Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30599
(717 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 127 3e-29
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 127 3e-29
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 127 3e-29
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 127 3e-29
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 127 3e-29
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 127 3e-29
BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein pr... 124 2e-28
AL357374-7|CAI13605.1| 336|Homo sapiens RNA binding motif prote... 120 5e-27
BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif prote... 96 1e-19
BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif prote... 95 2e-19
AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens ... 95 2e-19
AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein. 95 2e-19
CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein. 93 7e-19
AF087905-1|AAP97203.1| 425|Homo sapiens splicing factor SF2 pro... 75 3e-13
AL137533-1|CAB70796.1| 198|Homo sapiens hypothetical protein pr... 61 3e-09
AF263918-1|AAF73293.1| 910|Homo sapiens inner nuclear membrane ... 61 3e-09
AF112299-1|AAD31593.2| 911|Homo sapiens integral inner nuclear ... 61 3e-09
AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional coactiv... 41 0.004
BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein. 38 0.027
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 37 0.083
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 37 0.083
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 37 0.083
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 37 0.083
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 37 0.083
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 37 0.083
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 37 0.083
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 37 0.083
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 37 0.083
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 37 0.083
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 37 0.083
U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein. 36 0.14
BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha pro... 36 0.14
AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein. 36 0.14
AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activatin... 36 0.14
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 36 0.19
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 36 0.19
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 36 0.19
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 36 0.19
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 36 0.19
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 36 0.19
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 36 0.19
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 36 0.19
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 36 0.19
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 36 0.19
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 36 0.19
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 36 0.19
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 36 0.19
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 35 0.25
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 35 0.25
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 35 0.25
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 35 0.25
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 35 0.25
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 35 0.25
U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein. 34 0.58
U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein. 34 0.58
BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor, argini... 34 0.58
BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor, argini... 34 0.58
BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor, argini... 34 0.58
AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens ... 34 0.58
AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific heterog... 34 0.58
AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isof... 34 0.58
AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isof... 34 0.58
AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor, argini... 34 0.58
BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif prote... 33 1.0
AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open read... 33 1.0
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 33 1.0
AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open read... 33 1.0
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 33 1.0
AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens ... 33 1.0
AF069682-1|AAC24858.2| 392|Homo sapiens testes specific heterog... 33 1.0
AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein. 33 1.0
X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein. 32 1.8
U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein. 32 1.8
BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif prote... 32 1.8
BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1... 32 1.8
X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA ... 32 2.4
U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognit... 32 2.4
BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein. 32 2.4
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 31 3.1
X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein ... 31 3.1
U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein. 31 3.1
S62140-1|AAB27102.1| 526|Homo sapiens TLS protein. 31 3.1
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 31 3.1
CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein. 31 3.1
BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from t(... 31 3.1
BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in t(1... 31 3.1
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 31 3.1
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 31 3.1
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 31 3.1
BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in t(1... 31 3.1
BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in t(1... 31 3.1
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 31 3.1
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 31 3.1
AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif prote... 31 3.1
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 31 3.1
AJ549096-1|CAD79346.1| 157|Homo sapiens BBF2H7/FUS protein prot... 31 3.1
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 31 3.1
AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein. 31 3.1
AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein. 31 3.1
AB208902-1|BAD92139.1| 300|Homo sapiens fusion (involved in t(1... 31 3.1
BC112305-1|AAI12306.1| 300|Homo sapiens hydroxysteroid (17-beta... 31 4.1
BC112303-1|AAI12304.1| 300|Homo sapiens hydroxysteroid (17-beta... 31 4.1
BC034381-1|AAH34381.1| 266|Homo sapiens RNA binding motif prote... 31 4.1
AY358575-1|AAQ88938.1| 300|Homo sapiens NIIL497 protein. 31 4.1
AY268355-1|AAP42289.1| 300|Homo sapiens short-chain dehydrogena... 31 4.1
AY186249-1|AAO72313.1| 300|Homo sapiens 17-beta hydroxysteroid ... 31 4.1
AK002015-1|BAA92036.1| 267|Homo sapiens protein ( Homo sapiens ... 31 4.1
AF156098-1|AAD39257.1| 266|Homo sapiens RNA binding motif prote... 31 4.1
AB209753-1|BAD92990.1| 155|Homo sapiens Hypothetical protein FL... 31 4.1
AB073347-1|BAD38632.1| 300|Homo sapiens putative protein produc... 31 4.1
BC113716-1|AAI13717.1| 713|Homo sapiens low density lipoprotein... 31 5.4
BC113714-1|AAI13715.1| 713|Homo sapiens low density lipoprotein... 31 5.4
BC070262-1|AAH70262.1| 266|Homo sapiens RNA binding motif prote... 31 5.4
BC064901-1|AAH64901.1| 457|Homo sapiens LRP10 protein protein. 31 5.4
BC014917-1|AAH14917.1| 314|Homo sapiens UHMK1 protein protein. 31 5.4
AY358399-1|AAQ88765.1| 713|Homo sapiens LRP10 protein. 31 5.4
AL359699-2|CAH70392.1| 419|Homo sapiens U2AF homology motif (UH... 31 5.4
AJ536197-1|CAD60192.1| 419|Homo sapiens KIS protein protein. 31 5.4
EF531340-1|ABP87396.1| 409|Homo sapiens abraxas protein protein. 30 7.2
BC039573-1|AAH39573.1| 300|Homo sapiens CCDC98 protein protein. 30 7.2
BC031682-1|AAH31682.1| 450|Homo sapiens RBM42 protein protein. 30 7.2
BC004204-1|AAH04204.1| 480|Homo sapiens hypothetical protein MG... 30 7.2
BC002868-1|AAH02868.1| 451|Homo sapiens MGC10433 protein protein. 30 7.2
AY358576-1|AAQ88939.1| 409|Homo sapiens EGES496 protein. 30 7.2
AP001660-1|BAA95545.1| 281|Homo sapiens RBM11 protein. 30 7.2
AK023676-1|BAB14635.1| 300|Homo sapiens protein ( Homo sapiens ... 30 7.2
AK022704-1|BAB14189.1| 300|Homo sapiens LG6) mRNA. protein. 30 7.2
AC002115-1|AAB57629.1| 339|Homo sapiens F25451_2 protein. 30 7.2
BC126111-1|AAI26112.1| 418|Homo sapiens RBM44 protein protein. 30 9.5
AY279092-1|AAQ19181.1| 142|Homo sapiens chordin-related protein... 30 9.5
AK130316-1|BAC85324.1| 234|Homo sapiens protein ( Homo sapiens ... 30 9.5
>L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein.
