Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30600
(419 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0867 - 32586254-32586574,32586756-32587172 32 0.16
07_01_0466 - 3518315-3521428 29 1.5
08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817 29 2.0
04_04_0733 + 27639581-27641257 29 2.0
11_06_0289 - 21969248-21973516 28 2.7
11_01_0724 + 5981680-5981748,5982301-5982397,5982496-5982593,598... 28 3.5
04_04_1559 - 34428286-34429062 28 3.5
04_03_0768 - 19396146-19396607,19397855-19398175,19398424-193995... 28 3.5
10_01_0086 - 1064650-1065379,1065796-1065950,1066029-1066141,106... 27 4.6
02_05_1297 - 35536193-35536312,35536405-35536467,35536610-355369... 27 4.6
01_06_0210 - 27559090-27559239,27560445-27560567,27561069-275611... 27 4.6
01_02_0091 - 11023912-11024017,11024112-11024185,11024478-110248... 27 4.6
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 27 6.1
11_04_0043 + 12703579-12703648,12704412-12704484,12705604-127058... 27 6.1
10_08_0678 + 19835903-19836484 27 6.1
08_01_0030 + 222748-222829,223224-223448,223800-224204,224773-22... 27 6.1
06_03_0908 - 25858909-25859185,25859765-25859892,25860061-258607... 27 6.1
06_03_0726 + 23904350-23904964,23905986-23906021,23906158-239062... 27 6.1
04_04_0138 + 23067885-23068245,23068393-23068634 27 6.1
02_02_0258 - 8374442-8375083 27 6.1
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 27 6.1
11_06_0185 + 21018045-21022307 27 8.1
06_01_0075 + 615415-616061,616144-616295,616829-617865 27 8.1
03_02_0181 + 6214594-6214884 27 8.1
03_01_0471 + 3629158-3629185,3630027-3630058,3630272-3630344,363... 27 8.1
02_02_0159 + 7299685-7300572 27 8.1
02_02_0141 - 7131260-7131581,7132124-7132430,7134018-7134076,713... 27 8.1
>01_06_0867 - 32586254-32586574,32586756-32587172
Length = 245
Score = 32.3 bits (70), Expect = 0.16
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +3
Query: 21 HVPKEHSSLPATSNRVSALIHNYNLYGNVRDQHIYGNT-EVVPLHHSASVDDSRIDATST 197
+V K S +PA R +A Y + D +YG+ ++ L H S+ ++ +
Sbjct: 94 NVAKLLSRVPAALRREAARTVCYEAQARIADP-VYGSVGTILALQHQVSLLQGQLSVLES 152
Query: 198 ETVRSRVQAISGRLDTPP 251
+ RV S DTPP
Sbjct: 153 QLFNLRVALASAHPDTPP 170
>07_01_0466 - 3518315-3521428
Length = 1037
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +3
Query: 117 HIYGNTEVVPLHHSASVDDSRIDATSTETVRSRVQAISGRLDTPPLTPSAKRW 275
H+YG + P+HH + + DA +R+ A PPL A W
Sbjct: 765 HMYGRPALPPMHHLRPIPAASRDALRLSA--ARISAAHLARSEPPLRREAATW 815
>08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817
Length = 958
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 152 PLRVGRRFQDRRDVHGDGEESSPGDKRQTRYA 247
PLR+G ++ D H G E + G++ +RYA
Sbjct: 107 PLRMGDEDHNKNDWHNRGFEKAAGNQGMSRYA 138
>04_04_0733 + 27639581-27641257
Length = 558
Score = 28.7 bits (61), Expect = 2.0
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +3
