Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30576
(673 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)... 56 2e-07
U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain pro... 56 2e-07
M59832-1|AAA63215.1| 1130|Homo sapiens merosin protein. 56 2e-07
AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (meros... 56 2e-07
AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (meros... 56 2e-07
AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (meros... 56 2e-07
AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (meros... 56 2e-07
AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (meros... 56 2e-07
AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (meros... 56 2e-07
AB208922-1|BAD92159.1| 1853|Homo sapiens laminin alpha 2 subunit... 56 2e-07
BC062318-1|AAH62318.1| 559|Homo sapiens LAMA1 protein protein. 53 1e-06
BC039051-1|AAH39051.1| 747|Homo sapiens LAMA1 protein protein. 53 1e-06
Z99289-2|CAI42325.1| 1823|Homo sapiens laminin, alpha 4 protein. 34 0.40
X91171-1|CAA62596.1| 1816|Homo sapiens laminin alpha 4 protein. 34 0.40
X76939-1|CAA54258.1| 1581|Homo sapiens laminin A3 protein. 34 0.40
X70904-1|CAA50261.1| 414|Homo sapiens Laminin Ah protein. 34 0.40
S78569-1|AAB34635.1| 1816|Homo sapiens laminin alpha 4 chain pro... 34 0.40
BC066552-1|AAH66552.1| 1816|Homo sapiens LAMA4 protein protein. 34 0.40
AL590106-3|CAI12950.1| 1823|Homo sapiens laminin, alpha 4 protein. 34 0.40
AB210027-1|BAE06109.1| 1852|Homo sapiens LAMA4 variant protein p... 34 0.40
Z95636-1|CAB09137.1| 953|Homo sapiens laminin alpha 5 chain pro... 33 0.70
AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein. 33 0.70
AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain pr... 33 0.70
AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein. 33 0.70
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 31 2.8
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 31 2.8
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 31 2.8
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 31 2.8
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 2.8
BC067748-1|AAH67748.1| 264|Homo sapiens zinc finger protein 524... 31 3.8
X84900-1|CAA59325.1| 1806|Homo sapiens alpha 3B chain of laminin... 31 5.0
L34155-1|AAA59483.1| 1713|Homo sapiens epiligrin alpha 3 subunit... 31 5.0
BC014666-1|AAH14666.1| 264|Homo sapiens zinc finger protein 524... 31 5.0
BC007396-1|AAH07396.2| 260|Homo sapiens ZNF524 protein protein. 31 5.0
AY327116-1|AAQ72571.1| 3277|Homo sapiens laminin alpha 3 splice ... 31 5.0
AY327115-1|AAQ72570.1| 3333|Homo sapiens laminin alpha 3 splice ... 31 5.0
AY327114-1|AAQ72569.1| 1668|Homo sapiens laminin alpha 3 splice ... 31 5.0
AB208853-1|BAD92090.1| 1408|Homo sapiens Laminin alpha 3b chain ... 31 5.0
AB107369-1|BAD13428.1| 3333|Homo sapiens laminin alpha 3b chain ... 31 5.0
AJ316284-1|CAC87720.2| 1392|Homo sapiens neurexin 3-alpha protein. 30 6.6
AC008045-1|AAF28465.1| 154|Homo sapiens neurexin III protein. 30 6.6
AB051544-1|BAB21848.1| 1409|Homo sapiens KIAA1757 protein protein. 30 6.6
AB018286-1|BAA34463.2| 1205|Homo sapiens KIAA0743 protein protein. 30 6.6
>Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)
protein.
Length = 3110
Score = 55.6 bits (128), Expect = 2e-07
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 4 KKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDG 183
K D M +E++D +++ +V+NG G F A Y +LCDG WHK+ DG
Sbjct: 2984 KMDGMGIEMIDEKLMFHVDNGAGRFTAVYDAGVPGHLCDGQWHKVTANKIKHRIELTVDG 3043
Query: 184 H--FSKPGIGAYTSTDTHSALYIGG 252
+ ++ A TS DT+ +++GG
Sbjct: 3044 NQVEAQSPNPASTSADTNDPVFVGG 3068
>U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain protein.
