Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30587
         (575 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   5.4  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   5.4  
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    23   5.4  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    23   5.4  
AJ439061-1|CAD27770.1|   89|Anopheles gambiae hypothetical prote...    23   5.4  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.4  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    23   9.4  
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    23   9.4  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    23   9.4  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   9.4  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 11/54 (20%), Positives = 27/54 (50%)
 Frame = +2

Query: 272  LERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR 433
            LE    + +++L  +N  +  NF FG+     L ++++ +  +  ++ Y V  +
Sbjct: 3264 LEESRHILQHKLYSNNSQSLNNFKFGLHTQEILPLQFNKASSMATINEYRVCSK 3317


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 428 GRPGFNVAHRRRKTGKVGFP 487
           G+PG+ +  ++   G  GFP
Sbjct: 498 GQPGYGIPGQKGNAGMAGFP 517


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 522 EPLHRSSFVRRWGNPTFPVLRLLC 451
           E LH S FVRR G+     +  LC
Sbjct: 26  EHLHESGFVRRQGSHAKSSVHKLC 49


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 522 EPLHRSSFVRRWGNPTFPVLRLLC 451
           E LH S FVRR G+     +  LC
Sbjct: 26  EHLHESGFVRRQGSHAKSSVHKLC 49


>AJ439061-1|CAD27770.1|   89|Anopheles gambiae hypothetical protein
           protein.
          Length = 89

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 522 EPLHRSSFVRRWGNPTFPVLRLLC 451
           E LH S FVRR G+     +  LC
Sbjct: 26  EHLHESGFVRRQGSHAKSSVHKLC 49


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -1

Query: 194 CIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTDVQAKLSDMKIPHY 57
           CI S    RL   +LL  +G  +QP   ++  D  +  +   I HY
Sbjct: 207 CISSF-TLRLKPSDLLFVIGDFNQPSISWSTADPSSSPAYSSITHY 251


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 167 LLSCELLQHLGG 132
           LL+CE LQHL G
Sbjct: 223 LLACEQLQHLKG 234


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 167 LLSCELLQHLGG 132
           LL+CE LQHL G
Sbjct: 76  LLACEQLQHLKG 87


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 167 LLSCELLQHLGG 132
           LL+CE LQHL G
Sbjct: 223 LLACEQLQHLKG 234


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 215 TDTKRPHCIPSLGKYR 168
           TD +RPHCI   G  R
Sbjct: 326 TDCERPHCITGDGVRR 341


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,709
Number of Sequences: 2352
Number of extensions: 13674
Number of successful extensions: 26
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)