BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30574
(758 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ974171-1|ABJ52811.1| 403|Anopheles gambiae serpin 14 protein. 26 1.1
AF080566-1|AAC31946.1| 308|Anopheles gambiae abdominal-A homeot... 25 1.9
>DQ974171-1|ABJ52811.1| 403|Anopheles gambiae serpin 14 protein.
Length = 403
Score = 26.2 bits (55), Expect = 1.1
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -1
Query: 599 VMVILFSLLVDFSIAXYVEDTVGID 525
++V +FS+ +F+ ++ DT+G+D
Sbjct: 290 IVVPVFSIKTEFNATDFLRDTIGLD 314
>AF080566-1|AAC31946.1| 308|Anopheles gambiae abdominal-A homeotic
protein protein.
Length = 308
Score = 25.4 bits (53), Expect = 1.9
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 601 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQ 699
N++ R +EE ++M NE+ K + QK+ Q
Sbjct: 204 NEQARREREEQDKMKNESLKSAQQHHSQKQAQQ 236
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,415
Number of Sequences: 2352
Number of extensions: 15302
Number of successful extensions: 48
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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