Query: 192 STETVRSRVQAISGRLDTPP--LTPSAKRWPSIRTSGTAIRG 311
S TVR +V S LD PP PS+ PS R TA G
Sbjct: 454 SAATVRPKVGGSSFHLDAPPPVYIPSSPAIPSQRNKATATTG 495
>11_06_0289 - 21969248-21973516
Length = 1422
Score = 28.3 bits (60), Expect = 2.7
Identities = 11/48 (22%), Positives = 21/48 (43%)
Frame = +2
Query: 164 GRRFQDRRDVHGDGEESSPGDKRQTRYAAPDSVSKKMAVDQNVGHSDQ 307
G R +D +D GDGEE ++R + ++ + G ++
Sbjct: 442 GEREEDEKDERGDGEEEGKEERRDMEKGGEERKEQQQEEQEKEGRKEE 489
>11_01_0724 +
5981680-5981748,5982301-5982397,5982496-5982593,
5983535-5983690,5983986-5984063,5984135-5984266,
5984856-5984936,5985442-5985510,5985597-5985686,
5986001-5986145,5986218-5986276,5986384-5986479,
5986561-5986628,5986704-5986803,5986910-5986966,
5987179-5987337
Length = 517
Score = 27.9 bits (59), Expect = 3.5
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 15 TEHVPKEHSSLPATSNRVSALIHNYNLYGNVRDQHIYGNTEVVPLHHSASVDDSR 179
T HV K H SLP S+ +I + L+ +V +++ L H+ S +D R
Sbjct: 191 TLHVSKAHVSLPTLSDYDKEVISTWGLHNSV---------DIISLSHTRSAEDVR 236
>04_04_1559 - 34428286-34429062
Length = 258
Score = 27.9 bits (59), Expect = 3.5
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Frame = -1
Query: 320 ATFTPDRCARRSDRRPSFC*RSQGRRIESAAYRLDSTPHRLR---GRRVDPGIVDRRGVV 150
++ D C R ++RR C R + RRI ++ + P R+R GRR D I RR
Sbjct: 102 SSLAADPCERGAERRRESCERGRDRRIRTSHHH----PRRIRATVGRR-DDRIQARRSEA 156
Query: 149 QRDDFSVAIYVLISDVPIQIVVMDEGGNSIGRGGET 42
+ V S P V D+GG++ G ET
Sbjct: 157 AHGIRAGGEGVAGSAPP----VADDGGSAREGGRET 188
>04_03_0768 -
19396146-19396607,19397855-19398175,19398424-19399569,
19400073-19400855,19402114-19402149
Length = 915
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 39 SSLPATSNRVSALIHNYNLYGNVRDQHIYGNTE 137
+ +P SNR AL+ ++ +G V D +I N+E
Sbjct: 476 NGIPLESNRWEALLSHFQKFGQVIDIYIPSNSE 508
>10_01_0086 -
1064650-1065379,1065796-1065950,1066029-1066141,
1066238-1066345,1066773-1066890,1066996-1067069,
1067595-1067690,1068062-1068455
Length = 595
Score = 27.5 bits (58), Expect = 4.6
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 207 RSRVQAISGRLDTPPLTPSAKRWPS-IRTSGTAI 305
R VQ+ S L TPPLTP W + +R AI
Sbjct: 388 RKHVQSESSLLITPPLTPPPMPWAAPLRPGNIAI 421
>02_05_1297 -
35536193-35536312,35536405-35536467,35536610-35536942,
35537098-35537184,35538337-35538399,35538604-35538750,
35538900-35539001,35539069-35539197,35539506-35539664,
35539726-35539967,35540317-35540506,35540692-35540907,
35541536-35541760
Length = 691
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -2
Query: 298 VPDVLIDGHLFADGVRGGVSSLPLIAWTRLLTVSVDVASILESS 167
VP+ + HL + GV G ++ P+ + +V +DV SIL+++
Sbjct: 522 VPEQKLRAHLGSFGVTGNLALQPMYTLSGNESVLIDVLSILKAA 565
>01_06_0210 -
27559090-27559239,27560445-27560567,27561069-27561128,
27562045-27562068,27562313-27562653,27562684-27563731
Length = 581
Score = 27.5 bits (58), Expect = 4.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 246 PPLTPSAKRWPSIRTS 293
