Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30585
(646 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 58 1e-09
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 51 2e-07
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 45 1e-05
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 40 3e-04
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 38 0.001
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 37 0.003
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 33 0.027
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 33 0.035
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 32 0.062
SPBC1198.07c |||mannan endo-1,6-alpha-mannosidase |Schizosacchar... 32 0.081
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 31 0.11
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 31 0.14
SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster... 31 0.14
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 31 0.19
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 30 0.25
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 30 0.25
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 30 0.33
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 30 0.33
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 30 0.33
SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 29 0.43
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 29 0.76
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 29 0.76
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 1.3
SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces p... 27 1.8
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 27 1.8
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 27 2.3
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 27 3.1
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 27 3.1
SPBC3B9.03 |||signal recognition particle receptor alpha subunit... 27 3.1
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 27 3.1
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 26 4.0
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 26 4.0
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 26 5.3
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 25 7.1
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 7.1
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 25 9.3
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 25 9.3
SPBC582.04c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 9.3
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 25 9.3
SPCC576.01c ||SPCPB1C11.04c|sulfonate dioxygenase |Schizosacchar... 25 9.3
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 25 9.3
SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyce... 25 9.3
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 25 9.3
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 57.6 bits (133), Expect = 1e-09
Identities = 27/76 (35%), Positives = 43/76 (56%)
Frame = +1
Query: 406 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMT 585
+ ++ R L+ L KI + +D + L+ + L+VWD HT+NKV S W+MT
Sbjct: 9 VNIQGTRVLKNKLGKIPDIDISTDGKYLLSASTNDVLLVWDLHTSNKVAFFEAPSVWIMT 68
Query: 586 CAYAPSGSYVACG*LD 633
CA++PS +A G L+
Sbjct: 69 CAFSPSTKSIAAGGLN 84
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 50.8 bits (116), Expect = 2e-07
Identities = 26/70 (37%), Positives = 33/70 (47%)
Frame = +1
Query: 427 TLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 606
TLRGH+A +Y W +DSR LV L VWD + +P V ++P G
Sbjct: 426 TLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDG 485
Query: 607 SYVACG*LDK 636
VA G DK
Sbjct: 486 QRVASGGADK 495
Score = 38.3 bits (85), Expect = 0.001
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +1
Query: 391 EPIGRIQMRTRRT--LRGHLAKIYAMHWG-SDSRNLVFGQSGCKLIVWDSHTTNKVHAIP 561
+ + R++ TR T + GH I + + S S LV G +WD T + +
Sbjct: 115 QAVFRVRAVTRCTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMK 174
Query: 562 LRSSWVMTCAYAPSGSYVACG*LD 633