Length = 530
Score = 127 bits (307), Expect = 3e-29
Identities = 62/86 (72%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRF-DADELDRAGIDLGA 177
GF+TF + AKKA+EQLNGFELAGRPMKVG+VTER D S++ F D+DEL+R GIDLG
Sbjct: 294 GFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGT 353
Query: 178 TGRLQLMFKLAEGTGLQIPPAAASVL 255
TGRLQLM +LAEGTGLQIPPAA L
Sbjct: 354 TGRLQLMARLAEGTGLQIPPAAQQAL 379
Score = 116 bits (279), Expect = 8e-26
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = +3
Query: 303 PIATQCFMLNNMFDPATETNPSWDIEIRDDVISECNKHGGVLHVYVDKASPQGNVYCKCP 482
P+ATQCF L+NMF+P TE WD EI+DDVI ECNKHGGV+H+YVDK S QGNVY KCP
Sbjct: 420 PLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCP 479
Query: 483 TIATAVASV 509
+IA A+A+V
Sbjct: 480 SIAAAIAAV 488
Score = 64.9 bits (151), Expect = 3e-10
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +2
Query: 509 NSLHGRWFAGRVITAAYVPLVNYHSLFPDAMTA 607
N+LHGRWFAG++ITAAYVPL YH+LFPD+MTA
Sbjct: 489 NALHGRWFAGKMITAAYVPLPTYHNLFPDSMTA 521
>L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein.
Length = 524
Score = 127 bits (307), Expect = 3e-29
Identities = 62/86 (72%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRF-DADELDRAGIDLGA 177
GF+TF + AKKA+EQLNGFELAGRPMKVG+VTER D S++ F D+DEL+R GIDLG
Sbjct: 294 GFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGT 353
Query: 178 TGRLQLMFKLAEGTGLQIPPAAASVL 255
TGRLQLM +LAEGTGLQIPPAA L
Sbjct: 354 TGRLQLMARLAEGTGLQIPPAAQQAL 379
Score = 116 bits (279), Expect = 8e-26
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = +3
Query: 303 PIATQCFMLNNMFDPATETNPSWDIEIRDDVISECNKHGGVLHVYVDKASPQGNVYCKCP 482
P+ATQCF L+NMF+P TE WD EI+DDVI ECNKHGGV+H+YVDK S QGNVY KCP
Sbjct: 414 PLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCP 473
Query: 483 TIATAVASV 509
+IA A+A+V
Sbjct: 474 SIAAAIAAV 482
Score = 64.9 bits (151), Expect = 3e-10
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +2
Query: 509 NSLHGRWFAGRVITAAYVPLVNYHSLFPDAMTA 607
N+LHGRWFAG++ITAAYVPL YH+LFPD+MTA
Sbjct: 483 NALHGRWFAGKMITAAYVPLPTYHNLFPDSMTA 515
>BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 127 bits (307), Expect = 3e-29
Identities = 62/86 (72%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRF-DADELDRAGIDLGA 177
GF+TF + AKKA+EQLNGFELAGRPMKVG+VTER D S++ F D+DEL+R GIDLG
Sbjct: 294 GFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGT 353
Query: 178 TGRLQLMFKLAEGTGLQIPPAAASVL 255
TGRLQLM +LAEGTGLQIPPAA L
Sbjct: 354 TGRLQLMARLAEGTGLQIPPAAQQAL 379
Score = 116 bits (279), Expect = 8e-26
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = +3
Query: 303 PIATQCFMLNNMFDPATETNPSWDIEIRDDVISECNKHGGVLHVYVDKASPQGNVYCKCP 482
P+ATQCF L+NMF+P TE WD EI+DDVI ECNKHGGV+H+YVDK S QGNVY KCP
Sbjct: 420 PLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCP 479
Query: 483 TIATAVASV 509
+IA A+A+V
Sbjct: 480 SIAAAIAAV 488
Score = 64.9 bits (151), Expect = 3e-10
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +2
Query: 509 NSLHGRWFAGRVITAAYVPLVNYHSLFPDAMTA 607
N+LHGRWFAG++ITAAYVPL YH+LFPD+MTA
Sbjct: 489 NALHGRWFAGKMITAAYVPLPTYHNLFPDSMTA 521
>BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein.
Length = 508
Score = 127 bits (307), Expect = 3e-29
Identities = 62/86 (72%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRF-DADELDRAGIDLGA 177
GF+TF + AKKA+EQLNGFELAGRPMKVG+VTER D S++ F D+DEL+R GIDLG
Sbjct: 272 GFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGT 331
Query: 178 TGRLQLMFKLAEGTGLQIPPAAASVL 255
TGRLQLM +LAEGTGLQIPPAA L
Sbjct: 332 TGRLQLMARLAEGTGLQIPPAAQQAL 357
Score = 116 bits (279), Expect = 8e-26
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = +3
Query: 303 PIATQCFMLNNMFDPATETNPSWDIEIRDDVISECNKHGGVLHVYVDKASPQGNVYCKCP 482
P+ATQCF L+NMF+P TE WD EI+DDVI ECNKHGGV+H+YVDK S QGNVY KCP
Sbjct: 398 PLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCP 457
Query: 483 TIATAVASV 509
+IA A+A+V
Sbjct: 458 SIAAAIAAV 466
Score = 64.9 bits (151), Expect = 3e-10
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +2
Query: 509 NSLHGRWFAGRVITAAYVPLVNYHSLFPDAMTA 607
N+LHGRWFAG++ITAAYVPL YH+LFPD+MTA
Sbjct: 467 NALHGRWFAGKMITAAYVPLPTYHNLFPDSMTA 499
>AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif protein
39 protein.
Length = 524
Score = 127 bits (307), Expect = 3e-29
Identities = 62/86 (72%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRF-DADELDRAGIDLGA 177
GF+TF + AKKA+EQLNGFELAGRPMKVG+VTER D S++ F D+DEL+R GIDLG
Sbjct: 294 GFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGT 353
Query: 178 TGRLQLMFKLAEGTGLQIPPAAASVL 255
TGRLQLM +LAEGTGLQIPPAA L
Sbjct: 354 TGRLQLMARLAEGTGLQIPPAAQQAL 379
Score = 116 bits (279), Expect = 8e-26
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = +3
Query: 303 PIATQCFMLNNMFDPATETNPSWDIEIRDDVISECNKHGGVLHVYVDKASPQGNVYCKCP 482
P+ATQCF L+NMF+P TE WD EI+DDVI ECNKHGGV+H+YVDK S QGNVY KCP
Sbjct: 414 PLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCP 473
Query: 483 TIATAVASV 509
+IA A+A+V
Sbjct: 474 SIAAAIAAV 482
Score = 64.9 bits (151), Expect = 3e-10
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +2
Query: 509 NSLHGRWFAGRVITAAYVPLVNYHSLFPDAMTA 607
N+LHGRWFAG++ITAAYVPL YH+LFPD+MTA
Sbjct: 483 NALHGRWFAGKMITAAYVPLPTYHNLFPDSMTA 515
>AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 127 bits (307), Expect = 3e-29
Identities = 62/86 (72%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRF-DADELDRAGIDLGA 177
GF+TF + AKKA+EQLNGFELAGRPMKVG+VTER D S++ F D+DEL+R GIDLG
Sbjct: 294 GFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGT 353
Query: 178 TGRLQLMFKLAEGTGLQIPPAAASVL 255
TGRLQLM +LAEGTGLQIPPAA L
Sbjct: 354 TGRLQLMARLAEGTGLQIPPAAQQAL 379
Score = 116 bits (279), Expect = 8e-26
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = +3
Query: 303 PIATQCFMLNNMFDPATETNPSWDIEIRDDVISECNKHGGVLHVYVDKASPQGNVYCKCP 482
P+ATQCF L+NMF+P TE WD EI+DDVI ECNKHGGV+H+YVDK S QGNVY KCP
Sbjct: 420 PLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCP 479
Query: 483 TIATAVASV 509
+IA A+A+V
Sbjct: 480 SIAAAIAAV 488
Score = 64.9 bits (151), Expect = 3e-10
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +2
Query: 509 NSLHGRWFAGRVITAAYVPLVNYHSLFPDAMTA 607
N+LHGRWFAG++ITAAYVPL YH+LFPD+MTA
Sbjct: 489 NALHGRWFAGKMITAAYVPLPTYHNLFPDSMTA 521
>BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 124 bits (300), Expect = 2e-28
Identities = 61/86 (70%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRF-DADELDRAGIDLGA 177
GF+TF + AKKA+EQLNGFELAGRPMKVG+VTER D S++ F D+D L+R GIDLG
Sbjct: 137 GFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDGLERTGIDLGT 196
Query: 178 TGRLQLMFKLAEGTGLQIPPAAASVL 255
TGRLQLM +LAEGTGLQIPPAA L
Sbjct: 197 TGRLQLMARLAEGTGLQIPPAAQQAL 222
Score = 116 bits (279), Expect = 8e-26
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = +3
Query: 303 PIATQCFMLNNMFDPATETNPSWDIEIRDDVISECNKHGGVLHVYVDKASPQGNVYCKCP 482
P+ATQCF L+NMF+P TE WD EI+DDVI ECNKHGGV+H+YVDK S QGNVY KCP
Sbjct: 263 PLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCP 322
Query: 483 TIATAVASV 509
+IA A+A+V
Sbjct: 323 SIAAAIAAV 331
Score = 64.9 bits (151), Expect = 3e-10
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +2
Query: 509 NSLHGRWFAGRVITAAYVPLVNYHSLFPDAMTA 607
N+LHGRWFAG++ITAAYVPL YH+LFPD+MTA
Sbjct: 332 NALHGRWFAGKMITAAYVPLPTYHNLFPDSMTA 364
>AL357374-7|CAI13605.1| 336|Homo sapiens RNA binding motif protein
39 protein.
Length = 336
Score = 120 bits (289), Expect = 5e-27
Identities = 60/85 (70%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRF-DADELDRAGIDLGAT 180
F F + AKKA+EQLNGFELAGRPMKVG+VTER D S++ F D+DEL+R GIDLG T
Sbjct: 145 FGRFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTT 204
Query: 181 GRLQLMFKLAEGTGLQIPPAAASVL 255
GRLQLM +LAEGTGLQIPPAA L
Sbjct: 205 GRLQLMARLAEGTGLQIPPAAQQAL 229
Score = 114 bits (274), Expect = 3e-25
Identities = 47/67 (70%), Positives = 55/67 (82%)
Frame = +3
Query: 303 PIATQCFMLNNMFDPATETNPSWDIEIRDDVISECNKHGGVLHVYVDKASPQGNVYCKCP 482
P+ATQCF L+NMF+P TE WD EI+DDVI ECNKHGGV+H+YVDK S QGNVY KCP
Sbjct: 270 PLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCP 329
Query: 483 TIATAVA 503
+IA A+A
Sbjct: 330 SIAAAIA 336
>BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif protein
23 protein.
Length = 423
Score = 95.9 bits (228), Expect = 1e-19
Identities = 51/92 (55%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRF-DADELDRAGIDLG- 174
GF+TF + A++A+EQLNGFELAGRPM+VG+VTER DGG+ F D D+ +DLG
Sbjct: 291 GFITFSDSECARRALEQLNGFELAGRPMRVGHVTERLDGGTDITFPDGDQ----ELDLGS 346
Query: 175 ATGRLQLMFKLAEGTGLQIPPAAASVLWGVVQ 270
A GR QLM KLAEG G+Q+P AA+ Q
Sbjct: 347 AGGRFQLMAKLAEGAGIQLPSTAAAAAAAAAQ 378
>BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif protein
23 protein.
Length = 424
Score = 95.5 bits (227), Expect = 2e-19
Identities = 50/85 (58%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRF-DADELDRAGIDLG- 174
GF+TF + A++A+EQLNGFELAGRPM+VG+VTER DGG+ F D D+ +DLG
Sbjct: 291 GFITFSDSECARRALEQLNGFELAGRPMRVGHVTERLDGGTDITFPDGDQ----ELDLGS 346
Query: 175 ATGRLQLMFKLAEGTGLQIPPAAAS 249
A GR QLM KLAEG G+Q+P AA+
Sbjct: 347 AGGRFQLMAKLAEGAGIQLPSTAAA 371
>AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens
cDNA FLJ10482 fis, clone NT2RP2000153, weakly similar to
GAR2 PROTEIN. ).
Length = 406
Score = 95.5 bits (227), Expect = 2e-19
Identities = 50/85 (58%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRF-DADELDRAGIDLG- 174
GF+TF + A++A+EQLNGFELAGRPM+VG+VTER DGG+ F D D+ +DLG
Sbjct: 273 GFITFSDSECARRALEQLNGFELAGRPMRVGHVTERLDGGTDITFPDGDQ----ELDLGS 328
Query: 175 ATGRLQLMFKLAEGTGLQIPPAAAS 249
A GR QLM KLAEG G+Q+P AA+
Sbjct: 329 AGGRFQLMAKLAEGAGIQLPSTAAA 353
>AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein.
Length = 418
Score = 95.5 bits (227), Expect = 2e-19
Identities = 50/85 (58%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRF-DADELDRAGIDLG- 174
GF+TF + A++A+EQLNGFELAGRPM+VG+VTER DGG+ F D D+ +DLG
Sbjct: 285 GFITFSDSECARRALEQLNGFELAGRPMRVGHVTERLDGGTDITFPDGDQ----ELDLGS 340
Query: 175 ATGRLQLMFKLAEGTGLQIPPAAAS 249
A GR QLM KLAEG G+Q+P AA+
Sbjct: 341 AGGRFQLMAKLAEGAGIQLPSTAAA 365
>CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein.
Length = 423
Score = 93.5 bits (222), Expect = 7e-19
Identities = 50/92 (54%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRF-DADELDRAGIDLG- 174
G +TF + A++A+EQLNGFELAGRPM+VG+VTER DGG+ F D D+ +DLG
Sbjct: 291 GLITFSDSECARRALEQLNGFELAGRPMRVGHVTERLDGGTDITFPDGDQ----ELDLGS 346
Query: 175 ATGRLQLMFKLAEGTGLQIPPAAASVLWGVVQ 270
A GR QLM KLAEG G+Q+P AA+ Q
Sbjct: 347 AGGRFQLMAKLAEGAGIQLPSTAAAAAAAAAQ 378
>AF087905-1|AAP97203.1| 425|Homo sapiens splicing factor SF2
protein.