Length = 3110
Score = 55.6 bits (128), Expect = 2e-07
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 4 KKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDG 183
K D M +E++D +++ +V+NG G F A Y +LCDG WHK+ DG
Sbjct: 2984 KMDGMGIEMIDEKLMFHVDNGAGRFTAVYDAGVPGHLCDGQWHKVTANKIKHRIELTVDG 3043
Query: 184 H--FSKPGIGAYTSTDTHSALYIGG 252
+ ++ A TS DT+ +++GG
Sbjct: 3044 NQVEAQSPNPASTSADTNDPVFVGG 3068
>M59832-1|AAA63215.1| 1130|Homo sapiens merosin protein.
Length = 1130
Score = 55.6 bits (128), Expect = 2e-07
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 4 KKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDG 183
K D M +E++D +++ +V+NG G F A Y +LCDG WHK+ DG
Sbjct: 1004 KMDGMGIEMIDEKLMFHVDNGAGRFTAVYDAGVPGHLCDGQWHKVTANKIKHRIELTVDG 1063
Query: 184 H--FSKPGIGAYTSTDTHSALYIGG 252
+ ++ A TS DT+ +++GG
Sbjct: 1064 NQVEAQSPNPASTSADTNDPVFVGG 1088
>AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 55.6 bits (128), Expect = 2e-07
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 4 KKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDG 183
K D M +E++D +++ +V+NG G F A Y +LCDG WHK+ DG
Sbjct: 2984 KMDGMGIEMIDEKLMFHVDNGAGRFTAVYDAGVPGHLCDGQWHKVTANKIKHRIELTVDG 3043
Query: 184 H--FSKPGIGAYTSTDTHSALYIGG 252
+ ++ A TS DT+ +++GG
Sbjct: 3044 NQVEAQSPNPASTSADTNDPVFVGG 3068
>AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 55.6 bits (128), Expect = 2e-07
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 4 KKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDG 183
K D M +E++D +++ +V+NG G F A Y +LCDG WHK+ DG
Sbjct: 2984 KMDGMGIEMIDEKLMFHVDNGAGRFTAVYDAGVPGHLCDGQWHKVTANKIKHRIELTVDG 3043
Query: 184 H--FSKPGIGAYTSTDTHSALYIGG 252
+ ++ A TS DT+ +++GG
Sbjct: 3044 NQVEAQSPNPASTSADTNDPVFVGG 3068
>AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 55.6 bits (128), Expect = 2e-07
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 4 KKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDG 183
K D M +E++D +++ +V+NG G F A Y +LCDG WHK+ DG
Sbjct: 2984 KMDGMGIEMIDEKLMFHVDNGAGRFTAVYDAGVPGHLCDGQWHKVTANKIKHRIELTVDG 3043
Query: 184 H--FSKPGIGAYTSTDTHSALYIGG 252
+ ++ A TS DT+ +++GG
Sbjct: 3044 NQVEAQSPNPASTSADTNDPVFVGG 3068
>AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 55.6 bits (128), Expect = 2e-07
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 4 KKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDG 183
K D M +E++D +++ +V+NG G F A Y +LCDG WHK+ DG
Sbjct: 2984 KMDGMGIEMIDEKLMFHVDNGAGRFTAVYDAGVPGHLCDGQWHKVTANKIKHRIELTVDG 3043
Query: 184 H--FSKPGIGAYTSTDTHSALYIGG 252
+ ++ A TS DT+ +++GG
Sbjct: 3044 NQVEAQSPNPASTSADTNDPVFVGG 3068
>AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 55.6 bits (128), Expect = 2e-07
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 4 KKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDG 183
K D M +E++D +++ +V+NG G F A Y +LCDG WHK+ DG
Sbjct: 2984 KMDGMGIEMIDEKLMFHVDNGAGRFTAVYDAGVPGHLCDGQWHKVTANKIKHRIELTVDG 3043
Query: 184 H--FSKPGIGAYTSTDTHSALYIGG 252
+ ++ A TS DT+ +++GG
Sbjct: 3044 NQVEAQSPNPASTSADTNDPVFVGG 3068
>AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 55.6 bits (128), Expect = 2e-07
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 4 KKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDG 183
K D M +E++D +++ +V+NG G F A Y +LCDG WHK+ DG
Sbjct: 2984 KMDGMGIEMIDEKLMFHVDNGAGRFTAVYDAGVPGHLCDGQWHKVTANKIKHRIELTVDG 3043
Query: 184 H--FSKPGIGAYTSTDTHSALYIGG 252
+ ++ A TS DT+ +++GG
Sbjct: 3044 NQVEAQSPNPASTSADTNDPVFVGG 3068
>AB208922-1|BAD92159.1| 1853|Homo sapiens laminin alpha 2 subunit
precursor variant protein.
Length = 1853
Score = 55.6 bits (128), Expect = 2e-07
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 4 KKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDG 183
K D M +E++D +++ +V+NG G F A Y +LCDG WHK+ DG
Sbjct: 1715 KMDGMGIEMIDEKLMFHVDNGAGRFTAVYDAGVPGHLCDGQWHKVTANKIKHRIELTVDG 1774
Query: 184 H--FSKPGIGAYTSTDTHSALYIGG 252
+ ++ A TS DT+ +++GG
Sbjct: 1775 NQVEAQSPNPASTSADTNDPVFVGG 1799
>BC062318-1|AAH62318.1| 559|Homo sapiens LAMA1 protein protein.
Length = 559
Score = 52.8 bits (121), Expect = 1e-06
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +1
Query: 4 KKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDG 183
K D + LEL+D +V+ +V NG G A Y+ LCDG WH + DG
Sbjct: 420 KVDAIGLELVDGKVLFHVNNGAGRITAAYEPKTATVLCDGKWHTLQANKSKHRITLIVDG 479
Query: 184 HF--SKPGIGAYTSTDTHSALYIGGQSA 261
+ ++ TS DT++ +Y+GG A
Sbjct: 480 NAVGAESPHTQSTSVDTNNPIYVGGYPA 507
Score = 32.3 bits (70), Expect = 1.6
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = +1
Query: 10 DYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDGHF 189
DY VL+L + + G G K+S+ L DG WH + DG
Sbjct: 246 DYAVLQLHGGRLHFMFDLGKG----RTKVSHPALLSDGKWHTVKTDYVKRKGFITVDGRE 301
Query: 190 SK--PGIGAYTSTDTHSALYIGGQSARY 267
S +G T D Y+GG ++Y
Sbjct: 302 SPMVTVVGDGTMLDVEGLFYLGGLPSQY 329
>BC039051-1|AAH39051.1| 747|Homo sapiens LAMA1 protein protein.
Length = 747
Score = 52.8 bits (121), Expect = 1e-06
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +1
Query: 4 KKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDG 183
K D + LEL+D +V+ +V NG G A Y+ LCDG WH + DG
Sbjct: 608 KVDAIGLELVDGKVLFHVNNGAGRITAAYEPKTATVLCDGKWHTLQANKSKHRITLIVDG 667
Query: 184 HF--SKPGIGAYTSTDTHSALYIGGQSA 261
+ ++ TS DT++ +Y+GG A
Sbjct: 668 NAVGAESPHTQSTSVDTNNPIYVGGYPA 695
Score = 32.3 bits (70), Expect = 1.6
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = +1
Query: 10 DYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDGHF 189
DY VL+L + + G G K+S+ L DG WH + DG
Sbjct: 434 DYAVLQLHGGRLHFMFDLGKG----RTKVSHPALLSDGKWHTVKTDYVKRKGFITVDGRE 489
Query: 190 SK--PGIGAYTSTDTHSALYIGGQSARY 267
S +G T D Y+GG ++Y
Sbjct: 490 SPMVTVVGDGTMLDVEGLFYLGGLPSQY 517
>Z99289-2|CAI42325.1| 1823|Homo sapiens laminin, alpha 4 protein.
Length = 1823
Score = 34.3 bits (75), Expect = 0.40
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 10 DYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKI 138
+Y+ + + + +V+ V NG F + ++ K LCDG WH+I
Sbjct: 1694 EYLNVHMKNGQVIVKVNNGIRDFSTS--VTPKQSLCDGRWHRI 1734
>X91171-1|CAA62596.1| 1816|Homo sapiens laminin alpha 4 protein.
Length = 1816
Score = 34.3 bits (75), Expect = 0.40
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 10 DYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKI 138
+Y+ + + + +V+ V NG F + ++ K LCDG WH+I
Sbjct: 1687 EYLNVHMKNGQVIVKVNNGIRDFSTS--VTPKQSLCDGRWHRI 1727
>X76939-1|CAA54258.1| 1581|Homo sapiens laminin A3 protein.
Length = 1581
Score = 34.3 bits (75), Expect = 0.40
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 10 DYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKI 138
+Y+ + + + +V+ V NG F + ++ K LCDG WH+I
Sbjct: 1452 EYLNVHMKNGQVIVKVNNGIRDFSTS--VTPKQSLCDGRWHRI 1492
>X70904-1|CAA50261.1| 414|Homo sapiens Laminin Ah protein.
Length = 414
Score = 34.3 bits (75), Expect = 0.40
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 10 DYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKI 138
+Y+ + + + +V+ V NG F + ++ K LCDG WH+I
Sbjct: 285 EYLNVHMKNGQVIVKVNNGIRDFSTS--VTPKQSLCDGRWHRI 325
>S78569-1|AAB34635.1| 1816|Homo sapiens laminin alpha 4 chain protein.
Length = 1816
Score = 34.3 bits (75), Expect = 0.40
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 10 DYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKI 138
+Y+ + + + +V+ V NG F + ++ K LCDG WH+I
Sbjct: 1687 EYLNVHMKNGQVIVKVNNGIRDFSTS--VTPKQSLCDGRWHRI 1727
>BC066552-1|AAH66552.1| 1816|Homo sapiens LAMA4 protein protein.
Length = 1816
Score = 34.3 bits (75), Expect = 0.40
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 10 DYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKI 138
+Y+ + + + +V+ V NG F + ++ K LCDG WH+I
Sbjct: 1687 EYLNVHMKNGQVIVKVNNGIRDFSTS--VTPKQSLCDGRWHRI 1727
>AL590106-3|CAI12950.1| 1823|Homo sapiens laminin, alpha 4 protein.
Length = 1823
Score = 34.3 bits (75), Expect = 0.40
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 10 DYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKI 138
+Y+ + + + +V+ V NG F + ++ K LCDG WH+I
Sbjct: 1694 EYLNVHMKNGQVIVKVNNGIRDFSTS--VTPKQSLCDGRWHRI 1734
>AB210027-1|BAE06109.1| 1852|Homo sapiens LAMA4 variant protein
protein.
Length = 1852
Score = 34.3 bits (75), Expect = 0.40
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 10 DYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKI 138
+Y+ + + + +V+ V NG F + ++ K LCDG WH+I
Sbjct: 1723 EYLNVHMKNGQVIVKVNNGIRDFSTS--VTPKQSLCDGRWHRI 1763
>Z95636-1|CAB09137.1| 953|Homo sapiens laminin alpha 5 chain
protein.
Length = 953
Score = 33.5 bits (73), Expect = 0.70
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 13 YMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKI 138
Y+ L++ + +V+ ++G G F + ++ LCDG WH++
Sbjct: 827 YLQLQVTEKQVLLRADDGAGEFSTS--VTRPSVLCDGQWHRL 866
>AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein.
Length = 3690
Score = 33.5 bits (73), Expect = 0.70
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 13 YMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKI 138
Y+ L++ + +V+ ++G G F + ++ LCDG WH++
Sbjct: 3564 YLQLQVTEKQVLLRADDGAGEFSTS--VTRPSVLCDGQWHRL 3603
>AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain
precursor protein.
Length = 3695
Score = 33.5 bits (73), Expect = 0.70
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 13 YMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKI 138
Y+ L++ + +V+ ++G G F + ++ LCDG WH++
Sbjct: 3569 YLQLQVTEKQVLLRADDGAGEFSTS--VTRPSVLCDGQWHRL 3608
>AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein.
