Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30576
(673 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 31 0.56
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 31 0.56
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 31 0.56
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 31 0.56
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 31 0.56
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr... 31 0.75
AF045640-2|AAM81123.1| 185|Caenorhabditis elegans Hypothetical ... 29 2.3
Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z29117-15|CAA82385.1| 193|Caenorhabditis elegans Hypothetical p... 29 4.0
Z29117-14|CAA82386.1| 190|Caenorhabditis elegans Hypothetical p... 29 4.0
Z22179-16|CAA80172.1| 193|Caenorhabditis elegans Hypothetical p... 29 4.0
Z22179-15|CAA80173.1| 190|Caenorhabditis elegans Hypothetical p... 29 4.0
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 28 6.9
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 31.5 bits (68), Expect = 0.56
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 7 KDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKI 138
KD+M LEL D V +V+ G+G + + SN + DG WH +
Sbjct: 2942 KDFMALELSDGGVKLSVDLGSGVGQWITESSNYN---DGKWHTV 2982
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 GKKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXD 180
G +Y+ +E ++ + VE+G+G + ++ CDG W +
Sbjct: 3530 GVLEYITVEFVNGSIKTTVESGSGGEELWHHPDIENQYCDGQWQSFKISKKRNLLTVAVN 3589
Query: 181 GH-FSKPGIGAYTSTDTHSALYIGG 252
G K A T T LY GG
Sbjct: 3590 GKAHLKILKKAKTDVLTKDPLYFGG 3614
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/54 (24%), Positives = 26/54 (48%)
Frame = +3
Query: 306 GCVRNIVVGETPVKVPNSAVGRGVTWASAPRTNFTTLKLKPDQTKKTFTTIRSF 467
GC++++ +G V + +S +GV + P + T+ D+T +F F
Sbjct: 3039 GCIKSVKLGSDNVDLESSHASKGVR-SGCPLHSVRTVSFLSDRTTASFNNATEF 3091
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 31.5 bits (68), Expect = 0.56
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 7 KDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKI 138
KD+M LEL D V +V+ G+G + + SN + DG WH +
Sbjct: 2942 KDFMALELSDGGVKLSVDLGSGVGQWITESSNYN---DGKWHTV 2982
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 GKKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXD 180
G +Y+ +E ++ + VE+G+G + ++ CDG W +
Sbjct: 3562 GVLEYITVEFVNGSIKTTVESGSGGEELWHHPDIENQYCDGQWQSFKISKKRNLLTVAVN 3621
Query: 181 GH-FSKPGIGAYTSTDTHSALYIGG 252
G K A T T LY GG
Sbjct: 3622 GKAHLKILKKAKTDVLTKDPLYFGG 3646
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/54 (24%), Positives = 26/54 (48%)
Frame = +3
Query: 306 GCVRNIVVGETPVKVPNSAVGRGVTWASAPRTNFTTLKLKPDQTKKTFTTIRSF 467
GC++++ +G V + +S +GV + P + T+ D+T +F F
Sbjct: 3039 GCIKSVKLGSDNVDLESSHASKGVR-SGCPLHSVRTVSFLSDRTTASFNNATEF 3091
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 31.5 bits (68), Expect = 0.56
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 7 KDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKI 138
KD+M LEL D V +V+ G+G + + SN + DG WH +
Sbjct: 756 KDFMALELSDGGVKLSVDLGSGVGQWITESSNYN---DGKWHTV 796
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 GKKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXD 180
G +Y+ +E ++ + VE+G+G + ++ CDG W +
Sbjct: 1376 GVLEYITVEFVNGSIKTTVESGSGGEELWHHPDIENQYCDGQWQSFKISKKRNLLTVAVN 1435
Query: 181 GH-FSKPGIGAYTSTDTHSALYIGG 252
G K A T T LY GG
Sbjct: 1436 GKAHLKILKKAKTDVLTKDPLYFGG 1460
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/54 (24%), Positives = 26/54 (48%)
Frame = +3
Query: 306 GCVRNIVVGETPVKVPNSAVGRGVTWASAPRTNFTTLKLKPDQTKKTFTTIRSF 467
GC++++ +G V + +S +GV + P + T+ D+T +F F
Sbjct: 853 GCIKSVKLGSDNVDLESSHASKGVR-SGCPLHSVRTVSFLSDRTTASFNNATEF 905
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 31.5 bits (68), Expect = 0.56
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 7 KDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKI 138
KD+M LEL D V +V+ G+G + + SN + DG WH +
Sbjct: 2942 KDFMALELSDGGVKLSVDLGSGVGQWITESSNYN---DGKWHTV 2982
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 GKKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXD 180
G +Y+ +E ++ + VE+G+G + ++ CDG W +
Sbjct: 3562 GVLEYITVEFVNGSIKTTVESGSGGEELWHHPDIENQYCDGQWQSFKISKKRNLLTVAVN 3621
Query: 181 GH-FSKPGIGAYTSTDTHSALYIGG 252
G K A T T LY GG
Sbjct: 3622 GKAHLKILKKAKTDVLTKDPLYFGG 3646
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/54 (24%), Positives = 26/54 (48%)
Frame = +3
Query: 306 GCVRNIVVGETPVKVPNSAVGRGVTWASAPRTNFTTLKLKPDQTKKTFTTIRSF 467
GC++++ +G V + +S +GV + P + T+ D+T +F F
Sbjct: 3039 GCIKSVKLGSDNVDLESSHASKGVR-SGCPLHSVRTVSFLSDRTTASFNNATEF 3091
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 31.5 bits (68), Expect = 0.56
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 7 KDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKI 138
KD+M LEL D V +V+ G+G + + SN + DG WH +
Sbjct: 2942 KDFMALELSDGGVKLSVDLGSGVGQWITESSNYN---DGKWHTV 2982
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 GKKDYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXD 180
G +Y+ +E ++ + VE+G+G + ++ CDG W +
Sbjct: 3562 GVLEYITVEFVNGSIKTTVESGSGGEELWHHPDIENQYCDGQWQSFKISKKRNLLTVAVN 3621
Query: 181 GH-FSKPGIGAYTSTDTHSALYIGG 252
G K A T T LY GG
Sbjct: 3622 GKAHLKILKKAKTDVLTKDPLYFGG 3646
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/54 (24%), Positives = 26/54 (48%)
Frame = +3
Query: 306 GCVRNIVVGETPVKVPNSAVGRGVTWASAPRTNFTTLKLKPDQTKKTFTTIRSF 467
GC++++ +G V + +S +GV + P + T+ D+T +F F
Sbjct: 3039 GCIKSVKLGSDNVDLESSHASKGVR-SGCPLHSVRTVSFLSDRTTASFNNATEF 3091
>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical
protein C29A12.4 protein.
Length = 1560
Score = 31.1 bits (67), Expect = 0.75
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Frame = +1
Query: 10 DYMVLELLDSEVVANVENGNGPFRATYKLSNKHYLCDGNWHKIHXXXXXXXXXXXXDG-- 183
DY+ EL+DS + + G+G R + + DG WH + D
Sbjct: 516 DYVAFELIDSHLFMIINLGSGVVRLQ---TTSMKVSDGEWHHVQLDRLSRTGSVIVDAIK 572
Query: 184 -HFSKPGIGAYTSTDTHSALYIG 249
FS PG+ A D ++IG
Sbjct: 573 IDFSTPGVSANLIID--DPIFIG 593
>AF045640-2|AAM81123.1| 185|Caenorhabditis elegans Hypothetical
protein C11D2.7 protein.
Length = 185
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 1 GKKDYMVLELLD--SEVVANVENGNGPFRATYKLSNKHYLCDGNWH 132
GK+ + + L+ SE + +V GNG + N HYL DG WH
Sbjct: 140 GKQHALAIGLMSMSSEEIQSVNKGNG-------IENLHYLNDGLWH 178
>Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical
protein F20B10.1 protein.
Length = 1180
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +1
Query: 91 KLSNKHYLCDGNWHKIHXXXXXXXXXXXXDGHF--SKPGIGAYTSTDTHSALYIGGQ 255
++S L DG WH++ DG G Y D HS ++IGG+
Sbjct: 195 RISAGKALDDGRWHEMRWLHQFDSVQLSIDGVLLNQTAPTGLYRKLDLHSVVHIGGR 251
>Z29117-15|CAA82385.1| 193|Caenorhabditis elegans Hypothetical
protein C48B4.12b protein.
Length = 193
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -1
Query: 394 GADAHVTPRPTAELGTLTGV---SPTTMFLTHPVKPLRE*TP 278
G D TP+PT + T T V SPTT+ +T P ++ P
Sbjct: 70 GNDGEETPKPTPKPTTTTTVKPTSPTTLKMTSPTTTTKKPAP 111
>Z29117-14|CAA82386.1| 190|Caenorhabditis elegans Hypothetical
protein C48B4.12a protein.
Length = 190
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -1
Query: 394 GADAHVTPRPTAELGTLTGV---SPTTMFLTHPVKPLRE*TP 278
G D TP+PT + T T V SPTT+ +T P ++ P
Sbjct: 67 GNDGEETPKPTPKPTTTTTVKPTSPTTLKMTSPTTTTKKPAP 108
>Z22179-16|CAA80172.1| 193|Caenorhabditis elegans Hypothetical
protein C48B4.12b protein.
Length = 193
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -1
Query: 394 GADAHVTPRPTAELGTLTGV---SPTTMFLTHPVKPLRE*TP 278
G D TP+PT + T T V SPTT+ +T P ++ P
Sbjct: 70 GNDGEETPKPTPKPTTTTTVKPTSPTTLKMTSPTTTTKKPAP 111
>Z22179-15|CAA80173.1| 190|Caenorhabditis elegans Hypothetical
protein C48B4.12a protein.
Length = 190
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -1
Query: 394 GADAHVTPRPTAELGTLTGV---SPTTMFLTHPVKPLRE*TP 278
G D TP+PT + T T V SPTT+ +T P ++ P
Sbjct: 67 GNDGEETPKPTPKPTTTTTVKPTSPTTLKMTSPTTTTKKPAP 108
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 331 ERRRSRSLTPPWAAESRGRLPPGLTSQHSNLNQTRQRKRLRQSDHFCLRSQPKQ 492
ER+RSRS +P + E R +H + ++ R+R+R R +D R + KQ
Sbjct: 18 ERKRSRSRSPRGSREHR---------EHRDRDRDRERRRERDTDREKTRDREKQ 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,131,451
Number of Sequences: 27780
Number of extensions: 260128
Number of successful extensions: 890
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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