Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30576
         (673 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0582 - 4752576-4752786,4752955-4753037,4753324-4753530,475...    29   2.6  
03_01_0104 - 830884-831282,831511-832205,832368-833387,833570-83...    29   3.4  
05_03_0176 + 9240573-9241043                                           28   5.9  
03_05_0195 - 21822418-21822441,21822480-21822659,21823337-218234...    28   5.9  
02_02_0549 + 11410129-11412180                                         28   7.8  
01_05_0429 + 22070636-22070662,22071490-22071577,22071908-220721...    28   7.8  

>12_01_0582 -
           4752576-4752786,4752955-4753037,4753324-4753530,
           4755128-4755207,4756853-4756998,4757088-4757719
          Length = 452

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +2

Query: 296 GLHGMR--EEHCGWRDAGQGP*LRRGPRSHVGV 388
           G HG+R  E+H G+ D  +G  +R  PRSH  +
Sbjct: 41  GYHGIRAIEDHRGYPDIHEGLVMRVAPRSHTAM 73


>03_01_0104 -
           830884-831282,831511-832205,832368-833387,833570-833696,
           834342-834709,834780-835059,835137-835466
          Length = 1072

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 206 ARTHRRTRIPRSTSAVRAPDTQGAR-GSLSEGLHGM 310
           AR  R  R P ST+A+  PD   AR GS +  LH +
Sbjct: 65  ARARRLGRFPASTAALAVPDPDAARIGSGAATLHAV 100


>05_03_0176 + 9240573-9241043
          Length = 156

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -3

Query: 233 ECVSVDVYAPIPGFEK*PSTPTETTYRDFT 144
           EC+ VDV    PGFE  P  P E     FT
Sbjct: 95  ECLHVDVPPSPPGFEAEPDEPEEEIEDPFT 124


>03_05_0195 -
           21822418-21822441,21822480-21822659,21823337-21823453,
           21824347-21824412,21825592-21825683,21825924-21825987,
           21826098-21826176,21826248-21826387,21827253-21827334,
           21827565-21827572,21828005-21828103,21828208-21828285,
           21828379-21828472,21828726-21828823,21830299-21830502
          Length = 474

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = -1

Query: 394 GADAHVTPRPTAELGTLTGVSPTTMFLTHPVKPLRE*TPRTLCIGRSDRRCRARNAC 224
           GA A VT   TA  G   GVS  T  +T  +  L E TP+++ +  +    R   +C
Sbjct: 106 GATAIVTEAATAMFGE-AGVSAATGVMTVAILLLTEITPKSVAVHNATEVARFVTSC 161


>02_02_0549 + 11410129-11412180
          Length = 683

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 1/77 (1%)
 Frame = +3

Query: 186 LLEARDRRVHIDGHAFRALHRRSER-PIHKVRGVHSRRGFTGCVRNIVVGETPVKVPNSA 362
           LL+  +  V   GHAF     R  R P  K  G  + +       + V G       +  
Sbjct: 52  LLKLTNGTVQQTGHAFYPPPVRLRRTPSTKTNGTGNEKAVRSFSSSFVFGIVTADTQDLG 111

Query: 363 VGRGVTWASAPRTNFTT 413
            G GV    APR N TT
Sbjct: 112 -GHGVVLVVAPRANLTT 127


>01_05_0429 +
           22070636-22070662,22071490-22071577,22071908-22072168,
           22072925-22073161,22073251-22073375,22074093-22074569,
           22074655-22075569
          Length = 709

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 213 HIDGHAFRALHRRSERPIHK 272
           H  GHA  A+H    RP+HK
Sbjct: 482 HEGGHALVAIHTEGARPVHK 501


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,599,480
Number of Sequences: 37544
Number of extensions: 325414
Number of successful extensions: 1075
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)