Length = 1645
Score = 33.5 bits (73), Expect = 0.70
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 13 YMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKI 138
Y+ L++ + +V+ ++G G F + ++ LCDG WH++
Sbjct: 1519 YLQLQVTEKQVLLRADDGAGEFSTS--VTRPSVLCDGQWHRL 1558
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 31.5 bits (68), Expect = 2.8
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +1
Query: 334 RRRSRSLTPPWAAESRGRLPPGLTSQHSNLNQ---TRQRKRLRQS 459
RRRSRS TP SR R PP +T + S TR+R R R S
Sbjct: 1932 RRRSRSRTPTTRRRSRSRTPP-VTRRRSRSRTPPVTRRRSRSRTS 1975
Score = 30.3 bits (65), Expect = 6.6
Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +1
Query: 334 RRRSRSLTPP-WAAESRGRLPPGLTSQHSNLNQ---TRQRKRLRQS 459
RRRSRS TPP SR R PP +T + S TR+R R R S
Sbjct: 1943 RRRSRSRTPPVTRRRSRSRTPP-VTRRRSRSRTSPITRRRSRSRTS 1987
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 31.5 bits (68), Expect = 2.8
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +1
Query: 334 RRRSRSLTPPWAAESRGRLPPGLTSQHSNLNQ---TRQRKRLRQS 459
RRRSRS TP SR R PP +T + S TR+R R R S
Sbjct: 964 RRRSRSRTPTTRRRSRSRTPP-VTRRRSRSRTPPVTRRRSRSRTS 1007
Score = 30.3 bits (65), Expect = 6.6
Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +1
Query: 334 RRRSRSLTPP-WAAESRGRLPPGLTSQHSNLNQ---TRQRKRLRQS 459
RRRSRS TPP SR R PP +T + S TR+R R R S
Sbjct: 975 RRRSRSRTPPVTRRRSRSRTPP-VTRRRSRSRTSPITRRRSRSRTS 1019
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 334 RRRSRSLTPPWAAE-SRGRLPPGLTSQHSNLNQTRQRKRLRQSDHFCLRSQPK 489
RRRSRS T P SR R PP + + + RKR R +R + +
Sbjct: 1035 RRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSR 1087
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 31.5 bits (68), Expect = 2.8
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +1
Query: 334 RRRSRSLTPPWAAESRGRLPPGLTSQHSNLNQ---TRQRKRLRQS 459
RRRSRS TP SR R PP +T + S TR+R R R S
Sbjct: 1932 RRRSRSRTPTTRRRSRSRTPP-VTRRRSRSRTPPVTRRRSRSRTS 1975
Score = 30.3 bits (65), Expect = 6.6
Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +1
Query: 334 RRRSRSLTPP-WAAESRGRLPPGLTSQHSNLNQ---TRQRKRLRQS 459
RRRSRS TPP SR R PP +T + S TR+R R R S
Sbjct: 1943 RRRSRSRTPPVTRRRSRSRTPP-VTRRRSRSRTSPITRRRSRSRTS 1987
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 334 RRRSRSLTPPWAAE-SRGRLPPGLTSQHSNLNQTRQRKRLRQSDHFCLRSQPK 489
RRRSRS T P SR R PP + + + RKR R +R + +
Sbjct: 2003 RRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSR 2055
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 31.5 bits (68), Expect = 2.8
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +1
Query: 334 RRRSRSLTPPWAAESRGRLPPGLTSQHSNLNQ---TRQRKRLRQS 459
RRRSRS TP SR R PP +T + S TR+R R R S
Sbjct: 455 RRRSRSRTPTTRRRSRSRTPP-VTRRRSRSRTPPVTRRRSRSRTS 498
Score = 30.3 bits (65), Expect = 6.6
Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +1
Query: 334 RRRSRSLTPP-WAAESRGRLPPGLTSQHSNLNQ---TRQRKRLRQS 459
RRRSRS TPP SR R PP +T + S TR+R R R S
Sbjct: 466 RRRSRSRTPPVTRRRSRSRTPP-VTRRRSRSRTSPITRRRSRSRTS 510
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 334 RRRSRSLTPPWAAE-SRGRLPPGLTSQHSNLNQTRQRKRLRQSDHFCLRSQPK 489
RRRSRS T P SR R PP + + + RKR R +R + +
Sbjct: 526 RRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSR 578
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.5 bits (68), Expect = 2.8
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +1
Query: 334 RRRSRSLTPPWAAESRGRLPPGLTSQHSNLNQ---TRQRKRLRQS 459
RRRSRS TP SR R PP +T + S TR+R R R S
Sbjct: 1980 RRRSRSRTPTTRRRSRSRTPP-VTRRRSRSRTPPVTRRRSRSRTS 2023
Score = 30.3 bits (65), Expect = 6.6
Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +1
Query: 334 RRRSRSLTPP-WAAESRGRLPPGLTSQHSNLNQ---TRQRKRLRQS 459
RRRSRS TPP SR R PP +T + S TR+R R R S
Sbjct: 1991 RRRSRSRTPPVTRRRSRSRTPP-VTRRRSRSRTSPITRRRSRSRTS 2035
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 334 RRRSRSLTPPWAAE-SRGRLPPGLTSQHSNLNQTRQRKRLRQSDHFCLRSQPK 489
RRRSRS T P SR R PP + + + RKR R +R + +
Sbjct: 2051 RRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSR 2103
>BC067748-1|AAH67748.1| 264|Homo sapiens zinc finger protein 524
protein.