Length = 425
Score = 74.5 bits (175), Expect = 3e-13
Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLN-GFELAGRPMKVGNVTERADGGSSTRF-DADELDRAGIDLG 174
GF+TF + A++A + G L GRPM+VG+VTER DGG+ F D D+ +DLG
Sbjct: 291 GFITFSDSECARRACGTVEWGLSLLGRPMRVGHVTERLDGGTDITFPDGDQ----ELDLG 346
Query: 175 -ATGRLQLMFKLAEGTGLQIPPAAAS 249
A GR QLM KLAEG G+Q+P AA+
Sbjct: 347 SAGGRFQLMAKLAEGAGIQLPSTAAA 372
>AL137533-1|CAB70796.1| 198|Homo sapiens hypothetical protein
protein.
Length = 198
Score = 61.3 bits (142), Expect = 3e-09
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +3
Query: 300 PPIATQCFMLNNMFDPATETNPSWDIEIRDDVISECNKHGGVLHVYVDKASPQGNVYCKC 479
P T C + NMFDP E W + I++ ++ +C+ + G++H+ VDK S +G VY KC
Sbjct: 66 PNSLTPCLKIRNMFDPVMEIGDQWHLAIQEAILEKCSDNDGIVHIAVDKNSREGCVYVKC 125
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 512 SLHGRWFAGRVITAAYVPLVNYHSLFPDAMTA 607
+LHG WF G+++T Y+ L YH FP A+T+
Sbjct: 137 ALHGSWFDGKLVTVKYLRLDRYHHRFPQALTS 168
>AF263918-1|AAF73293.1| 910|Homo sapiens inner nuclear membrane
protein protein.
Length = 910
Score = 61.3 bits (142), Expect = 3e-09
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +3
Query: 300 PPIATQCFMLNNMFDPATETNPSWDIEIRDDVISECNKHGGVLHVYVDKASPQGNVYCKC 479
P T C + NMFDP E W + I++ ++ +C+ + G++H+ VDK S +G VY KC
Sbjct: 778 PNSLTPCLKIRNMFDPVMEIGDQWHLAIQEAILEKCSDNDGIVHIAVDKNSREGCVYVKC 837
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 512 SLHGRWFAGRVITAAYVPLVNYHSLFPDAMTA 607
+LHG WF G+++T Y+ L YH FP A+T+
Sbjct: 849 ALHGSWFDGKLVTVKYLRLDRYHHRFPQALTS 880
>AF112299-1|AAD31593.2| 911|Homo sapiens integral inner nuclear
membrane protein MAN1 protein.
Length = 911
Score = 61.3 bits (142), Expect = 3e-09
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +3
Query: 300 PPIATQCFMLNNMFDPATETNPSWDIEIRDDVISECNKHGGVLHVYVDKASPQGNVYCKC 479
P T C + NMFDP E W + I++ ++ +C+ + G++H+ VDK S +G VY KC
Sbjct: 779 PNSLTPCLKIRNMFDPVMEIGDQWHLAIQEAILEKCSDNDGIVHIAVDKNSREGCVYVKC 838
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 512 SLHGRWFAGRVITAAYVPLVNYHSLFPDAMTA 607
+LHG WF G+++T Y+ L YH FP A+T+
Sbjct: 850 ALHGSWFDGKLVTVKYLRLDRYHHRFPQALTS 881
>AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional
coactivator ALY protein.
Length = 233
Score = 41.1 bits (92), Expect = 0.004
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = +1
Query: 13 FHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRFDADELDRAGI 165
F +DA KAM+Q NGF L GRPM + VT + D + R A ++R G+
Sbjct: 129 FERKADALKAMKQYNGFPLDGRPMNIQLVTSQID---AQRRPAQSVNRGGM 176
>BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein.
Length = 257
Score = 38.3 bits (85), Expect = 0.027
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +1
Query: 13 FHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRFDADELDRAGI 165
F +DA KAM+Q NG L GRPM + VT + D + R A ++R G+
Sbjct: 153 FERKADALKAMKQYNGVPLDGRPMNIQLVTSQID---AQRRPAQSVNRGGM 200
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 36.7 bits (81), Expect = 0.083
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD 114
GF++F DA+KA++++NG EL G+ + VG ++ +
Sbjct: 209 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 246
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 36.7 bits (81), Expect = 0.083
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD 114
GF++F DA+KA++++NG EL G+ + VG ++ +
Sbjct: 231 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 268
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 36.7 bits (81), Expect = 0.083
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD 114
GF++F DA+KA++++NG EL G+ + VG ++ +
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 36.7 bits (81), Expect = 0.083
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD 114
GF++F DA+KA++++NG EL G+ + VG ++ +
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 36.7 bits (81), Expect = 0.083
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD 114
GF++F DA+KA++++NG EL G+ + VG ++ +
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 36.7 bits (81), Expect = 0.083
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD 114
GF++F DA+KA++++NG EL G+ + VG ++ +
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 36.7 bits (81), Expect = 0.083
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD 114
GF++F DA+KA++++NG EL G+ + VG ++ +
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 36.7 bits (81), Expect = 0.083
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD 114
GF++F DA+KA++++NG EL G+ + VG ++ +
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 36.7 bits (81), Expect = 0.083
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD 114
GF++F DA+KA++++NG EL G+ + VG ++ +
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 36.7 bits (81), Expect = 0.083
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD 114
GF++F DA+KA++++NG EL G+ + VG ++ +
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 36.7 bits (81), Expect = 0.083
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD 114
GF++F DA+KA++++NG EL G+ + VG ++ +
Sbjct: 234 GFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
>U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein.
Length = 282
Score = 35.9 bits (79), Expect = 0.14
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVG-NVTERA 111
F+ F D+K+AME+ NG EL GR ++V ++T+RA
Sbjct: 164 FVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRA 200
>BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha
protein.
Length = 282
Score = 35.9 bits (79), Expect = 0.14
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVG-NVTERA 111
F+ F D+K+AME+ NG EL GR ++V ++T+RA
Sbjct: 164 FVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRA 200
>AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein.
Length = 282
Score = 35.9 bits (79), Expect = 0.14
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVG-NVTERA 111
F+ F D+K+AME+ NG EL GR ++V ++T+RA
Sbjct: 164 FVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRA 200
>AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activating
protein protein.
