Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30585
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical pr... 202 2e-52
X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein. 202 2e-52
AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeri... 202 2e-52
Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical pr... 105 3e-23
AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeri... 105 3e-23
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 49 3e-06
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 33 0.13
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 33 0.13
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 33 0.13
Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z92782-12|CAH60765.1| 328|Caenorhabditis elegans Hypothetical p... 30 1.6
U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family ... 29 2.1
U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family p... 29 2.1
AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like p... 29 2.1
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin... 28 4.9
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 28 6.5
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 28 6.5
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 28 6.5
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 28 6.5
Z97628-3|CAB10727.1| 819|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z79755-13|CAB02114.1| 819|Caenorhabditis elegans Hypothetical p... 27 8.6
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 27 8.6
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 27 8.6
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 27 8.6
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 24 8.8
U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 24 9.3
>Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical
protein F13D12.7 protein.
Length = 340
Score = 202 bits (492), Expect = 2e-52
Identities = 96/118 (81%), Positives = 103/118 (87%)
Frame = +1
Query: 280 MNELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYA 459
M+ELD LRQEAE LK+ IR+ARK+A DT+LA SNLEPIGRIQMRTRRTLRGHLAKIYA
Sbjct: 1 MSELDQLRQEAEQLKSQIREARKSANDTTLATVASNLEPIGRIQMRTRRTLRGHLAKIYA 60
Query: 460 MHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACG*LD 633
MHW SDSRNLV KLIVWDS+TTNKVHAIPLRSSWVMTCAYAPSGS+VACG LD
Sbjct: 61 MHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLD 118
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/63 (23%), Positives = 23/63 (36%)
Frame = +1
Query: 436 GHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 615
GH + ++ D R + G +WD P S + A+ PSG+
Sbjct: 182 GHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAF 241
Query: 616 ACG 624
A G
Sbjct: 242 ATG 244
>X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein.
Length = 340
Score = 202 bits (492), Expect = 2e-52
Identities = 96/118 (81%), Positives = 103/118 (87%)
Frame = +1
Query: 280 MNELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYA 459
M+ELD LRQEAE LK+ IR+ARK+A DT+LA SNLEPIGRIQMRTRRTLRGHLAKIYA
Sbjct: 1 MSELDQLRQEAEQLKSQIREARKSANDTTLATVASNLEPIGRIQMRTRRTLRGHLAKIYA 60
Query: 460 MHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACG*LD 633
MHW SDSRNLV KLIVWDS+TTNKVHAIPLRSSWVMTCAYAPSGS+VACG LD
Sbjct: 61 MHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLD 118
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/63 (23%), Positives = 23/63 (36%)
Frame = +1
Query: 436 GHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 615
GH + ++ D R + G +WD P S + A+ PSG+
Sbjct: 182 GHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNRF 241
Query: 616 ACG 624
A G
Sbjct: 242 ATG 244
>AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeric G
protein beta subunit1 protein.
Length = 340
Score = 202 bits (492), Expect = 2e-52
Identities = 96/118 (81%), Positives = 103/118 (87%)
Frame = +1
Query: 280 MNELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYA 459
M+ELD LRQEAE LK+ IR+ARK+A DT+LA SNLEPIGRIQMRTRRTLRGHLAKIYA
Sbjct: 1 MSELDQLRQEAEQLKSQIREARKSANDTTLATVASNLEPIGRIQMRTRRTLRGHLAKIYA 60
Query: 460 MHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACG*LD 633
MHW SDSRNLV KLIVWDS+TTNKVHAIPLRSSWVMTCAYAPSGS+VACG LD
Sbjct: 61 MHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLD 118
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/63 (23%), Positives = 23/63 (36%)
Frame = +1
Query: 436 GHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 615
GH + ++ D R + G +WD P S + A+ PSG+
Sbjct: 182 GHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAF 241
Query: 616 ACG 624
A G
Sbjct: 242 ATG 244
>Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical
protein F52A8.2 protein.