++WV A+AP S +A G +D
Sbjct: 175 GHTNWVSCVAWAPDASIIATGSMD 198
Score = 30.3 bits (65), Expect = 0.25
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 385 NLEPIGRIQMRTRR-TLRGHLAKIYAMHWGSDSRNLVFGQSGCKLI-VWDSHTTNKVHAI 558
N I +++RT TL GH A I + WG +N ++ S K I +WD+ +H +
Sbjct: 249 NTVRIWNVKLRTLLFTLSGHTAPITCVRWG--GQNWIYSSSYDKTIRIWDAKDGKCLHIL 306
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 44.8 bits (101), Expect = 1e-05
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +1
Query: 409 QMRTRRTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTC 588
Q R R L GH +IY++ + D + LV G + +WD + I V T
Sbjct: 365 QKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVE-AGEQKLILHTDDGVTTV 423
Query: 589 AYAPSGSYVACG*LDK 636
++P G ++A G LDK
Sbjct: 424 MFSPDGQFIAAGSLDK 439
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 39.9 bits (89), Expect = 3e-04
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +1
Query: 358 DTSLAQATSNLEPIGRI-QMRTRRT---LRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVW 525
D SL + N + IGRI +R+ ++ L H+ +I AM W + L + + +W
Sbjct: 318 DGSLVSSGGN-DAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIW 376
Query: 526 DSHTTNKVHAIPLRSSWVMTCAYAPSG 606
D + H IP SS V Y SG
Sbjct: 377 DLRKVSLAHTIPAHSSLVSDVRYIESG 403
Score = 29.1 bits (62), Expect = 0.57
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +1
Query: 430 LRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 609
L GHLA++ + + LV +WD HT ++ S + + A P GS
Sbjct: 261 LEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGS 320
Query: 610 YVACG 624
V+ G
Sbjct: 321 LVSSG 325
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 38.3 bits (85), Expect = 0.001
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 415 RTRRTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTN 543
R +T+RGH IY++ + +S LV G S C + WD TN
Sbjct: 538 RRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDVFKTN 580
Score = 29.5 bits (63), Expect = 0.43
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = +1
Query: 424 RTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 603
R GHL+ + + + +S ++ G S +WD H + V + V A AP
Sbjct: 457 RVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPD 516
Query: 604 GSYVA 618
G +A
Sbjct: 517 GHTMA 521
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 36.7 bits (81), Expect = 0.003
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 415 RTRRTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAY 594
R+ R L GH I + W DS+ +V +IVW+ T ++ I S V +
Sbjct: 125 RSYRRLLGHDNDIQDLCWSYDSQLVVSVGLDSSIIVWNGTTFERLKRIEAHQSHVKGITF 184
Query: 595 APSGSYVA 618
P+G Y A
Sbjct: 185 DPAGKYFA 192
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 33.5 bits (73), Expect = 0.027
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = +1
Query: 415 RTRRTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAY 594
+ R GH IY++ + + R +V G +WD T + + + + V A
Sbjct: 393 KVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG-VTAIAI 451
Query: 595 APSGSYVACG*LDK 636
+P+ ++A G LD+
Sbjct: 452 SPNDQFIAVGSLDQ 465
Score = 28.7 bits (61), Expect = 0.76
Identities = 14/62 (22%), Positives = 25/62 (40%)
Frame = +1
Query: 430 LRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 609
L GH +Y++ + DS L+ G + VW+ T V ++ + Y
Sbjct: 480 LEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTD 539
Query: 610 YV 615
+V
Sbjct: 540 FV 541
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 33.1 bits (72), Expect = 0.035
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +1
Query: 430 LRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 609
L GH+ + + W D R L+ +I+WD+ T K+ S V C + P G
Sbjct: 251 LIGHIDTVAYIRWSPDDRYLLSCSCDKSVILWDAFTGEKLRDYKHGFS-VSCCCWLPDGL 309
Query: 610 YVACG*LDKHL 642
G D H+
Sbjct: 310 SFITGSPDCHI 320
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 32.3 bits (70), Expect = 0.062
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 421 RRTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWD 528
