 188
Query: 567 RSSSRQRGLMIFHQSLFSFLQAKTL 641
+Q + QS+++FLQ TL
Sbjct: 189 TILEKQNITVKNEQSIYNFLQMNTL 213
>AY061584-1|AAL29132.1| 487|Drosophila melanogaster SD03311p
protein.
Length = 487
Score = 29.5 bits (63), Expect = 4.1
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +3
Query: 387 QDKLNDALEILNNLVSNQEFRPWELNDNAPRLKYDIISLPPKFVL*ICSIRQPIVVDWVT 566
QD L + ++ LN + N E LND + I++ PKF+L +D +
Sbjct: 135 QDTLLEEIQYLNRINYNIELFINHLNDITESMLLAKINIIPKFIL------NEQEMDKIK 188
Query: 567 RSSSRQRGLMIFHQSLFSFLQAKTL 641
+Q + QS+++FLQ TL
Sbjct: 189 TILEKQNITVKNEQSIYNFLQMNTL 213
>AJ001516-1|CAC79666.1| 550|Drosophila melanogaster env protein
protein.
Length = 550
Score = 29.5 bits (63), Expect = 4.1
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +3
Query: 387 QDKLNDALEILNNLVSNQEFRPWELNDNAPRLKYDIISLPPKFVL*ICSIRQPIVVDWVT 566
QD L + ++ LN + N E LND + I++ PKF+L +D +
Sbjct: 198 QDTLLEEIQYLNRINYNIELFINHLNDITESMLLAKINIIPKFIL------NEQEMDKIK 251
Query: 567 RSSSRQRGLMIFHQSLFSFLQAKTL 641
+Q + QS+++FLQ TL
Sbjct: 252 TILEKQNITVKNEQSIYNFLQMNTL 276
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,431,582
Number of Sequences: 53049
Number of extensions: 584519
Number of successful extensions: 1224
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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