Length = 356
Score = 105 bits (252), Expect = 3e-23
Identities = 46/115 (40%), Positives = 68/115 (59%)
Frame = +1
Query: 289 LDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAMHW 468
L+ L EAE L+ + R D + QA L+ +G + ++ RR L+GH+ K+ M W
Sbjct: 17 LEQLANEAEELRKKLDQERHKLNDIPIQQAAERLDVMGALGVKQRRILKGHVGKVLCMDW 76
Query: 469 GSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACG*LD 633
D R++V K+IVWD TTNK HA+ + ++WVM CA++PS +ACG LD
Sbjct: 77 SLDKRHIVSSSQDGKVIVWDGFTTNKEHALTMPTTWVMACAFSPSSQMIACGGLD 131
>AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeric G
protein beta subunit2 protein.
Length = 356
Score = 105 bits (252), Expect = 3e-23
Identities = 46/115 (40%), Positives = 68/115 (59%)
Frame = +1
Query: 289 LDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAMHW 468
L+ L EAE L+ + R D + QA L+ +G + ++ RR L+GH+ K+ M W
Sbjct: 17 LEQLANEAEELRKKLDQERHKLNDIPIQQAAERLDVMGALGVKQRRILKGHVGKVLCMDW 76
Query: 469 GSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACG*LD 633
D R++V K+IVWD TTNK HA+ + ++WVM CA++PS +ACG LD
Sbjct: 77 SLDKRHIVSSSQDGKVIVWDGFTTNKEHALTMPTTWVMACAFSPSSQMIACGGLD 131
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +1
Query: 427 TLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 606
+LRGH+ +Y + W +DSR LV G + L V++ T + + +P V T ++P G
Sbjct: 397 SLRGHVGPVYQVAWSADSRLLVSGSADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEG 456
Query: 607 SYVACG*LDKHL 642
+ V G DK L
Sbjct: 457 TKVVSGGKDKVL 468
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/68 (23%), Positives = 29/68 (42%)
Frame = +1
Query: 415 RTRRTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAY 594
R ++ GH + + + D R L G + +WD +H SWV+ A+
Sbjct: 96 RCSASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAW 155
Query: 595 APSGSYVA 618
+P + +A
Sbjct: 156 SPDATKIA 163
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 397 IGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLI-VWDSHTTNKVHAIPLRSS 573
I R+ +TL GH I W SDS+ L+ S KL+ V+D + V + ++
Sbjct: 133 IWRMDFVYEKTLMGHRLGINEFSWSSDSK-LIVSCSDDKLVKVFDVSSGRCVKTLKGHTN 191
Query: 574 WVMTCAYAPSGSYVACG*LDK 636
+V C + PSG+ +A G D+
Sbjct: 192 YVFCCCFNPSGTLIASGSFDE 212
Score = 30.7 bits (66), Expect = 0.92
Identities = 16/73 (21%), Positives = 31/73 (42%)
Frame = +1
Query: 415 RTRRTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAY 594
R +TL+GH ++ + + G + +W + N + +IP V + +
Sbjct: 181 RCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIWCARNGNTIFSIPGHEDPVSSVCF 240
Query: 595 APSGSYVACG*LD 633
G+Y+A G D
Sbjct: 241 NRDGAYLASGSYD 253
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +1
Query: 412 MRTRRTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCA 591
M RTL GH + + W SDSR +V L +++ T+ + +++V C
Sbjct: 119 MICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCN 178
Query: 592 YAPSGSYVACG*LDK 636
+ P S V G D+
Sbjct: 179 FNPQSSLVVSGSFDE 193
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +1
Query: 406 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMT 585
+ R +TL+GH ++ ++ S +V G + +WD T + +P S V
Sbjct: 159 VTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSA 218
Query: 586 CAYAPSGSYVACG*LD 633
++ GS +A G D
Sbjct: 219 VSFNRDGSLIASGSYD 234
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 37.1 bits (82), Expect = 0.011
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +1
