Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30569
(461 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic ri... 101 9e-22
BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, larg... 101 9e-22
BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, larg... 101 9e-22
AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal phosph... 101 9e-22
AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1 pr... 101 9e-22
CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein. 101 1e-21
CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein. 95 1e-19
U66061-12|AAC80207.1| 247|Homo sapiens trypsinogen A protein. 29 7.8
M22612-1|AAA61231.1| 247|Homo sapiens trypsinogen protein. 29 7.8
BC128226-1|AAI28227.1| 247|Homo sapiens protease, serine, 1 (tr... 29 7.8
BC128225-1|AAI28226.1| 247|Homo sapiens PRSS3 protein protein. 29 7.8
AK128281-1|BAC87365.1| 121|Homo sapiens protein ( Homo sapiens ... 29 7.8
>M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P1 mRNA, complete cds. ).
Length = 114
Score = 101 bits (243), Expect = 9e-22
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = +3
Query: 33 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 212
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 213 TNIGSGVGAAPAAG 254
N+G+G G APAAG
Sbjct: 61 CNVGAG-GPAPAAG 73
>BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 101 bits (243), Expect = 9e-22
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = +3
Query: 33 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 212
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 213 TNIGSGVGAAPAAG 254
N+G+G G APAAG
Sbjct: 61 CNVGAG-GPAPAAG 73
>BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 101 bits (243), Expect = 9e-22
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = +3
Query: 33 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 212
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 213 TNIGSGVGAAPAAG 254
N+G+G G APAAG
Sbjct: 61 CNVGAG-GPAPAAG 73
>AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal
phosphoprotein P1 protein.
Length = 113
Score = 101 bits (243), Expect = 9e-22
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = +3
Query: 33 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 212
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 213 TNIGSGVGAAPAAG 254
N+G+G G APAAG
Sbjct: 61 CNVGAG-GPAPAAG 73
>AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1
protein.
Length = 114
Score = 101 bits (243), Expect = 9e-22
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = +3
Query: 33 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 212
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 213 TNIGSGVGAAPAAG 254
N+G+G G APAAG
Sbjct: 61 CNVGAG-GPAPAAG 73
>CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 101 bits (242), Expect = 1e-21
Identities = 46/74 (62%), Positives = 60/74 (81%)
Frame = +3
Query: 33 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 212
M S +ELAC+YSAL+L DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALVLHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 213 TNIGSGVGAAPAAG 254
N+G+G G APAAG
Sbjct: 61 CNVGAG-GPAPAAG 73
>CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 95.1 bits (226), Expect = 1e-19
Identities = 45/74 (60%), Positives = 59/74 (79%)
Frame = +3
Query: 33 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 212
M S +ELA +YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELARIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 213 TNIGSGVGAAPAAG 254
++G+G G APAAG
Sbjct: 61 CDVGAG-GPAPAAG 73
>U66061-12|AAC80207.1| 247|Homo sapiens trypsinogen A protein.
Length = 247
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -2
Query: 277 CSSSGWRSPAAGAAPTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAF 128
C SGW + A+ A P+ + + + L +K A+ PG+ S F
Sbjct: 139 CLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGF 188
>M22612-1|AAA61231.1| 247|Homo sapiens trypsinogen protein.
Length = 247
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -2
Query: 277 CSSSGWRSPAAGAAPTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAF 128
C SGW + A+ A P+ + + + L +K A+ PG+ S F
Sbjct: 139 CLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGF 188
>BC128226-1|AAI28227.1| 247|Homo sapiens protease, serine, 1
(trypsin 1) protein.
Length = 247
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -2
Query: 277 CSSSGWRSPAAGAAPTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAF 128
C SGW + A+ A P+ + + + L +K A+ PG+ S F
Sbjct: 139 CLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGF 188
>BC128225-1|AAI28226.1| 247|Homo sapiens PRSS3 protein protein.
Length = 247
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -2
Query: 277 CSSSGWRSPAAGAAPTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAF 128
C SGW + A+ A P+ + + + L +K A+ PG+ S F
Sbjct: 139 CLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGF 188
>AK128281-1|BAC87365.1| 121|Homo sapiens protein ( Homo sapiens
cDNA FLJ46418 fis, clone THYMU3012907. ).
Length = 121
Score = 29.1 bits (62), Expect = 7.8
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -3
Query: 201 GH*CLPRLWRTDLANMA--LHLQPPLSRWWKFSHQLRQHHHPPG 76
GH CLP ++ LA + +H Q L W HQ HPPG
Sbjct: 5 GHCCLPGGAKSGLAGSSAPVHRQGRLRTVWAPQHQRVAPWHPPG 48
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,328,051
Number of Sequences: 237096
Number of extensions: 1148857
Number of successful extensions: 2684
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2684
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -