Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30581
(617 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 24 1.0
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 24 1.0
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 24 1.0
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 24 1.0
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 24 1.0
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 24 1.0
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 23 2.4
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 7.3
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 7.3
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 21 9.6
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 9.6
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 1.0
Identities = 8/43 (18%), Positives = 23/43 (53%)
Frame = +1
Query: 487 HYQRQRSFSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESY 615
HY R+RS S++ + +Y +++++ ++ + + + Y
Sbjct: 230 HYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSCKRY 272
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 1.0
Identities = 8/43 (18%), Positives = 23/43 (53%)
Frame = +1
Query: 487 HYQRQRSFSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESY 615
HY R+RS S++ + +Y +++++ ++ + + + Y
Sbjct: 230 HYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSCKRY 272
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 1.0
Identities = 8/43 (18%), Positives = 23/43 (53%)
Frame = +1
Query: 487 HYQRQRSFSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESY 615
HY R+RS S++ + +Y +++++ ++ + + + Y
Sbjct: 230 HYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSCKRY 272
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 1.0
Identities = 8/43 (18%), Positives = 23/43 (53%)
Frame = +1
Query: 487 HYQRQRSFSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESY 615
HY R+RS S++ + +Y +++++ ++ + + + Y
Sbjct: 230 HYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSCKRY 272
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 24.2 bits (50), Expect = 1.0
Identities = 8/43 (18%), Positives = 23/43 (53%)
Frame = +1
Query: 487 HYQRQRSFSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESY 615
HY R+RS S++ + +Y +++++ ++ + + + Y
Sbjct: 219 HYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSCKRY 261
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 24.2 bits (50), Expect = 1.0
Identities = 8/43 (18%), Positives = 23/43 (53%)
Frame = +1
Query: 487 HYQRQRSFSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESY 615
HY R+RS S++ + +Y +++++ ++ + + + Y
Sbjct: 230 HYSRERSCSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRY 272
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 273 TLITNPEYSSKYLR 314
T I N YSSKY+R
Sbjct: 199 TYIVNTNYSSKYMR 212
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.4 bits (43), Expect = 7.3
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 427 QRYPQRFRYREVHQQGEQDHHYQRQRSFSKEE 522
++YP + +H HH QRQ F+ E+
Sbjct: 445 KKYPFELE-KALHNVMFIQHHIQRQDEFNAED 475
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3
Query: 390 PRGAGGIPVS 361
PRG GG+P S
Sbjct: 399 PRGPGGVPTS 408
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 21.0 bits (42), Expect = 9.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 449 AIEKSTNKENKITITNDKGRSPRK 520
A E+ NK+ K D G +PRK
Sbjct: 205 ASEEHGNKKKKNKEDEDDGATPRK 228
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/42 (16%), Positives = 23/42 (54%)
Frame = +1
Query: 448 RYREVHQQGEQDHHYQRQRSFSKEEIERMVNEAEKYRNEDDK 573
R REVH G+Q+ ++ + + ++ ++ + ++ + + +
Sbjct: 1425 REREVHNGGQQEDRDRKTLTSAPQQPQQQQQQQQQQQQQQQQ 1466
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,312
Number of Sequences: 438
Number of extensions: 2985
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -