Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30572
         (616 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065600-1|BAC05828.1|  727|Homo sapiens seven transmembrane hel...    36   0.15 
BC052950-1|AAH52950.1| 1008|Homo sapiens G protein regulated ind...    34   0.35 
AL834165-1|CAD38868.1|  707|Homo sapiens hypothetical protein pr...    34   0.35 
AB067480-1|BAB67786.1|  800|Homo sapiens KIAA1893 protein protein.     34   0.35 
AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive dom...    34   0.46 
AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive dom...    34   0.46 
AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor ...    34   0.46 
BC060853-1|AAH60853.1|  190|Homo sapiens hematological and neuro...    31   4.3  
BC014438-1|AAH14438.1|  190|Homo sapiens hematological and neuro...    31   4.3  
AY598330-1|AAT06741.1|  190|Homo sapiens L11 protein.                  31   4.3  
AY323831-1|AAP72616.1|  190|Homo sapiens hematological and neuro...    31   4.3  
AL031710-2|CAM26365.1|  190|Homo sapiens chromosome 16 open read...    31   4.3  
AL031009-2|CAA19770.2|  190|Homo sapiens chromosome 16 open read...    31   4.3  
AK023154-1|BAB14434.1|  190|Homo sapiens protein ( Homo sapiens ...    31   4.3  
AE006639-3|AAK61289.1|  190|Homo sapiens HN1 like protein.             31   4.3  
AF317634-1|AAL26903.1|  616|Homo sapiens HRD1 protein.                 30   7.5  
AB085847-1|BAC24801.1|  616|Homo sapiens HRD1 protein.                 30   7.5  
AB058713-1|BAB47439.1|  579|Homo sapiens KIAA1810 protein protein.     30   7.5  
BC051307-1|AAH51307.1|  582|Homo sapiens synapsin II protein.          29   9.9  
AF077671-1|AAC28368.1|  582|Homo sapiens synapsin IIa protein.         29   9.9  

>AB065600-1|BAC05828.1|  727|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 727

 Score = 35.5 bits (78), Expect = 0.15
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = -2

Query: 144 GSSPCPWLKVLVALG--GTARRPVLGGSGSESKMLVWPPPGGRSTL 13
           GS  CPW  +L+     G    P+L  + + + MLV PP GGR++L
Sbjct: 243 GSERCPWASLLLPCSACGAVPSPLLSSASARNAMLVVPP-GGRASL 287


>BC052950-1|AAH52950.1| 1008|Homo sapiens G protein regulated
           inducer of neurite outgrowth 1 protein.
          Length = 1008

 Score = 34.3 bits (75), Expect = 0.35
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = +2

Query: 2   RLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATST--FSHGQGDEPKATNGTSVAT 175
           + SS  + P   G TN   S P  PR+   A PPSA      + G+GD P ++    +  
Sbjct: 473 KTSSEKVNPESSGKTNPVSSGPGDPRSLGTAGPPSAVKAEPATGGKGD-PLSSEKAGLVA 531

Query: 176 NGXSTPKES 202
           +G + P  S
Sbjct: 532 SGKAAPTAS 540


>AL834165-1|CAD38868.1|  707|Homo sapiens hypothetical protein
           protein.
          Length = 707

 Score = 34.3 bits (75), Expect = 0.35
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = +2

Query: 2   RLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATST--FSHGQGDEPKATNGTSVAT 175
           + SS  + P   G TN   S P  PR+   A PPSA      + G+GD P ++    +  
Sbjct: 283 KTSSEKVNPESSGKTNPVSSGPGDPRSLGTAGPPSAVKAEPATGGKGD-PLSSEKAGLVA 341

Query: 176 NGXSTPKES 202
           +G + P  S
Sbjct: 342 SGKAAPTAS 350


>AB067480-1|BAB67786.1|  800|Homo sapiens KIAA1893 protein protein.
          Length = 800

 Score = 34.3 bits (75), Expect = 0.35
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = +2

Query: 2   RLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATST--FSHGQGDEPKATNGTSVAT 175
           + SS  + P   G TN   S P  PR+   A PPSA      + G+GD P ++    +  
Sbjct: 475 KTSSEKVNPESSGKTNPVSSGPGDPRSLGTAGPPSAVKAEPATGGKGD-PLSSEKAGLVA 533

Query: 176 NGXSTPKES 202
           +G + P  S
Sbjct: 534 SGKAAPTAS 542


>AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive domain
           1A (SWI-like) protein.
          Length = 2285

 Score = 33.9 bits (74), Expect = 0.46
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = +2

Query: 5   LSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVA 172
           L++ +  PPGGG     D    PP +   A+PP A   F    G  P A    + A
Sbjct: 113 LNNNLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYG-FGQPYGRSPSAVAAAAAA 167


>AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive domain
           1A (SWI-like) protein.
          Length = 2285

 Score = 33.9 bits (74), Expect = 0.46
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = +2

Query: 5   LSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVA 172
           L++ +  PPGGG     D    PP +   A+PP A   F    G  P A    + A
Sbjct: 113 LNNNLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYG-FGQPYGRSPSAVAAAAAA 167


>AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor
           250a protein.
          Length = 2285

 Score = 33.9 bits (74), Expect = 0.46
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = +2

Query: 5   LSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVA 172
           L++ +  PPGGG     D    PP +   A+PP A   F    G  P A    + A
Sbjct: 113 LNNNLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYG-FGQPYGRSPSAVAAAAAA 167


>BC060853-1|AAH60853.1|  190|Homo sapiens hematological and
           neurological expressed 1-like protein.
          Length = 190

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +2

Query: 2   RLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPK 148
           R  SR ++PPGG  +N+F S  E   + R    P+  ++   G  +EP+
Sbjct: 11  RAGSRAMKPPGGESSNLFGSPEEATPSSR----PNRMASNIFGPTEEPQ 55


>BC014438-1|AAH14438.1|  190|Homo sapiens hematological and
           neurological expressed 1-like protein.
          Length = 190

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +2

Query: 2   RLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPK 148
           R  SR ++PPGG  +N+F S  E   + R    P+  ++   G  +EP+
Sbjct: 11  RAGSRAMKPPGGESSNLFGSPEEATPSSR----PNRMASNIFGPTEEPQ 55


>AY598330-1|AAT06741.1|  190|Homo sapiens L11 protein.
          Length = 190

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +2

Query: 2   RLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPK 148
           R  SR ++PPGG  +N+F S  E   + R    P+  ++   G  +EP+
Sbjct: 11  RAGSRAMKPPGGESSNLFGSPEEATPSSR----PNRMASNIFGPTEEPQ 55


>AY323831-1|AAP72616.1|  190|Homo sapiens hematological and
           neurological expressed gene 1-like protein-like protein
           protein.
          Length = 190

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +2

Query: 2   RLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPK 148
           R  SR ++PPGG  +N+F S  E   + R    P+  ++   G  +EP+
Sbjct: 11  RAGSRAMKPPGGESSNLFGSPEEATPSSR----PNRMASNIFGPTEEPQ 55


>AL031710-2|CAM26365.1|  190|Homo sapiens chromosome 16 open reading
           frame 34 protein.
          Length = 190

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +2

Query: 2   RLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPK 148
           R  SR ++PPGG  +N+F S  E   + R    P+  ++   G  +EP+
Sbjct: 11  RAGSRAMKPPGGESSNLFGSPEEATPSSR----PNRMASNIFGPTEEPQ 55


>AL031009-2|CAA19770.2|  190|Homo sapiens chromosome 16 open reading
           frame 34 protein.
          Length = 190

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +2

Query: 2   RLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPK 148
           R  SR ++PPGG  +N+F S  E   + R    P+  ++   G  +EP+
Sbjct: 11  RAGSRAMKPPGGESSNLFGSPEEATPSSR----PNRMASNIFGPTEEPQ 55


>AK023154-1|BAB14434.1|  190|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13092 fis, clone NT2RP3002147. ).
          Length = 190

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +2

Query: 2   RLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPK 148
           R  SR ++PPGG  +N+F S  E   + R    P+  ++   G  +EP+
Sbjct: 11  RAGSRAMKPPGGESSNLFGSPEEATPSSR----PNRMASNIFGPTEEPQ 55


>AE006639-3|AAK61289.1|  190|Homo sapiens HN1 like protein.
          Length = 190

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +2

Query: 2   RLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPK 148
           R  SR ++PPGG  +N+F S  E   + R    P+  ++   G  +EP+
Sbjct: 11  RAGSRAMKPPGGESSNLFGSPEEATPSSR----PNRMASNIFGPTEEPQ 55


>AF317634-1|AAL26903.1|  616|Homo sapiens HRD1 protein.
          Length = 616

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +2

Query: 53  FDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGXST 190
           F   P PP +G    PPS ++  S   G       GTS AT   +T
Sbjct: 391 FPPVPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTS-ATAASAT 435


>AB085847-1|BAC24801.1|  616|Homo sapiens HRD1 protein.
          Length = 616

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +2

Query: 53  FDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGXST 190
           F   P PP +G    PPS ++  S   G       GTS AT   +T
Sbjct: 391 FPPVPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTS-ATAASAT 435


>AB058713-1|BAB47439.1|  579|Homo sapiens KIAA1810 protein protein.
          Length = 579

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +2

Query: 53  FDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGXST 190
           F   P PP +G    PPS ++  S   G       GTS AT   +T
Sbjct: 354 FPPVPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTS-ATAASAT 398


>BC051307-1|AAH51307.1|  582|Homo sapiens synapsin II protein.
          Length = 582

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 252 PSRQSSPSGPGAAQGRSPQARXGPPRRV 335
           P R     GPG  QG  P  +  PPRR+
Sbjct: 450 PQRPPPQGGPGQPQGMQPPGKVLPPRRL 477


>AF077671-1|AAC28368.1|  582|Homo sapiens synapsin IIa protein.
          Length = 582

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 252 PSRQSSPSGPGAAQGRSPQARXGPPRRV 335
           P R     GPG  QG  P  +  PPRR+
Sbjct: 450 PQRPPPQGGPGQPQGMQPPGKVLPPRRL 477


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,645,034
Number of Sequences: 237096
Number of extensions: 1639324
Number of successful extensions: 6256
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6223
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)