Length = 264
Score = 31.1 bits (67), Expect = 3.8
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 331 ERRRSRSLTPPWAAESRGRLPPGLTSQHSNLNQTRQRKRLR 453
E + +L+PP RGR P G TS + L + RKR R
Sbjct: 16 EEEKPLALSPPVPRGRRGRRPGGATSSNRTLKASLHRKRGR 56
>X84900-1|CAA59325.1| 1806|Homo sapiens alpha 3B chain of laminin-5
protein.
Length = 1806
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +1
Query: 13 YMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDGHFS 192
++ + L +V A++++G G + ++ K LCDG WH + D S
Sbjct: 1678 HLCVYLEAGKVTASMDSGAGG--TSTSVTPKQSLCDGQWHSVAVTIKQHILHLELDTDSS 1735
Query: 193 -KPGIGAYTSTDTHSALYIGGQSARYT 270
G + T L++GG A T
Sbjct: 1736 YTAGQIPFPPASTQEPLHLGGAPANLT 1762
>L34155-1|AAA59483.1| 1713|Homo sapiens epiligrin alpha 3 subunit
protein.
Length = 1713
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +1
Query: 13 YMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDGHFS 192
++ + L +V A++++G G + ++ K LCDG WH + D S
Sbjct: 1585 HLCVYLEAGKVTASMDSGAGG--TSTSVTPKQSLCDGQWHSVAVTIKQHILHLELDTDSS 1642
Query: 193 -KPGIGAYTSTDTHSALYIGGQSARYT 270
G + T L++GG A T
Sbjct: 1643 YTAGQIPFPPASTQEPLHLGGAPANLT 1669
>BC014666-1|AAH14666.1| 264|Homo sapiens zinc finger protein 524
protein.
Length = 264
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 331 ERRRSRSLTPPWAAESRGRLPPGLTSQHSNLNQTRQRKRLR 453
E + +L+PP RGR P G TS + L + RKR R
Sbjct: 16 EEEKPLALSPPVPRGRRGRRPGGATSSNRTLKASLPRKRGR 56
>BC007396-1|AAH07396.2| 260|Homo sapiens ZNF524 protein protein.
Length = 260
Score = 30.7 bits (66), Expect = 5.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 331 ERRRSRSLTPPWAAESRGRLPPGLTSQHSNLNQTRQRKRLR 453
E + +L+PP RGR P G TS + L + RKR R
Sbjct: 12 EEEKPLALSPPVPRGRRGRRPGGATSSNRTLKASLPRKRGR 52
>AY327116-1|AAQ72571.1| 3277|Homo sapiens laminin alpha 3 splice
variant b2 protein.
Length = 3277
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +1
Query: 13 YMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDGHFS 192
++ + L +V A++++G G + ++ K LCDG WH + D S
Sbjct: 3149 HLCVYLEAGKVTASMDSGAGG--TSTSVTPKQSLCDGQWHSVAVTIKQHILHLELDTDSS 3206
Query: 193 -KPGIGAYTSTDTHSALYIGGQSARYT 270
G + T L++GG A T
Sbjct: 3207 YTAGQIPFPPASTQEPLHLGGAPANLT 3233
>AY327115-1|AAQ72570.1| 3333|Homo sapiens laminin alpha 3 splice
variant b1 protein.
Length = 3333
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +1
Query: 13 YMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDGHFS 192
++ + L +V A++++G G + ++ K LCDG WH + D S
Sbjct: 3205 HLCVYLEAGKVTASMDSGAGG--TSTSVTPKQSLCDGQWHSVAVTIKQHILHLELDTDSS 3262
Query: 193 -KPGIGAYTSTDTHSALYIGGQSARYT 270
G + T L++GG A T
Sbjct: 3263 YTAGQIPFPPASTQEPLHLGGAPANLT 3289
>AY327114-1|AAQ72569.1| 1668|Homo sapiens laminin alpha 3 splice
variant a protein.
Length = 1668
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +1
Query: 13 YMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDGHFS 192
++ + L +V A++++G G + ++ K LCDG WH + D S
Sbjct: 1540 HLCVYLEAGKVTASMDSGAGG--TSTSVTPKQSLCDGQWHSVAVTIKQHILHLELDTDSS 1597
Query: 193 -KPGIGAYTSTDTHSALYIGGQSARYT 270
G + T L++GG A T
Sbjct: 1598 YTAGQIPFPPASTQEPLHLGGAPANLT 1624
>AB208853-1|BAD92090.1| 1408|Homo sapiens Laminin alpha 3b chain
variant protein.
