Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30595
         (686 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600...    30   2.0  
09_06_0043 + 20448793-20449823,20449915-20450030,20450491-204506...    29   3.5  
06_03_0723 + 23875008-23875204,23875311-23875576,23877166-238772...    28   6.0  
02_05_1196 - 34901320-34901342,34901937-34902041,34902314-349024...    28   6.0  
02_05_0101 - 25824093-25824112,25824734-25824842,25824927-258264...    28   8.0  

>01_06_0090 +
           26358051-26359157,26359582-26359701,26359968-26360099,
           26360194-26360375,26360488-26360602,26362001-26362135,
           26362261-26362395
          Length = 641

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -1

Query: 443 SNPSKLTLRHSPLSFSPDPLSGSRFRSGGRFCEARLLLGFVLATSSGLSPVSSPT 279
           +NP+ L  R  P+   P P+  + F+S      +R+ L    A S   S  +SPT
Sbjct: 193 ANPASLVQRGPPIPPPPPPVPPAAFKSKSYSASSRVSLPSTSAPSPSSSTSTSPT 247


>09_06_0043 +
           20448793-20449823,20449915-20450030,20450491-20450661,
           20450761-20450807,20451090-20451182,20451571-20451709,
           20452028-20452130,20452749-20452866
          Length = 605

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 580 PCPVNVDLFKAVKEWKAVDVAPNTHF 503
           P  VNV +++ +KEW A D+A    F
Sbjct: 490 PGAVNVQIYRLIKEWTAWDIARRAAF 515


>06_03_0723 +
           23875008-23875204,23875311-23875576,23877166-23877274,
           23877577-23878212,23878328-23878573,23878669-23878834,
           23878863-23879076,23879580-23880097,23880617-23880683,
           23882131-23882215,23882292-23882367,23882593-23882756,
           23883088-23883217,23883314-23883430,23883505-23883600,
           23883732-23884009,23886571-23886794,23886935-23887011,
           23887103-23887145,23887231-23887288,23888371-23888410,
           23888891-23889418
          Length = 1444

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -2

Query: 598 SFIPEGPCPVNVDLFKAVK-EWKAVDVAPNTH 506
           +F  +GP  VN ++ K     W+ +DVAP  H
Sbjct: 508 AFSSQGPNTVNPEILKVRNFSWRELDVAPRAH 539


>02_05_1196 -
           34901320-34901342,34901937-34902041,34902314-34902482,
           34902645-34902716,34902788-34902871,34903219-34903317,
           34903416-34903515,34903704-34903878,34903985-34904198,
           34904727-34904803,34904879-34905048,34905593-34905629,
           34905988-34906123,34906658-34906915
          Length = 572

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = +2

Query: 482 ISGSGGSEMRVWGDVDCFPFFYCFKEVYIHGTRTFRNKTVLLCHIKCMGLAPY 640
           I G   +++R W  +DC    + F  +      T +  + + C +KCM L PY
Sbjct: 51  IPGFASTQLRAWSVLDCPYSPFDFNPLDSVWLDTAKLLSAVNCWLKCMLLDPY 103


>02_05_0101 - 25824093-25824112,25824734-25824842,25824927-25826429,
            25826596-25827333,25827712-25827919,25828455-25830409,
            25830868-25830960,25831044-25831100,25831189-25831272,
            25831345-25831437,25831622-25832053,25833593-25833933,
            25834663-25835215
          Length = 2061

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 9/34 (26%), Positives = 21/34 (61%)
 Frame = -2

Query: 193  NIRHVHSNVLLDLCFSFSSVPLYFESVVKYTTAI 92
            N+ ++ +N+L+ + FSF+   + FE    + +A+
Sbjct: 1497 NVENIATNILMSVSFSFTGCIMVFEGEADFLSAV 1530


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,777,539
Number of Sequences: 37544
Number of extensions: 365449
Number of successful extensions: 821
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)