++ L GH + + W +D L+ G +LIVWD
Sbjct: 38 QKELTGHTGCVNTLDWSADGEFLLSGSDDTRLIVWD 73
>SPBC1198.07c |||mannan endo-1,6-alpha-mannosidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 507
Score = 31.9 bits (69), Expect = 0.081
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 87 NITTLKQGYFTSFYHGTIHH*LFIHPQ 7
N TT+ + YF++F+ G IH LF +P+
Sbjct: 31 NNTTISKPYFSTFFEGGIHSLLFFYPK 57
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 31.5 bits (68), Expect = 0.11
Identities = 17/77 (22%), Positives = 32/77 (41%)
Frame = +1
Query: 406 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMT 585
+ R TL GH I + W + S+ L + +WD V + +++V +
Sbjct: 84 LTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSS 143
Query: 586 CAYAPSGSYVACG*LDK 636
+ P G+ + G D+
Sbjct: 144 IDFNPLGTLLVSGSWDE 160
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 31.1 bits (67), Expect = 0.14
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +1
Query: 427 TLRGHLAKIYAMHWGSDSRNLVF--GQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 600
+ RGH I A+ +G V G ++ +WD +++ + SS + + P
Sbjct: 140 SFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEP 199
Query: 601 SGSYVACG*LDK 636
+GS++ G DK
Sbjct: 200 TGSFLLSGSRDK 211
Score = 29.1 bits (62), Expect = 0.57
Identities = 15/62 (24%), Positives = 26/62 (41%)
Frame = +1
Query: 430 LRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 609
LRGH ++A + SR L G + +W+ T V + + ++ Y G+
Sbjct: 503 LRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGT 562
Query: 610 YV 615
V
Sbjct: 563 QV 564
Score = 27.9 bits (59), Expect = 1.3
Identities = 15/66 (22%), Positives = 26/66 (39%)
Frame = +1
Query: 427 TLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 606
T++ H + A+ D R + + +WDS T V + V C++ P
Sbjct: 460 TIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFS 519
Query: 607 SYVACG 624
+A G
Sbjct: 520 RQLASG 525
>SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 480
Score = 31.1 bits (67), Expect = 0.14
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +2
Query: 431 CAVISRRSTPCTGAAIPGTWCSASQDVS*SCGTATRPTRCTRSR 562
C RR CTG+ IPG C A Q C +T R R +
Sbjct: 16 CDRCRRRKIRCTGSDIPGQPCLACQKAHADCHFSTTSWRACRKK 59
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 30.7 bits (66), Expect = 0.19
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 424 RTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTN 543
R L GHLA+I + + DS L G K+ +WD + +
Sbjct: 92 RRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWDCRSNS 131
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 30.3 bits (65), Expect = 0.25
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +1
Query: 430 LRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 609
LRGHLA + ++ + S + +V S L WD T + + I + Y +G
Sbjct: 343 LRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQY--NGK 400
Query: 610 YVACG 624
++ G
Sbjct: 401 FIVSG 405
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 30.3 bits (65), Expect = 0.25
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = -3
Query: 362 VSHAAFLASLIAFLRVSASWRRLSSSFM--INTRVTHSHVEQTI 237
++HA L+S++ +L+VS RR+++ + IN R+T S V +
Sbjct: 1120 INHADILSSILDYLQVSKDKRRMATHILGQINQRLTLSQVRNQL 1163
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 29.9 bits (64), Expect = 0.33
Identities = 11/62 (17%), Positives = 30/62 (48%)
Frame = +1
Query: 439 HLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVA 618
H ++ ++ D + + F ++ VWD+ + K+ + + + + Y+P+G ++
Sbjct: 102 HPSECWSSCISPDGQTIAFTSVDGRIAVWDNPSDCKISELDTKGKFGLCIDYSPNGRFIV 161
Query: 619 CG 624
G
Sbjct: 162 SG 163
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 29.9 bits (64), Expect = 0.33
Identities = 20/70 (28%), Positives = 26/70 (37%)
Frame = +1
Query: 424 RTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 603
R GHL+ +YA+ LV VWD T VH + S V + A
Sbjct: 241 RHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQEF 300
Query: 604 GSYVACG*LD 633
V G +D
Sbjct: 301 DPQVVTGSMD 310
