Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30609
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72514-2|CAA96675.2| 422|Caenorhabditis elegans Hypothetical pr... 41 9e-04
Z67734-5|CAD56227.1| 424|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z67734-4|CAB54182.1| 410|Caenorhabditis elegans Hypothetical pr... 40 0.002
AL032678-2|CAC35829.2| 424|Caenorhabditis elegans Hypothetical ... 40 0.002
AL032678-1|CAB54320.1| 410|Caenorhabditis elegans Hypothetical ... 40 0.002
AF100306-6|AAC68920.1| 427|Caenorhabditis elegans Hypothetical ... 40 0.002
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 33 0.13
U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z68270-1|CAA92566.2| 458|Caenorhabditis elegans Hypothetical pr... 30 1.2
AC025726-19|AAK73925.1| 477|Caenorhabditis elegans Mitochondria... 28 6.6
U56961-3|AAK39294.1| 634|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z72514-2|CAA96675.2| 422|Caenorhabditis elegans Hypothetical
protein T10B10.2 protein.
Length = 422
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/84 (23%), Positives = 38/84 (45%)
Frame = +3
Query: 240 GIVACLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEIL 419
G+ +R+ G T+ + LSQ G + + R+ +L ++ + L +L
Sbjct: 62 GLSHTIRNFVGRDTQEYFGNTVVWTLSQTGGVLKSFTSRDLFGVSLTIPRESTSVGLSVL 121
Query: 420 NNLVSNQEFRPWELNDNAPRLKYD 491
+ N F+PWE+ D P ++ D
Sbjct: 122 GQVAGNPGFKPWEVEDVLPTMRAD 145
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 497 FSTTQIRAVDLLHKAAYRRG-LGNSLFISXKRINDISSESLQLFASQN 637
+ T VD +HKAAYR G LGNS++ +I I + +L FA Q+
Sbjct: 148 YRTAYDLVVDQIHKAAYRNGGLGNSIYAPCSKIGSICTSTLSSFAEQH 195
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 136 LPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSH 252
L N V +D+ P+ + +AF+AGSRYE + GLSH
Sbjct: 27 LGNGLTVGTIDSHKPIAHLVLAFRAGSRYEKANQAGLSH 65
>Z67734-5|CAD56227.1| 424|Caenorhabditis elegans Hypothetical
protein VW06B3R.1b protein.
Length = 424
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/55 (32%), Positives = 35/55 (63%)
Frame = +1
Query: 91 AAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHV 255
+A A V+ +++VL N V++++ + + +AF+AGSRY+P + GL+H+
Sbjct: 29 SAAAKSAGVQEKTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHL 83
Score = 35.1 bits (77), Expect = 0.044
Identities = 17/76 (22%), Positives = 35/76 (46%)
Frame = +3
Query: 240 GIVACLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEIL 419
G+ +R++ G N + +Q G ++A +R+ + + +D+ L +L
Sbjct: 79 GLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLAIEVNVVRDQSAVVLSLL 138
Query: 420 NNLVSNQEFRPWELND 467
L N F+PW++ D
Sbjct: 139 GQL-GNNAFKPWDVED 153
>Z67734-4|CAB54182.1| 410|Caenorhabditis elegans Hypothetical
protein VW06B3R.1a protein.
Length = 410
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/55 (32%), Positives = 35/55 (63%)
Frame = +1
Query: 91 AAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHV 255
+A A V+ +++VL N V++++ + + +AF+AGSRY+P + GL+H+
Sbjct: 15 SAAAKSAGVQEKTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHL 69
Score = 35.1 bits (77), Expect = 0.044
Identities = 17/76 (22%), Positives = 35/76 (46%)
Frame = +3
Query: 240 GIVACLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEIL 419
G+ +R++ G N + +Q G ++A +R+ + + +D+ L +L
Sbjct: 65 GLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLAIEVNVVRDQSAVVLSLL 124
Query: 420 NNLVSNQEFRPWELND 467
L N F+PW++ D
Sbjct: 125 GQL-GNNAFKPWDVED 139
>AL032678-2|CAC35829.2| 424|Caenorhabditis elegans Hypothetical
protein VW06B3R.1b protein.
Length = 424
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/55 (32%), Positives = 35/55 (63%)
Frame = +1
Query: 91 AAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHV 255
+A A V+ +++VL N V++++ + + +AF+AGSRY+P + GL+H+
Sbjct: 29 SAAAKSAGVQEKTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHL 83
Score = 35.1 bits (77), Expect = 0.044
Identities = 17/76 (22%), Positives = 35/76 (46%)
Frame = +3
Query: 240 GIVACLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEIL 419
G+ +R++ G N + +Q G ++A +R+ + + +D+ L +L
Sbjct: 79 GLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLAIEVNVVRDQSAVVLSLL 138
Query: 420 NNLVSNQEFRPWELND 467
L N F+PW++ D
Sbjct: 139 GQL-GNNAFKPWDVED 153
>AL032678-1|CAB54320.1| 410|Caenorhabditis elegans Hypothetical
protein VW06B3R.1a protein.