Query: 358 DTSLAQATSNLEPIGRI-QMRTRRT---LRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVW 525
D S+A T + GR+ MRT R L GH +I+++ W + ++ G S + VW
Sbjct: 349 DGSVA-LTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVW 407
Query: 526 DSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACG*LD 633
D + +P +S V +G Y+ D
Sbjct: 408 DLRMRRNTYTMPAHTSVVTRVRADAAGQYLVSASFD 443
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +1
Query: 409 QMRTRRTLRGHLAKIYAMHWGSDSRNLVFGQSGC--KLIVWDSHTTNKVHAIPLRSSWVM 582
+++ + +GH + + + W + VFG G KL++WD T+ H I S+ V
Sbjct: 211 ELQAKDVFKGHESVVEDVAWHV-LHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVN 269
Query: 583 TCAYAPSGSYV-ACG*LDK 636
A+ P ++ A G DK
Sbjct: 270 CLAFNPYSEFILATGSADK 288
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +1
Query: 409 QMRTRRTLRGHLAKIYAMHWGSDSRNLVFGQSGC--KLIVWDSHTTNKVHAIPLRSSWVM 582
+++ + +GH + + + W + VFG G KL++WD T+ H I S+ V
Sbjct: 211 ELQAKDVFKGHESVVEDVAWHV-LHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVN 269
Query: 583 TCAYAPSGSYV-ACG*LDK 636
A+ P ++ A G DK
Sbjct: 270 CLAFNPYSEFILATGSADK 288
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +1
Query: 409 QMRTRRTLRGHLAKIYAMHWGSDSRNLVFGQSGC--KLIVWDSHTTNKVHAIPLRSSWVM 582
+++ + +GH + + + W + VFG G KL++WD T+ H I S+ V
Sbjct: 211 ELQAKDVFKGHESVVEDVAWHV-LHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVN 269
Query: 583 TCAYAPSGSYV-ACG*LDK 636
A+ P ++ A G DK
Sbjct: 270 CLAFNPYSEFILATGSADK 288
>Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical
protein ZK1307.6 protein.
Length = 702
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = +1
Query: 424 RTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 600
R L H ++ + W D + L G + +L+VW+ + ++ V A++P
Sbjct: 516 RKLTNHRQEVCGLKWSPDKQLLASGGNDNQLLVWNLRRNEPIQTYTQHNAAVKALAWSP 574
>Z92782-12|CAH60765.1| 328|Caenorhabditis elegans Hypothetical
protein F14F8.13 protein.
Length = 328
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/46 (23%), Positives = 30/46 (65%)
Frame = -3
Query: 182 MSLRSTLQRFSGDFYITIKIG*PLFGTFCIFSISPH*NKDISQVFI 45
++++S++ ++ F + I + +FGT C+ S++ + N+++S+ I
Sbjct: 142 LNIQSSVHKYLPHFTLCIILKDAVFGTACVLSLAKYLNEEVSEFCI 187
>U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family
protein 2, isoform c protein.
Length = 975
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 401 VAYRCAPDEPCAVISRRSTPCTGAAIPGTWCSASQDVS*SC--GTATRPTRCTRSRC 565
+A+ C P++ V S + PC + GTW S S SC GT R C R C
Sbjct: 791 LAFDC-PEKNIEVRSCDNGPCNAIGVWGTWGGWS-TCSTSCGPGTLVRQRTCNREPC 845
>U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family
protein 2, isoform a protein.
Length = 1020
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 401 VAYRCAPDEPCAVISRRSTPCTGAAIPGTWCSASQDVS*SC--GTATRPTRCTRSRC 565
+A+ C P++ V S + PC + GTW S S SC GT R C R C
Sbjct: 791 LAFDC-PEKNIEVRSCDNGPCNAIGVWGTWGGWS-TCSTSCGPGTLVRQRTCNREPC 845
>AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like
protease protein.
Length = 1020
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 401 VAYRCAPDEPCAVISRRSTPCTGAAIPGTWCSASQDVS*SC--GTATRPTRCTRSRC 565
+A+ C P++ V S + PC + GTW S S SC GT R C R C
Sbjct: 791 LAFDC-PEKNIEVRSCDNGPCNAIGVWGTWGGWS-TCSTSCGPGTLVRQRTCNREPC 845
>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
related protein 2 protein.