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 29.9 bits (64), Expect = 0.33
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1
Query: 427 TLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTT 540
TL+GH +++ + W SD L G + + +WD+ ++
Sbjct: 299 TLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS 336
>SPAC23H3.05c |swd1||COMPASS complex subunit
Swd1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 29.5 bits (63), Expect = 0.43
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 424 RTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPL 564
R L GH I ++ W S R L+ K I+WD + V+ + L
Sbjct: 60 RVLTGHTRAIQSVCWSSCDRFLLTASRDWKCILWDLRDGSIVYQVVL 106
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 28.7 bits (61), Expect = 0.76
Identities = 13/59 (22%), Positives = 25/59 (42%)
Frame = +1
Query: 424 RTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 600
R L H ++ + W S+ L G + L+VWD +++ + V ++P
Sbjct: 368 RVLTAHRQEVCGLEWNSNENLLASGGNDNALMVWDKFEEKPLYSFHNHIAAVKAITWSP 426
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 28.7 bits (61), Expect = 0.76
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = +1
Query: 361 TSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTT 540
T+LA L + + + + R ++IY + W DS L+ G L ++D+HT
Sbjct: 102 TTLADDAEELA-LAKEYWKVKIVCRSMGSEIYDLCWSVDSNFLIAGAMDNSLRLYDAHTG 160
Query: 541 NKVHAIPLRSSWVMTCAYAPSGSYV 615
+ S +V + P Y+
Sbjct: 161 QLLTQKFDHSHYVQGVCWDPLNQYI 185
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.9 bits (59), Expect = 1.3
Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +1
Query: 430 LRGHLAKIYAMHWGSDSRNLVF--GQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 603
L GH ++ W + + G+ G + +VW+ T + + P +W ++ PS
Sbjct: 256 LTGHQKAALSLSWCPEDPTFLLSSGKDG-RAMVWNVETGESLGSFPRSGNWYTKSSWCPS 314
Query: 604 GS 609
S
Sbjct: 315 NS 316
>SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/71 (18%), Positives = 32/71 (45%)
Frame = +1
Query: 430 LRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 609
++ H + + + + D+R+L G + +WD +I + T +++
Sbjct: 190 IKAHNSNCFCIEFSPDNRHLAIGGADAITSLWDPQELICERSITRMDYPIRTLSFSYDSR 249
Query: 610 YVACG*LDKHL 642
Y+A G D+++
Sbjct: 250 YLASGSEDRYV 260
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 27.5 bits (58), Expect = 1.8
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Frame = +1
Query: 343 RKAACDTS---LAQATSNLEPIGRIQMRTR----RTLRGHLAKIYAMHW--GSDSRNLVF 495
R +ACD+ +A N + I +R TLRGH + A+ W GS S+
Sbjct: 275 RLSACDSDVNLMATFHHNSSDVQMIDIRVPGTAYATLRGHKGDVNAVKWMPGSKSKLATC 334
Query: 496 GQSGCKLIVWD 528
G C + +WD
Sbjct: 335 GDD-CVVSLWD 344
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/57 (21%), Positives = 24/57 (42%)
Frame = +1
Query: 430 LRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 600
++ H +I + W L G + L VWD ++ +H ++ V ++P
Sbjct: 245 MKVHEQEICGLQWDRSLGQLASGGNDNNLFVWDYRSSRPLHKFEEHTAAVKAIGWSP 301
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -2
Query: 228 APRTYNTQRTDPSVSNVPS 172
+P Y+ RT+P+V+N+PS
Sbjct: 393 SPEGYDNNRTNPTVNNLPS 411
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/16 (62%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
Frame = +1
Query: 580 MTC-AYAPSGSYVACG 624
+TC AY+P G Y+ACG
Sbjct: 482 ITCLAYSPDGKYLACG 497
>SPBC3B9.03 |||signal recognition particle receptor alpha subunit
Srp101|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +1
Query: 349 AACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLV 492
AACDT + A +E +G + ++ ++L+G +++A +G DS +V
Sbjct: 376 AACDTFRSGA---IEQLG-VHVKNLQSLKGSSIELFAQGYGKDSSFVV 419
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +1
Query: 430 LRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 609
L GH I A+ W D + G ++ +W S T + ++ ++ P G
Sbjct: 100 LTGHKDSIVAIDWSFDGTYIATGGMDSQVRLWKSSTGFEFITAFETVDEIVWLSWHPKGL 159
Query: 610 YVACG 624
++A G
Sbjct: 160 FLAAG 164
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 26.2 bits (55), Expect = 4.0
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +1
