Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30602
         (316 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001650-1|AAN71405.1|  219|Drosophila melanogaster RE43931p pro...    39   0.001
AE014134-1288|AAF52521.1|  219|Drosophila melanogaster CG6055-PA...    39   0.001
BT014659-1|AAT27283.1|  231|Drosophila melanogaster HL04814p pro...    29   0.95 
AY070683-1|AAL48154.1|  231|Drosophila melanogaster RH18728p pro...    29   0.95 
AE014134-773|AAF50981.4|  231|Drosophila melanogaster CG3244-PA ...    29   0.95 

>BT001650-1|AAN71405.1|  219|Drosophila melanogaster RE43931p
           protein.
          Length = 219

 Score = 39.1 bits (87), Expect = 0.001
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +3

Query: 3   EDSDELLNFVRSRNPGLRL 59
           EDSDELLNFVRSRNP +RL
Sbjct: 201 EDSDELLNFVRSRNPNVRL 219


>AE014134-1288|AAF52521.1|  219|Drosophila melanogaster CG6055-PA
           protein.
          Length = 219

 Score = 39.1 bits (87), Expect = 0.001
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +3

Query: 3   EDSDELLNFVRSRNPGLRL 59
           EDSDELLNFVRSRNP +RL
Sbjct: 201 EDSDELLNFVRSRNPNVRL 219


>BT014659-1|AAT27283.1|  231|Drosophila melanogaster HL04814p
           protein.
          Length = 231

 Score = 29.5 bits (63), Expect = 0.95
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +3

Query: 3   EDSDELLNFVRSRNPGLRL 59
           ED++ELL +V + NPG+RL
Sbjct: 213 EDNEELLRYVAATNPGIRL 231


>AY070683-1|AAL48154.1|  231|Drosophila melanogaster RH18728p
           protein.
          Length = 231

 Score = 29.5 bits (63), Expect = 0.95
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +3

Query: 3   EDSDELLNFVRSRNPGLRL 59
           ED++ELL +V + NPG+RL
Sbjct: 213 EDNEELLRYVAATNPGIRL 231


>AE014134-773|AAF50981.4|  231|Drosophila melanogaster CG3244-PA
           protein.
          Length = 231

 Score = 29.5 bits (63), Expect = 0.95
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +3

Query: 3   EDSDELLNFVRSRNPGLRL 59
           ED++ELL +V + NPG+RL
Sbjct: 213 EDNEELLRYVAATNPGIRL 231


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,331,134
Number of Sequences: 53049
Number of extensions: 135417
Number of successful extensions: 254
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 631882260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)