Length = 410
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/55 (32%), Positives = 35/55 (63%)
Frame = +1
Query: 91 AAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHV 255
+A A V+ +++VL N V++++ + + +AF+AGSRY+P + GL+H+
Sbjct: 15 SAAAKSAGVQEKTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHL 69
Score = 35.1 bits (77), Expect = 0.044
Identities = 17/76 (22%), Positives = 35/76 (46%)
Frame = +3
Query: 240 GIVACLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEIL 419
G+ +R++ G N + +Q G ++A +R+ + + +D+ L +L
Sbjct: 65 GLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLAIEVNVVRDQSAVVLSLL 124
Query: 420 NNLVSNQEFRPWELND 467
L N F+PW++ D
Sbjct: 125 GQL-GNNAFKPWDVED 139
>AF100306-6|AAC68920.1| 427|Caenorhabditis elegans Hypothetical
protein T24C4.1 protein.
Length = 427
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/90 (23%), Positives = 41/90 (45%)
Frame = +3
Query: 240 GIVACLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEIL 419
G+V +R+ G ++ + + GA +++ R+ + +D+ AL IL
Sbjct: 61 GLVHHVRNFVGRDAQSYPGLQLVWSSAASGANLNSFATRDIFGVQISVARDQAAYALSIL 120
Query: 420 NNLVSNQEFRPWELNDNAPRLKYDIISLPP 509
++ + F+PWEL D P + D+ P
Sbjct: 121 GHVAAKPAFKPWELEDVTPTILADLSQKTP 150
Score = 34.7 bits (76), Expect = 0.058
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 91 AAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSH 252
AA +K + L N V + +N ++++ +AF+AGSRYE + GL H
Sbjct: 11 AAIKTQKPTGSLKTKLNNGLKVVSQENNGAISQLILAFRAGSRYEKVTQPGLVH 64
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +1
Query: 16 KLTKMASKTLVAPFIRHVTIRGYAQAAP-AVKKDVRIQ---SSVLPNKTFVAALDNGSPV 183
KLT + SK L+ P H T + P VK +Q ++ LP + +V++ N P+
Sbjct: 1030 KLTVLESKKLIKPIKAHTTPTAASNTTPIPVKTTTTLQTTTATTLP-ENYVSSSTN-RPL 1087
Query: 184 TRVTIAFKAGSRYEPQAEL 240
T + I+ K GS P ++
Sbjct: 1088 TPIIISMKLGSTSSPSPQI 1106
>U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical
protein F56D2.1 protein.
Length = 471
Score = 32.7 bits (71), Expect = 0.23
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Frame = +1
Query: 28 MASKTLVAPFIRHVTIRGYAQAAPAVK-KDV-----RIQSSVLPNKTFVAALDNGSPVTR 189
MA + V+ +R A+ AV KDV + + + L N V DNGS
Sbjct: 1 MALRLAVSSALRPALNSQVRNASSAVSVKDVLASAPQAEVTTLKNGFRVVTEDNGSATAT 60
Query: 190 VTIAFKAGSRYEPQAELGLSHVYDQLL 270
V + + GSR+E + G++H ++L+
Sbjct: 61 VGVWIETGSRFENEKNNGVAHFLERLI 87
>Z68270-1|CAA92566.2| 458|Caenorhabditis elegans Hypothetical
protein ZC410.2 protein.
Length = 458
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 130 SVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVYDQL 267
+ LPN VA + G + + AGSRYE + G +H + +
Sbjct: 33 TTLPNGFRVATENTGGSTATIGVFIDAGSRYENEKNNGTAHFLEHM 78
>AC025726-19|AAK73925.1| 477|Caenorhabditis elegans Mitochondrial
processing peptidasealpha protein 1 protein.
Length = 477
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 136 LPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSHVYDQL 267
LPN V D V +A ++G RYE G+S + ++L
Sbjct: 24 LPNGLKVCTEDTYGDFVTVGVAIESGCRYENGFPFGISRIVEKL 67
>U56961-3|AAK39294.1| 634|Caenorhabditis elegans Hypothetical
protein T19D7.4 protein.
Length = 634
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +3
Query: 375 LEATQDKLNDALEILNNLVSNQEFRPWELNDNAPRLKYDIISLPPKFVL*ICS 533
LE Q++LN++L L++ + +FR ++N+ P + ++S KF C+
Sbjct: 69 LEEEQERLNNSLFSLSSHFAQVQFRIKQMNEADPSDRLKLLSDLQKFAFKGCT 121
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,606,235
Number of Sequences: 27780
Number of extensions: 295877
Number of successful extensions: 673
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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