Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30584
         (661 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   3.4  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   3.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   3.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   3.4  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   4.5  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    21   7.9  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   7.9  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    21   7.9  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    21   7.9  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2

Query: 183 FGHSSWLFWRSRPKVLLHNHAGHRTDL 103
           FG S+W +   R    LH  A  + DL
Sbjct: 168 FGGSAWSWREERQAYYLHQFAPEQPDL 194


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 239 VRRGGRYPIRP 271
           +RR  RYP+RP
Sbjct: 117 IRRNSRYPLRP 127


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 322 SHDVVKRRPVNCNTTHYRANWVPAP 248
           S +  K++P +C+T  YR   V  P
Sbjct: 560 SDECNKKQPSDCDTLEYRNGEVTTP 584


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2

Query: 183 FGHSSWLFWRSRPKVLLHNHAGHRTDL 103
           FG S+W +   R    LH  A  + DL
Sbjct: 168 FGGSAWSWREERQAYYLHQFAPEQPDL 194


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 286 NTTHYRANWVPAPPPNL 236
           ++ H+ A ++PA PP L
Sbjct: 4   DSIHWEARYLPAGPPRL 20


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +2

Query: 353 ALQHIPLSPAGVIAKRPAPIALPNSC 430
           AL   P  P G   K  AP+ L  +C
Sbjct: 55  ALGEAPCDPVGRRLKSLAPLVLRGAC 80


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 627 ESTFFNSGLLFQTGTTLNPI 568
           E  +  SG L+   TT+NPI
Sbjct: 307 EWLYILSGCLYYFSTTINPI 326


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 167 GCSGDPDQK 141
           GCSG+PD K
Sbjct: 18  GCSGNPDAK 26


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +2

Query: 353 ALQHIPLSPAGVIAKRPAPIALPNSC 430
           AL   P  P G   K  AP+ L  +C
Sbjct: 55  ALGEAPCDPVGRRLKSLAPLVLRGAC 80


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,460
Number of Sequences: 438
Number of extensions: 4855
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)