Length = 282
Score = 35.9 bits (79), Expect = 0.14
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVG-NVTERA 111
F+ F D+K+AME+ NG EL GR ++V ++T+RA
Sbjct: 164 FVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRA 200
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.19
Identities = 15/55 (27%), Positives = 33/55 (60%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRFDADELDRAGI 165
GF+++ DA KA+E++NG E++G+ + VG ++ + + + ++L + I
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERI 288
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.19
Identities = 15/55 (27%), Positives = 33/55 (60%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRFDADELDRAGI 165
GF+++ DA KA+E++NG E++G+ + VG ++ + + + ++L + I
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERI 288
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 35.5 bits (78), Expect = 0.19
Identities = 15/55 (27%), Positives = 33/55 (60%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRFDADELDRAGI 165
GF+++ DA KA+E++NG E++G+ + VG ++ + + + ++L + I
Sbjct: 45 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERI 99
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.19
Identities = 15/55 (27%), Positives = 33/55 (60%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRFDADELDRAGI 165
GF+++ DA KA+E++NG E++G+ + VG ++ + + + ++L + I
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERI 288
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.19
Identities = 15/55 (27%), Positives = 33/55 (60%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRFDADELDRAGI 165
GF+++ DA KA+E++NG E++G+ + VG ++ + + + ++L + I
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERI 288
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 35.5 bits (78), Expect = 0.19
Identities = 15/55 (27%), Positives = 33/55 (60%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRFDADELDRAGI 165
GF+++ DA KA+E++NG E++G+ + VG ++ + + + ++L + I
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERI 288
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.19
Identities = 15/55 (27%), Positives = 33/55 (60%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRFDADELDRAGI 165
GF+++ DA KA+E++NG E++G+ + VG ++ + + + ++L + I
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERI 288
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.19
Identities = 15/55 (27%), Positives = 33/55 (60%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRFDADELDRAGI 165
GF+++ DA KA+E++NG E++G+ + VG ++ + + + ++L + I
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERI 288
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 35.5 bits (78), Expect = 0.19
Identities = 15/55 (27%), Positives = 33/55 (60%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRFDADELDRAGI 165
GF+++ DA KA+E++NG E++G+ + VG ++ + + + ++L + I
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERI 288
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 35.5 bits (78), Expect = 0.19
Identities = 15/55 (27%), Positives = 33/55 (60%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRFDADELDRAGI 165
GF+++ DA KA+E++NG E++G+ + VG ++ + + + ++L + I
Sbjct: 13 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERI 67
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 35.5 bits (78), Expect = 0.19
Identities = 15/55 (27%), Positives = 33/55 (60%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRFDADELDRAGI 165
GF+++ DA KA+E++NG E++G+ + VG ++ + + + ++L + I
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERI 288
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.19
Identities = 15/55 (27%), Positives = 33/55 (60%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRFDADELDRAGI 165
GF+++ DA KA+E++NG E++G+ + VG ++ + + + ++L + I
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERI 288
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 35.5 bits (78), Expect = 0.19
Identities = 15/55 (27%), Positives = 33/55 (60%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRFDADELDRAGI 165
GF+++ DA KA+E++NG E++G+ + VG ++ + + + ++L + I
Sbjct: 234 GFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERI 288
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 35.1 bits (77), Expect = 0.25
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGS 123
GF+TF + DAK AM +NG + GR ++V + +D S
Sbjct: 50 GFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRS 90
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 35.1 bits (77), Expect = 0.25
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGS 123
GF+TF + DAK AM +NG + GR ++V + +D S
Sbjct: 50 GFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRS 90
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 35.1 bits (77), Expect = 0.25
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGS 123
GF+TF + DAK AM +NG + GR ++V + +D S
Sbjct: 50 GFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRS 90
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 35.1 bits (77), Expect = 0.25
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGS 123
GF+TF + DAK AM +NG + GR ++V + +D S
Sbjct: 50 GFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRS 90
>AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RNA
binding protein protein.
Length = 172
Score = 35.1 bits (77), Expect = 0.25
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGS 123
GF+TF + DAK AM +NG + GR ++V + +D S
Sbjct: 50 GFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRS 90
>AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 35.1 bits (77), Expect = 0.25
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGS 123
GF+TF + DAK AM +NG + GR ++V + +D S
Sbjct: 50 GFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRS 90
>U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein.
Length = 288
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVG-NVTER 108
F+ F + DAK+A E+ NG EL GR ++V ++T+R
Sbjct: 163 FVYFENVDDAKEAKERANGMELDGRRIRVDFSITKR 198
>U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein.
Length = 288
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVG-NVTER 108
F+ F + DAK+A E+ NG EL GR ++V ++T+R
Sbjct: 163 FVYFENVDDAKEAKERANGMELDGRRIRVDFSITKR 198
>BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVG-NVTER 108
F+ F + DAK+A E+ NG EL GR ++V ++T+R
Sbjct: 163 FVYFENVDDAKEAKERANGMELDGRRIRVDFSITKR 198
>BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVG-NVTER 108
F+ F + DAK+A E+ NG EL GR ++V ++T+R
Sbjct: 163 FVYFENVDDAKEAKERANGMELDGRRIRVDFSITKR 198
>BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVG-NVTER 108
F+ F + DAK+A E+ NG EL GR ++V ++T+R
Sbjct: 163 FVYFENVDDAKEAKERANGMELDGRRIRVDFSITKR 198
>AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ40872 fis, clone TUTER2000283, highly similar to
Homo sapiens transformer-2-beta (SFRS10) gene. ).
Length = 252
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVG-NVTER 108
F+ F + DAK+A E+ NG EL GR ++V ++T+R
Sbjct: 127 FVYFENVDDAKEAKERANGMELDGRRIRVDFSITKR 162
>AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 386
Score = 33.9 bits (74), Expect = 0.58
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERA 111
F+TF +DAK A+ +NG L G+ +KV T+ A
Sbjct: 47 FVTFESPADAKAAVRDMNGKSLDGKAIKVAQATKPA 82
>AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isoform
3 protein.
Length = 188
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVG-NVTER 108
F+ F + DAK+A E+ NG EL GR ++V ++T+R
Sbjct: 63 FVYFENVDDAKEAKERANGMELDGRRIRVDFSITKR 98
>AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isoform
1 protein.
Length = 288
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVG-NVTER 108
F+ F + DAK+A E+ NG EL GR ++V ++T+R
Sbjct: 163 FVYFENVDDAKEAKERANGMELDGRRIRVDFSITKR 198
>AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) va protein.
Length = 278
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVG-NVTER 108
F+ F + DAK+A E+ NG EL GR ++V ++T+R
Sbjct: 151 FVYFENVDDAKEAKERANGMELDGRRIRVDFSITKR 186
>BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif protein,
X-linked-like 2 protein.
Length = 392
Score = 33.1 bits (72), Expect = 1.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERA 111
F+TF +DAK A +NG L G+ +KV T+ A
Sbjct: 53 FVTFESPADAKAAARDMNGKSLDGKAIKVAQATKPA 88
>AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 33.1 bits (72), Expect = 1.0
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGS--STRFDADELDR 156
GF+ F +A+KA+ +NG E++GR + G +R + + RF+ + DR
Sbjct: 234 GFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDR 287
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 33.1 bits (72), Expect = 1.0
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGS--STRFDADELDR 156
GF+ F +A+KA+ +NG E++GR + G +R + + RF+ + DR
Sbjct: 234 GFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDR 287
>AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 33.1 bits (72), Expect = 1.0
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGS--STRFDADELDR 156
GF+ F +A+KA+ +NG E++GR + G +R + + RF+ + DR
Sbjct: 234 GFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDR 287
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 33.1 bits (72), Expect = 1.0
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGS--STRFDADELDR 156
GF+ F +A+KA+ +NG E++GR + G +R + + RF+ + DR
Sbjct: 234 GFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDR 287
>AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens
cDNA FLJ13071 fis, clone NT2RP3001792, moderately
similar to HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN M. ).
Length = 576
Score = 33.1 bits (72), Expect = 1.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTR 132
G + F KKA+E +N ++L+GRP+ N+ E DG ++ R
Sbjct: 144 GVVEFKDEEFVKKALETMNKYDLSGRPL---NIKEDPDGENARR 184
>AF069682-1|AAC24858.2| 392|Homo sapiens testes specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 392
Score = 33.1 bits (72), Expect = 1.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERA 111
F+TF +DAK A +NG L G+ +KV T+ A
Sbjct: 53 FVTFESPADAKAAARDMNGKSLDGKAIKVAQATKPA 88
>AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein.
Length = 620
Score = 33.1 bits (72), Expect = 1.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTR 132
G + F KKA+E +N ++L+GRP+ N+ E DG ++ R
Sbjct: 164 GVVEFKDEEFVKKALETMNKYDLSGRPL---NIKEDPDGENARR 204
>X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein.
Length = 419
Score = 32.3 bits (70), Expect = 1.8
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKV 90
F+TF + +DAK A + +NG L G+ +KV
Sbjct: 52 FITFENPADAKNAAKDMNGTSLHGKAIKV 80
>U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein.
Length = 157
Score = 32.3 bits (70), Expect = 1.8
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRFDA 141
GF+TF + A AM +NG L GR ++V + + A G F A
Sbjct: 50 GFITFTNPEHASVAMRAMNGESLDGRQIRVDHAGKSARGTRGGGFGA 96
>BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif protein,
Y-linked, family 1, member F protein.
Length = 496
Score = 32.3 bits (70), Expect = 1.8
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKV 90
F+TF + +DAK A + +NG L G+ +KV
Sbjct: 52 FITFENPADAKNAAKDMNGTSLHGKAIKV 80
>BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1,
RRM) protein 3 protein.
Length = 157
Score = 32.3 bits (70), Expect = 1.8
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERADGGSSTRFDA 141
GF+TF + A AM +NG L GR ++V + + A G F A
Sbjct: 50 GFITFTNPEHASVAMRAMNGESLDGRQIRVDHAGKSARGTRGGGFGA 96
>X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA for
YRRM1. ).
Length = 496
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKV 90
F+TF + +DAK A + +NG L G+ +KV
Sbjct: 52 FITFENPADAKNAAKDMNGKSLHGKAIKV 80
>U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognition
motif protein protein.
Length = 220
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKV 90
F+TF + +DAK A + +NG L G+ +KV
Sbjct: 52 FITFENPADAKNAAKDMNGKSLHGKAIKV 80
>BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein.
Length = 459
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKV 90
F+TF + +DAK A + +NG L G+ +KV
Sbjct: 52 FITFENPADAKNAAKDMNGKSLHGKAIKV 80
>Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein.
Length = 391
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTE 105
F+TF +DAK A +NG L G+ +KV T+
Sbjct: 53 FVTFESPADAKDAARDMNGKSLDGKAIKVEQATK 86
>X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein
protein.
Length = 525
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 7 LTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD---GGSSTR 132
++F AK A++ +G E +G P+KV T RAD GG + R
Sbjct: 338 VSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGR 382
>U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein.
Length = 528
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 7 LTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD---GGSSTR 132
++F AK A++ +G E +G P+KV T RAD GG + R
Sbjct: 342 VSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGR 386
>S62140-1|AAB27102.1| 526|Homo sapiens TLS protein.
Length = 526
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 7 LTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD---GGSSTR 132
++F AK A++ +G E +G P+KV T RAD GG + R
Sbjct: 339 VSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGR 383
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTE 105
F+TF +DAK A +NG L G+ +KV T+
Sbjct: 53 FVTFESPADAKDAARDMNGKSLDGKAIKVEQATK 86
>CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein.
Length = 526
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 7 LTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD---GGSSTR 132
++F AK A++ +G E +G P+KV T RAD GG + R
Sbjct: 339 VSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGR 383
>BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from
t(12;16) malignant liposarcoma protein.
Length = 526
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 7 LTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD---GGSSTR 132
++F AK A++ +G E +G P+KV T RAD GG + R
Sbjct: 339 VSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGR 383
>BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 7 LTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD---GGSSTR 132
++F AK A++ +G E +G P+KV T RAD GG + R
Sbjct: 339 VSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGR 383
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTE 105
F+TF +DAK A +NG L G+ +KV T+
Sbjct: 53 FVTFESPADAKDAARDMNGKSLDGKAIKVEQATK 86
>BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTE 105
F+TF +DAK A +NG L G+ +KV T+
Sbjct: 53 FVTFESPADAKDAARDMNGKSLDGKAIKVEQATK 86
>BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTE 105
F+TF +DAK A +NG L G+ +KV T+
Sbjct: 53 FVTFESPADAKDAARDMNGKSLDGKAIKVEQATK 86
>BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 7 LTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD---GGSSTR 132
++F AK A++ +G E +G P+KV T RAD GG + R
Sbjct: 339 VSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGR 383
>BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 7 LTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD---GGSSTR 132
++F AK A++ +G E +G P+KV T RAD GG + R
Sbjct: 339 VSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGR 383
>AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear
ribonucleoprotein G protein.
Length = 391
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTE 105
F+TF +DAK A +NG L G+ +KV T+
Sbjct: 53 FVTFESPADAKDAARDMNGKSLDGKAIKVEQATK 86
>AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTE 105
F+TF +DAK A +NG L G+ +KV T+
Sbjct: 53 FVTFESPADAKDAARDMNGKSLDGKAIKVEQATK 86
>AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 159
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTE 105
F+TF +DAK A +NG L G+ +KV T+
Sbjct: 53 FVTFESPADAKDAARDMNGKSLDGKAIKVEQATK 86
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTE 105
F+TF +DAK A +NG L G+ +KV T+
Sbjct: 53 FVTFESPADAKDAARDMNGKSLDGKAIKVEQATK 86
>AJ549096-1|CAD79346.1| 157|Homo sapiens BBF2H7/FUS protein
protein.
Length = 157
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 7 LTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD---GGSSTR 132
++F AK A++ +G E +G P+KV T RAD GG + R
Sbjct: 72 VSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGR 116
>AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein.
Length = 391
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKVGNVTE 105
F+TF +DAK A +NG L G+ +KV T+
Sbjct: 53 FVTFESPADAKDAARDMNGKSLDGKAIKVEQATK 86
>AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein.
Length = 525
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 7 LTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD---GGSSTR 132
++F AK A++ +G E +G P+KV T RAD GG + R
Sbjct: 338 VSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGR 382
>AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein.
Length = 526
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 7 LTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD---GGSSTR 132
++F AK A++ +G E +G P+KV T RAD GG + R
Sbjct: 339 VSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGR 383
>AB208902-1|BAD92139.1| 300|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) isoform a variant
protein.
Length = 300
Score = 31.5 bits (68), Expect = 3.1
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 7 LTFHHASDAKKAMEQLNGFELAGRPMKVGNVTERAD---GGSSTR 132
++F AK A++ +G E +G P+KV T RAD GG + R
Sbjct: 113 VSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGR 157
>BC112305-1|AAI12306.1| 300|Homo sapiens hydroxysteroid (17-beta)
dehydrogenase 13 protein.
Length = 300
Score = 31.1 bits (67), Expect = 4.1
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 369 WDIEIR--DDVISECNKHGGVLHVYVDKASPQGNVYCKCPTIATAVASVTV 515
WDI R ++ +EC K G H YV S + +Y + V VT+
Sbjct: 66 WDINKRGVEETAAECRKLGVTAHAYVVDCSNREEIYRSLNQVKKEVGDVTI 116
>BC112303-1|AAI12304.1| 300|Homo sapiens hydroxysteroid (17-beta)
dehydrogenase 13 protein.
Length = 300
Score = 31.1 bits (67), Expect = 4.1
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 369 WDIEIR--DDVISECNKHGGVLHVYVDKASPQGNVYCKCPTIATAVASVTV 515
WDI R ++ +EC K G H YV S + +Y + V VT+
Sbjct: 66 WDINKRGVEETAAECRKLGVTAHAYVVDCSNREEIYRSLNQVKKEVGDVTI 116
>BC034381-1|AAH34381.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 31.1 bits (67), Expect = 4.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKV 90
F+ F H AM LNG +L GRP+K+
Sbjct: 54 FVNFKHEVSVPYAMNLLNGIKLYGRPIKI 82
>AY358575-1|AAQ88938.1| 300|Homo sapiens NIIL497 protein.
Length = 300
Score = 31.1 bits (67), Expect = 4.1
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 369 WDIEIR--DDVISECNKHGGVLHVYVDKASPQGNVYCKCPTIATAVASVTV 515
WDI R ++ +EC K G H YV S + +Y + V VT+
Sbjct: 66 WDINKRGVEETAAECRKLGVTAHAYVVDCSNREEIYRSLNQVKKEVGDVTI 116
>AY268355-1|AAP42289.1| 300|Homo sapiens short-chain
dehydrogenase/reductase 9 protein.
Length = 300
Score = 31.1 bits (67), Expect = 4.1
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 369 WDIEIR--DDVISECNKHGGVLHVYVDKASPQGNVYCKCPTIATAVASVTV 515
WDI R ++ +EC K G H YV S + +Y + V VT+
Sbjct: 66 WDINKRGVEETAAECRKLGVTAHAYVVDCSNREEIYRSLNQVKKEVGDVTI 116
>AY186249-1|AAO72313.1| 300|Homo sapiens 17-beta hydroxysteroid
dehydrogenase protein.
Length = 300
Score = 31.1 bits (67), Expect = 4.1
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 369 WDIEIR--DDVISECNKHGGVLHVYVDKASPQGNVYCKCPTIATAVASVTV 515
WDI R ++ +EC K G H YV S + +Y + V VT+
Sbjct: 66 WDINKRGVEETAAECRKLGVTAHAYVVDCSNREEIYRSLNQVKKEVGDVTI 116
>AK002015-1|BAA92036.1| 267|Homo sapiens protein ( Homo sapiens
cDNA FLJ11153 fis, clone PLACE1006917, weakly similar to
HSH49 PROTEIN. ).
Length = 267
Score = 31.1 bits (67), Expect = 4.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKV 90
F+ F H AM LNG +L GRP+K+
Sbjct: 54 FVNFKHEVSVPYAMNLLNGIKLYGRPIKI 82
>AF156098-1|AAD39257.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 31.1 bits (67), Expect = 4.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKV 90
F+ F H AM LNG +L GRP+K+
Sbjct: 54 FVNFKHEVSVPYAMNLLNGIKLYGRPIKI 82
>AB209753-1|BAD92990.1| 155|Homo sapiens Hypothetical protein
FLJ11153 variant protein.
Length = 155
Score = 31.1 bits (67), Expect = 4.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKV 90
F+ F H AM LNG +L GRP+K+
Sbjct: 60 FVNFKHEVSVPYAMNLLNGIKLYGRPIKI 88
>AB073347-1|BAD38632.1| 300|Homo sapiens putative protein product
of HMFN0376 protein.
Length = 300
Score = 31.1 bits (67), Expect = 4.1
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 369 WDIEIR--DDVISECNKHGGVLHVYVDKASPQGNVYCKCPTIATAVASVTV 515
WDI R ++ +EC K G H YV S + +Y + V VT+
Sbjct: 66 WDINKRGVEETAAECRKLGVTAHAYVVDCSNREEIYRSLNQVKKEVGDVTI 116
>BC113716-1|AAI13717.1| 713|Homo sapiens low density lipoprotein
receptor-related protein 10 protein.
Length = 713
Score = 30.7 bits (66), Expect = 5.4
Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = -1
Query: 678 YILILQIEFVWSSYRCLEGNSKLSAVIA--SGNKE**LTSGTYAAVITRPANHLPCKLLR 505
+++ LQ EF ++RC+ + V A G+ E +S + + RP LPC +
Sbjct: 137 WLMCLQEEFQCLNHRCVSAVQRCDGVDACGDGSDEAGCSSDPFPGLTPRPVPSLPCNVTL 196
Query: 504 RQRPSLLSDTCSTHFPEAMLYQHTH 430
+ S TH Q H
Sbjct: 197 EDFYGVFSSPGYTHLASVSHPQSCH 221
>BC113714-1|AAI13715.1| 713|Homo sapiens low density lipoprotein
receptor-related protein 10 protein.
Length = 713
Score = 30.7 bits (66), Expect = 5.4
Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = -1
Query: 678 YILILQIEFVWSSYRCLEGNSKLSAVIA--SGNKE**LTSGTYAAVITRPANHLPCKLLR 505
+++ LQ EF ++RC+ + V A G+ E +S + + RP LPC +
Sbjct: 137 WLMCLQEEFQCLNHRCVSAVQRCDGVDACGDGSDEAGCSSDPFPGLTPRPVPSLPCNVTL 196
Query: 504 RQRPSLLSDTCSTHFPEAMLYQHTH 430
+ S TH Q H
Sbjct: 197 EDFYGVFSSPGYTHLASVSHPQSCH 221
>BC070262-1|AAH70262.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 4 FLTFHHASDAKKAMEQLNGFELAGRPMKV 90
F+ F H AM LNG L GRP+K+
Sbjct: 54 FVNFKHEVSVPYAMNLLNGIRLYGRPIKI 82
>BC064901-1|AAH64901.1| 457|Homo sapiens LRP10 protein protein.
Length = 457
Score = 30.7 bits (66), Expect = 5.4
Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = -1
Query: 678 YILILQIEFVWSSYRCLEGNSKLSAVIA--SGNKE**LTSGTYAAVITRPANHLPCKLLR 505
+++ LQ EF ++RC+ + V A G+ E +S + + RP LPC +
Sbjct: 38 WLMCLQEEFQCLNHRCVSAVQRCDGVDACGDGSDEAGCSSDPFPGLTPRPVPSLPCNVTL 97
Query: 504 RQRPSLLSDTCSTHFPEAMLYQHTH 430
+ S TH Q H
Sbjct: 98 EDFYGVFSSPGYTHLASVSHPQSCH 122
>BC014917-1|AAH14917.1| 314|Homo sapiens UHMK1 protein protein.
Length = 314
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 324 MLNNMFDPATETNPSWDIEIRDDVISECNKHGGVLHVYVDKASP-QGNVYCKCPTIATAV 500
+LN + D E ++ ++ +DV EC K+G V+ + V K +P +G V+ + +
Sbjct: 220 LLNVLDDDYLENEEEYE-DVVEDVKEECQKYGPVVSLLVPKENPGRGQVFVEYANAGDSK 278
Query: 501 ASVTVCT 521
A+ + T
Sbjct: 279 AAQKLLT 285
>AY358399-1|AAQ88765.1| 713|Homo sapiens LRP10 protein.