Query: 424 RTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPL 564
R+ GH A I ++ + DS +L G + +WD + + ++ IP+
Sbjct: 530 RSFIGHTAPISSLQF--DSNHLYSGSYDNSVRIWDLRSGSPINIIPM 574
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 26.2 bits (55), Expect = 4.0
Identities = 12/61 (19%), Positives = 25/61 (40%)
Frame = +1
Query: 427 TLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 606
+L+ H A + + + ++ G + WD +T + + S + Y PSG
Sbjct: 227 SLKKHTAPVSCLALHGSEKKVLSGSWDKMVYYWDLNTGDAISTYNCESGQISNIVYRPSG 286
Query: 607 S 609
+
Sbjct: 287 A 287
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 25.8 bits (54), Expect = 5.3
Identities = 15/61 (24%), Positives = 24/61 (39%)
Frame = +1
Query: 421 RRTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 600
R TLRGH + ++ D ++ G + +W T +H V + A A
Sbjct: 385 RITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALAD 444
Query: 601 S 603
S
Sbjct: 445 S 445
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +1
Query: 427 TLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWD 528
TL GH + + M + L G +IVWD
Sbjct: 99 TLNGHKSAVTTMDFDKMGTRLASGSMDTDIIVWD 132
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 25.4 bits (53), Expect = 7.1
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 252 RGTDDRQPAPRTYN-TQRTDPSVSNVPSIDAPAIFG 148
R DD Q A + N T PS++NVP+ +APA G
Sbjct: 404 RARDDSQQAYISANMTTGEMPSMTNVPAGNAPAAPG 439
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 430 LRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHT 537
LRGH +IY++ + + + G + VWD T
Sbjct: 543 LRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLST 578
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 25.0 bits (52), Expect = 9.3
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +1
Query: 430 LRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKV 549
L G I + W DSR + S L+ WD+ + K+
Sbjct: 89 LNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAVSGQKI 128
>SPBC582.04c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 601
Score = 25.0 bits (52), Expect = 9.3
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -3
Query: 155 FSGDFYITIKIG*PLFGTFCIFSISPH*NK-DISQVFITEQSTISF 21
FSG ++ +K+G PLF + + N +I+Q F+ Q+ +F
Sbjct: 308 FSGTVFMRVKVGIPLFERLKVGTNKVKNNSVNIAQSFLEPQTRSTF 353
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 427 TLRGHLAKIYAMHWG-SDSRNLVFGQSGCKLIVWD 528
TL GH ++Y + W D L + ++ +WD
Sbjct: 320 TLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWD 354
>SPCC576.01c ||SPCPB1C11.04c|sulfonate dioxygenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 413
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 118 NHFLAHFVSFQYHHTKTRIFHKF-LSRNNPP 29
N + H ++ Y +TRIFH+ L+ ++PP
Sbjct: 372 NRGVTHCITGAYRDDQTRIFHQCNLAASHPP 402
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/68 (16%), Positives = 29/68 (42%)
Frame = +1
Query: 421 RRTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 600
+R L H ++ A+ + ++ ++ +W+ +T V + + + CA+
Sbjct: 7 QRKLLSHTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRACAFIA 66
Query: 601 SGSYVACG 624
++ CG
Sbjct: 67 RKNWFVCG 74
>SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 818
Score = 25.0 bits (52), Expect = 9.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 356 HAAFLASLIAFLRVSASWRRLSSSFMINTRV 264
H +S+IAF++ + WR L SS I V
Sbjct: 663 HDESSSSMIAFVKPNPVWRNLGSSLHIEKLV 693
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 25.0 bits (52), Expect = 9.3
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 451 IYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCA-YAPSGSYVACG 624
I + W D R L+ G S + +W+ T N I + + CA ++ G ++ G
Sbjct: 84 INVVRWTPDGRRLLTGSSTGEFTLWNGLTFN-FELINQSHDYAVRCAEWSTDGRWLISG 141
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,547,874
Number of Sequences: 5004
Number of extensions: 50084
Number of successful extensions: 217
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 289756512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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