Length = 1408
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +1
Query: 13 YMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDGHFS 192
++ + L +V A++++G G + ++ K LCDG WH + D S
Sbjct: 1280 HLCVYLEAGKVTASMDSGAGG--TSTSVTPKQSLCDGQWHSVAVTIKQHILHLELDTDSS 1337
Query: 193 -KPGIGAYTSTDTHSALYIGGQSARYT 270
G + T L++GG A T
Sbjct: 1338 YTAGQIPFPPASTQEPLHLGGAPANLT 1364
>AB107369-1|BAD13428.1| 3333|Homo sapiens laminin alpha 3b chain
protein.
Length = 3333
Score = 30.7 bits (66), Expect = 5.0
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +1
Query: 13 YMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDGHFS 192
++ + L +V A++++G G + ++ K LCDG WH + D S
Sbjct: 3205 HLCVYLEAGKVTASMDSGAGG--TSTSVTPKQSLCDGQWHSVAVTIKQHILHLELDTDSS 3262
Query: 193 -KPGIGAYTSTDTHSALYIGGQSARYT 270
G + T L++GG A T
Sbjct: 3263 YTAGQIPFPPASTQEPLHLGGAPANLT 3289
>AJ316284-1|CAC87720.2| 1392|Homo sapiens neurexin 3-alpha protein.
Length = 1392
Score = 30.3 bits (65), Expect = 6.6
Identities = 22/83 (26%), Positives = 31/83 (37%), Gaps = 2/83 (2%)
Frame = +1
Query: 10 DYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDGHF 189
DY+ L L D V + G+G F A + N + D WH + DG
Sbjct: 302 DYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKF-NDNAWHDVKVTRNLRQVTISVDGIL 360
Query: 190 SKPGIGA--YTSTDTHSALYIGG 252
+ G YT + Y+GG
Sbjct: 361 TTTGYTQEDYTMLGSDDFFYVGG 383
>AC008045-1|AAF28465.1| 154|Homo sapiens neurexin III protein.
Length = 154
Score = 30.3 bits (65), Expect = 6.6
Identities = 22/83 (26%), Positives = 31/83 (37%), Gaps = 2/83 (2%)
Frame = +1
Query: 10 DYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDGHF 189
DY+ L L D V + G+G F A + N + D WH + DG
Sbjct: 51 DYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKF-NDNAWHDVKVTRNLRQVTISVDGIL 109
Query: 190 SKPGIGA--YTSTDTHSALYIGG 252
+ G YT + Y+GG
Sbjct: 110 TTTGYTQEDYTMLGSDDFFYVGG 132
>AB051544-1|BAB21848.1| 1409|Homo sapiens KIAA1757 protein protein.
Length = 1409
Score = 30.3 bits (65), Expect = 6.6
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 201 DRRVHIDGHAFRALHRRSERPIHKVRGVHSRRGFTGCVRNIVVG-ETPVKVPNSAVGRGV 377
DR+V HAF L +R +R + +S T VG ET + P S V V
Sbjct: 479 DRKVEAIMHAFENLEKRKKRRDQPLEQSNSDVEITTTTSETPVGEETKTEAPESEVSNSV 538
Query: 378 TWASAPRT 401
+ + P T
Sbjct: 539 SNVTIPST 546
>AB018286-1|BAA34463.2| 1205|Homo sapiens KIAA0743 protein protein.
Length = 1205
Score = 30.3 bits (65), Expect = 6.6
Identities = 22/83 (26%), Positives = 31/83 (37%), Gaps = 2/83 (2%)
Frame = +1
Query: 10 DYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDGHF 189
DY+ L L D V + G+G F A + N + D WH + DG
Sbjct: 75 DYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKF-NDNAWHDVKVTRNLRQVTISVDGIL 133
Query: 190 SKPGIGA--YTSTDTHSALYIGG 252
+ G YT + Y+GG
Sbjct: 134 TTTGYTQEDYTMLGSDDFFYVGG 156
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,062,002
Number of Sequences: 237096
Number of extensions: 1657169
Number of successful extensions: 5092
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 4618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5071
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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