Length = 713
Score = 30.7 bits (66), Expect = 5.4
Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = -1
Query: 678 YILILQIEFVWSSYRCLEGNSKLSAVIA--SGNKE**LTSGTYAAVITRPANHLPCKLLR 505
+++ LQ EF ++RC+ + V A G+ E +S + + RP LPC +
Sbjct: 137 WLMCLQEEFQCLNHRCVSAVQRCDGVDACGDGSDEAGCSSDPFPGLTPRPVPSLPCNVTL 196
Query: 504 RQRPSLLSDTCSTHFPEAMLYQHTH 430
+ S TH Q H
Sbjct: 197 EDFYGVFSSPGYTHLASVSHPQSCH 221
>AL359699-2|CAH70392.1| 419|Homo sapiens U2AF homology motif (UHM)
kinase 1 protein.
Length = 419
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 324 MLNNMFDPATETNPSWDIEIRDDVISECNKHGGVLHVYVDKASP-QGNVYCKCPTIATAV 500
+LN + D E ++ ++ +DV EC K+G V+ + V K +P +G V+ + +
Sbjct: 325 LLNVLDDDYLENEEEYE-DVVEDVKEECQKYGPVVSLLVPKENPGRGQVFVEYANAGDSK 383
Query: 501 ASVTVCT 521
A+ + T
Sbjct: 384 AAQKLLT 390
>AJ536197-1|CAD60192.1| 419|Homo sapiens KIS protein protein.
Length = 419
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 324 MLNNMFDPATETNPSWDIEIRDDVISECNKHGGVLHVYVDKASP-QGNVYCKCPTIATAV 500
+LN + D E ++ ++ +DV EC K+G V+ + V K +P +G V+ + +
Sbjct: 325 LLNVLDDDYLENEEEYE-DVVEDVKEECQKYGPVVSLLVPKENPGRGQVFVEYANAGDSK 383
Query: 501 ASVTVCT 521
A+ + T
Sbjct: 384 AAQKLLT 390
>EF531340-1|ABP87396.1| 409|Homo sapiens abraxas protein protein.
Length = 409
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 495 PSLLSDTCSTHFPEAMLYQHTHATLHRV 412
PS+++++CSTH E LY+ HRV
Sbjct: 137 PSIITESCSTHRLEHSLYKPQKGLFHRV 164
>BC039573-1|AAH39573.1| 300|Homo sapiens CCDC98 protein protein.
Length = 300
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 495 PSLLSDTCSTHFPEAMLYQHTHATLHRV 412
PS+++++CSTH E LY+ HRV
Sbjct: 28 PSIITESCSTHRLEHSLYKPQKGLFHRV 55
>BC031682-1|AAH31682.1| 450|Homo sapiens RBM42 protein protein.
Length = 450
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKV 90
GF++F SD +AM ++NG + RP+K+
Sbjct: 395 GFVSFKDPSDYVRAMREMNGKYVGSRPIKL 424
>BC004204-1|AAH04204.1| 480|Homo sapiens hypothetical protein
MGC10433 protein.
Length = 480
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKV 90
GF++F SD +AM ++NG + RP+K+
Sbjct: 425 GFVSFKDPSDYVRAMREMNGKYVGSRPIKL 454
>BC002868-1|AAH02868.1| 451|Homo sapiens MGC10433 protein protein.
Length = 451
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKV 90
GF++F SD +AM ++NG + RP+K+
Sbjct: 396 GFVSFKDPSDYVRAMREMNGKYVGSRPIKL 425
>AY358576-1|AAQ88939.1| 409|Homo sapiens EGES496 protein.
Length = 409
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 495 PSLLSDTCSTHFPEAMLYQHTHATLHRV 412
PS+++++CSTH E LY+ HRV
Sbjct: 137 PSIITESCSTHRLEHSLYKPQKGLFHRV 164
>AP001660-1|BAA95545.1| 281|Homo sapiens RBM11 protein.
Length = 281
Score = 30.3 bits (65), Expect = 7.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKV 90
GF+ F H A+ LNG L GRP+ V
Sbjct: 53 GFVCFKHPESVSYAIALLNGIRLYGRPINV 82
>AK023676-1|BAB14635.1| 300|Homo sapiens protein ( Homo sapiens
cDNA FLJ13614 fis, clone PLACE1010857. ).
Length = 300
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 495 PSLLSDTCSTHFPEAMLYQHTHATLHRV 412
PS+++++CSTH E LY+ HRV
Sbjct: 28 PSIITESCSTHRLEHSLYKPQKGLFHRV 55
>AK022704-1|BAB14189.1| 300|Homo sapiens LG6) mRNA. protein.
Length = 300
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 495 PSLLSDTCSTHFPEAMLYQHTHATLHRV 412
PS+++++CSTH E LY+ HRV
Sbjct: 28 PSIITESCSTHRLEHSLYKPQKGLFHRV 55
>AC002115-1|AAB57629.1| 339|Homo sapiens F25451_2 protein.
Length = 339
Score = 30.3 bits (65), Expect = 7.2
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 1 GFLTFHHASDAKKAMEQLNGFELAGRPMKV 90
GF++F SD +AM ++NG + RP+K+
Sbjct: 284 GFVSFKDPSDYVRAMREMNGKYVGSRPIKL 313
>BC126111-1|AAI26112.1| 418|Homo sapiens RBM44 protein protein.
Length = 418
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Frame = +1
Query: 7 LTFHHASDAKKAMEQLNGFELAGR-----PMKV-GNVTERADGGSSTRFDADELDRA 159
L F SDAK A++++NG E+ G+ P+K+ G T + R ++ L+++
Sbjct: 238 LAFTKNSDAKIAVKEMNGIEINGKSVNVWPVKILGEYTSPLSSKNGNRISSNNLEKS 294
>AY279092-1|AAQ19181.1| 142|Homo sapiens chordin-related protein 2
variant VII protein.
Length = 142
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -2
Query: 260 PHSTDAAAGGICKPVPSANLNINCKRPVAPRSI-PARSNSSASNRVLDPPSARSVTFPTF 84
PH + A+ G C +++ ++C P P S+ A + + S P ++ P+
Sbjct: 55 PHQSPASTTGPCTNTERSSVPMSCSPPACPTSVSSAAAQRARSTAASQPAPNQAAQHPSR 114
Query: 83 IGRPANSKP 57
PA +KP
Sbjct: 115 CQTPA-AKP 122
>AK130316-1|BAC85324.1| 234|Homo sapiens protein ( Homo sapiens
cDNA FLJ26806 fis, clone PRS06045. ).
Length = 234
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Frame = +1
Query: 7 LTFHHASDAKKAMEQLNGFELAGR-----PMKV-GNVTERADGGSSTRFDADELDRA 159
L F SDAK A++++NG E+ G+ P+K+ G T + R ++ L+++
Sbjct: 54 LAFTKNSDAKIAVKEMNGIEINGKSVNVWPVKILGEYTSPLSSKNGNRISSNNLEKS 110
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,727,434
Number of Sequences: 237096
Number of extensions: 2363846
Number of successful extensions: 6243
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 5722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6229
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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