PP TPSA RWP T+
Sbjct: 2 PPATPSATRWPKTLTA 17
>01_02_0091 - 11023912-11024017,11024112-11024185,11024478-11024834,
11024938-11025166,11025468-11025559,11026099-11026326,
11027108-11027356,11027429-11027471,11027589-11027836,
11027922-11028035,11028122-11028322,11028417-11028593,
11028725-11028853,11029210-11029287,11029369-11029464,
11029563-11029634,11031549-11031677,11032105-11032220,
11033048-11033204,11033343-11033426,11033513-11033574,
11034901-11035067,11035162-11035226,11035315-11035371,
11035547-11035633,11036638-11036703,11036810-11036908
Length = 1193
Score = 27.5 bits (58), Expect = 4.6
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Frame = -1
Query: 245 RIESAAYRLDSTPH---RLRGRRVDPGIVDRRGVVQRDDFSVAIYVLISDVPIQIVVMDE 75
R ES Y ++T R R R + PG + VV +DD A S + I V +
Sbjct: 960 RSESRGYYEEATTDSFGRFRLRGLVPGSIYSVRVVAKDDHRFAAVERASPEYVSIDVGQD 1019
Query: 74 GGNSIG----RGGETAVLFGHVLGDD 9
+ I E+ +L GHV GDD
Sbjct: 1020 DISGIDFVVFERPESTILSGHVEGDD 1045
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 16 PSTCPKSTAVSPPRPIEFPPSSITTICMGTSEISTYMAT 132
PST P + ++PPR P S++T S S M+T
Sbjct: 190 PSTPPSAKTLTPPRRSPSPASTLTPPRRSPSPASRRMST 228
>11_04_0043 +
12703579-12703648,12704412-12704484,12705604-12705834,
12705874-12706540
Length = 346
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 212 TPHRLRGRRVDPGIVDRRGVVQRDDFSVAIYVLISDV 102
TPH GR+ ++D ++ DDF VA V I V
Sbjct: 9 TPHLAEGRQAAQTLLDWDSTLELDDFRVASTVSIDIV 45
>10_08_0678 + 19835903-19836484
Length = 193
Score = 27.1 bits (57), Expect = 6.1
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -1
Query: 176 GIVDRRGVVQ--RDDFSVAIYVLISDVPIQIVVMDEGGNSIGRGGETAVLFGH 24
G+VD V++ R S+A ++IS P+ + + +GG + GG L+ H
Sbjct: 140 GVVDEDDVLEMPRLMVSMAEGLMISPPPVMLGLQADGGGIMDEGGGVVRLWDH 192
>08_01_0030 +
222748-222829,223224-223448,223800-224204,224773-225389
Length = 442
Score = 27.1 bits (57), Expect = 6.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 19 STCPKSTAVSPPRPIEFPPSSITT 90
S+ + AVSPPRPI PSS +T
Sbjct: 292 SSFRSTVAVSPPRPIRRHPSSQST 315
>06_03_0908 -
25858909-25859185,25859765-25859892,25860061-25860765,
25860882-25860944,25861031-25861084,25861338-25861514,
25861644-25861813,25862011-25862065,25862220-25862918,
25863110-25863173,25863515-25863723,25866138-25866227,
25866390-25866617
Length = 972
Score = 27.1 bits (57), Expect = 6.1
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 18 EHVPKEHSSLPATSNRVSALIHNYNLYGNVRDQHIYGNTEVVPLHHSA 161
E + K H+ A V LI Y+LYG V + ++EV ++ A
Sbjct: 513 EAISKMHNMSAAVLTSVLTLIDEYDLYGQVAYPKRHKHSEVPDIYRLA 560
>06_03_0726 +
23904350-23904964,23905986-23906021,23906158-23906256,
23906445-23906627,23907016-23907105,23907187-23907285,
23907584-23907688,23907786-23907926,23908009-23908296,
23908536-23908826
Length = 648