Length = 1335
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = +1
Query: 442 LAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVA 618
+ K + + S S+ + FG +V + T K H++P + + A++ G Y+A
Sbjct: 1204 IVKFNMVAYCSTSKRVAFGGKNGTCVVHELRAT-KTHSLPSHNGPIAAVAFSEDGKYLA 1261
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +1
Query: 427 TLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 606
TL GH A + + + D +V G + +W++HT + + ++ V + +
Sbjct: 371 TLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESER 428
Query: 607 SYVACG*LD 633
S V G LD
Sbjct: 429 SIVCSGSLD 437
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +1
Query: 427 TLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 606
TL GH A + + + D +V G + +W++HT + + ++ V + +
Sbjct: 373 TLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESER 430
Query: 607 SYVACG*LD 633
S V G LD
Sbjct: 431 SIVCSGSLD 439
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = +1
Query: 424 RTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 603
R L GH + + + D+R ++ G S + VWD T + + V+ +A +
Sbjct: 256 RILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA-N 312
Query: 604 GSYVAC 621
G V C
Sbjct: 313 GIMVTC 318
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = +1
Query: 424 RTLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 603
R L GH + + + D+R ++ G S + VWD T + + V+ +A +
Sbjct: 256 RILSGHTGSVLCLQY--DNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA-N 312
Query: 604 GSYVAC 621
G V C
Sbjct: 313 GIMVTC 318
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +1
Query: 427 TLRGHLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 606
TL GH A + + + D +V G + +W++HT + + ++ V + +
Sbjct: 373 TLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESER 430
Query: 607 SYVACG*LD 633
S V G LD
Sbjct: 431 SIVCSGSLD 439
>Z97628-3|CAB10727.1| 819|Caenorhabditis elegans Hypothetical
protein F43G9.12 protein.
Length = 819
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 264 HTQPRGTDDRQPAPRTYNTQRTDPSVSNVPSI 169
H + TDD +P P++ N Q+ V V S+
Sbjct: 485 HEEGLSTDDEEPTPQSMNDQKICDEVEAVASV 516
>Z79755-13|CAB02114.1| 819|Caenorhabditis elegans Hypothetical
protein F43G9.12 protein.
Length = 819
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 264 HTQPRGTDDRQPAPRTYNTQRTDPSVSNVPSI 169
H + TDD +P P++ N Q+ V V S+
Sbjct: 485 HEEGLSTDDEEPTPQSMNDQKICDEVEAVASV 516
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 502 SGCKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACG 624
S +L+VW+ + + V S + T Y+P GS +A G
Sbjct: 338 STAQLVVWEWQSESYVMKQQAHSLRITTAEYSPDGSLMATG 378
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 439 HLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMT 585
H AK+ + W D+ L G +IVW+ + + H I ++ + M+
Sbjct: 535 HTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSD-HPIIIKGAHAMS 582
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 439 HLAKIYAMHWGSDSRNLVFGQSGCKLIVWDSHTTNKVHAIPLRSSWVMT 585
H AK+ + W D+ L G +IVW+ + + H I ++ + M+
Sbjct: 535 HTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSD-HPIIIKGAHAMS 582
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 23.8 bits (49), Expect(2) = 8.8
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +1
Query: 577 VMTCAYAPSGSYVACG*LDKHLL 645
V+T ++P+G Y+A G +D ++
Sbjct: 424 VLTVEWSPNGKYLASGSIDYRII 446
Score = 21.8 bits (44), Expect(2) = 8.8
Identities = 6/21 (28%), Positives = 9/21 (42%)
Frame = +1
Query: 466 WGSDSRNLVFGQSGCKLIVWD 528
W D + FG + VW+
Sbjct: 370 WSPDGKRFAFGSDDSSVSVWE 390
>U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical
protein K10D2.1b protein.
Length = 669
Score = 23.8 bits (49), Expect(2) = 9.3
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +1
Query: 577 VMTCAYAPSGSYVACG*LDKHLL 645
V+T ++P+G Y+A G +D ++
Sbjct: 136 VLTVEWSPNGKYLASGSIDYRII 158
Score = 21.8 bits (44), Expect(2) = 9.3
Identities = 6/21 (28%), Positives = 9/21 (42%)
Frame = +1
Query: 466 WGSDSRNLVFGQSGCKLIVWD 528
W D + FG + VW+
Sbjct: 82 WSPDGKRFAFGSDDSSVSVWE 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,634,141
Number of Sequences: 27780
Number of extensions: 306533
Number of successful extensions: 909
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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