Score = 27.1 bits (57), Expect = 6.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 281 RRPSFC*RSQGRRIESAAYRLDSTPHRLRGRRVDPGIVDRRG 156
R P+ + GRR +A Y ++ R RGR V +RRG
Sbjct: 128 RFPAPAEKGGGRRSSTARYARETESSRQRGRSVSRPPAERRG 169
>04_04_0138 + 23067885-23068245,23068393-23068634
Length = 200
Score = 27.1 bits (57), Expect = 6.1
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +1
Query: 10 SSPSTCPKSTAVSPPRPI---EFPPSSITTICMGTSEISTYMATLK 138
S P + P STA S P P+ PP +T +S+ Y + LK
Sbjct: 134 SVPRSTPNSTAPSTPTPVTVTRAPPQQMTPSPKTSSQTPEYSSGLK 179
>02_02_0258 - 8374442-8375083
Length = 213
Score = 27.1 bits (57), Expect = 6.1
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 308 PDRCARRSDRRPSFC*RSQGRRIESAAYRLDSTPHRLRGRRV 183
P RCARR RRP+ S + Y L+ P G RV
Sbjct: 90 PCRCARRRRRRPATSTSSSASALPPHMYVLEREPPVRWGARV 131
>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 27.1 bits (57), Expect = 6.1
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 10 SSPSTCPKST-AVSPPRPIEFPPSSITTI 93
+SP P S+ ++PP P+ F PSS+T +
Sbjct: 921 ASPRMMPGSSFRMNPPAPLPFIPSSVTPL 949
>11_06_0185 + 21018045-21022307
Length = 1420
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 164 GRRFQDRRDVHGDGEESSPGDKR 232
G R +D +D GDGEE ++R
Sbjct: 442 GERKEDEKDERGDGEEEGKEERR 464
>06_01_0075 + 615415-616061,616144-616295,616829-617865
Length = 611
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 263 SKKMAVDQNVGHSDQG*MLPALNEA 337
+KK A D + H D+G +PA+N+A
Sbjct: 15 AKKNACDLPIPHVDEGSSIPAVNDA 39
>03_02_0181 + 6214594-6214884
Length = 96
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 162 SVDDSRIDATSTETVRSRVQAISGRLDTP 248
S +D R A T TVRSR SG +TP
Sbjct: 52 SGEDGRRHAARTPTVRSRAPEASGSGETP 80
>03_01_0471 +
3629158-3629185,3630027-3630058,3630272-3630344,
3630745-3630969,3631319-3631789,3632286-3633118
Length = 553
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1
Query: 10 SSPSTCPKSTAVSPPRPIEFPPSS 81
S S+ S A SPPRPI PSS
Sbjct: 325 SQSSSFRSSVAASPPRPISRRPSS 348
>02_02_0159 + 7299685-7300572
Length = 295
Score = 26.6 bits (56), Expect = 8.1
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 95 VWERQRSAHIWQH*SRPAAPLRVGRRFQDRRDVHGDGEESSPGDKRQTRYAAPDSVSK 268
+W RS H H PAAP R R D +G+E+ G ++Q A + + +
Sbjct: 203 LWTPARSHH--SHSPAPAAPSRHRGRTTDSPFAASNGDEAGGGAQQQVDRKADEFIRR 258
>02_02_0141 -
7131260-7131581,7132124-7132430,7134018-7134076,
7134586-7134667,7135972-7136047,7136382-7136443,
7136946-7137006
Length = 322
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +2
Query: 188 DVHGDGEESSPGDKRQTRYAAPDSVSKKMAVDQNVGHSDQG 310
DV GD + +PG R+ P ++ ++Q+ S+ G
Sbjct: 111 DVRGDKQPFAPGRMREACAPVPPGAHEEACIEQSDDRSEDG 151
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,817,153
Number of Sequences: 37544
Number of extensions: 252531
Number of successful extensions: 1175
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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