Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30562
         (698 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0628 - 25643006-25643123,25643314-25643471,25643559-256436...    64   8e-11
01_05_0142 - 18564697-18564792,18564824-18564928,18565606-185656...    33   0.29 
04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,807...    29   4.7  
09_02_0062 - 3742857-3743045,3744641-3744916,3745933-3745992,374...    28   6.2  
09_04_0741 - 19852339-19852497,19853185-19853246,19853352-198534...    28   8.2  
03_01_0074 + 610948-611184,611745-611867,611983-612082,612167-61...    28   8.2  

>11_06_0628 -
           25643006-25643123,25643314-25643471,25643559-25643687,
           25644378-25644451,25644771-25644798
          Length = 168

 Score = 64.5 bits (150), Expect = 8e-11
 Identities = 35/81 (43%), Positives = 48/81 (59%)
 Frame = +3

Query: 255 KDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQFFTGESMDCDGMVAMMEYR 434
           K Y+K L AKL+    ++ E FK N+    K +LG+ K+LQFF GESM  DG +    Y+
Sbjct: 92  KRYIKNLSAKLDA---EKQEEFKKNIEGATKYLLGKLKDLQFFVGESMHDDGGLVFAYYK 148

Query: 435 DFDGTQIPIMMFFKHGLEEEK 497
             DG   P  ++F HGL+E K
Sbjct: 149 --DGATDPTFLYFSHGLKEVK 167



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 28/67 (41%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = +1

Query: 79  GRLVTRAQGDIQIEGFNPSAEEA--DEGTDSAVESGVDIVLNHRLVETYAFGDKKSYTLY 252
           G+ V +   D+ I G NPSAE    DEG D      VDIV   RL E   F DKK +  +
Sbjct: 33  GKWVVQGAIDVDI-GANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPPF-DKKQFVTF 90

Query: 253 LKTI*KN 273
           +K   KN
Sbjct: 91  MKRYIKN 97


>01_05_0142 -
           18564697-18564792,18564824-18564928,18565606-18565678,
           18566262-18567637
          Length = 549

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = -1

Query: 428 FHHGNHAITIHGLPSKEL----KFLKPAEDVFHYFVHVCFKYFNLVRRL 294
           FHH  H   ++  PSK+L    ++L+     FH F ++C++Y  + R+L
Sbjct: 245 FHHMLHLFQMYLKPSKKLVEGSQYLERGR-YFHSFANICYRYLKIGRKL 292


>04_01_0617 -
           8076624-8076971,8077761-8077883,8077965-8078035,
           8078108-8078360,8078613-8078768,8078854-8079770,
           8079858-8079927,8082310-8082416,8082722-8082755,
           8083621-8083940,8084031-8084820,8084890-8085046,
           8085647-8086068
          Length = 1255

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = +1

Query: 91  TRAQGDIQIEGFNPSAEEADEGTDSAVESGVD--IVLNHRLVETYAFGD 231
           TR+   +Q++GF PSA ++ +G+ + V S  +  IV   +L +T   G+
Sbjct: 827 TRSSDKVQLKGFVPSAPKSSQGSRTYVSSAKNRFIVPKEQLQKTSTEGN 875


>09_02_0062 -
           3742857-3743045,3744641-3744916,3745933-3745992,
           3746554-3748102,3748183-3748418
          Length = 769

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 109 IQIEGFNPSAEEADEGTDSAVESGVDIVLNHRLVETYAFGDKK 237
           + I   N S EE +E  ++A    VD+ LN   +E   +G+KK
Sbjct: 711 VSINYENASLEEVEEA-EAAARYAVDVHLNRPTLELKRYGEKK 752


>09_04_0741 -
           19852339-19852497,19853185-19853246,19853352-19853415,
           19853561-19853614,19853744-19853890,19854460-19854564,
           19854651-19854794,19854987-19855093,19855613-19855712,
           19855804-19855833,19856492-19856608,19856705-19856828,
           19857143-19857189,19857272-19857400,19857777-19857852,
           19858446-19858543,19858630-19858671,19858811-19859044
          Length = 612

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -3

Query: 453 FAYHQSLYIPSWQPC-HHNPWTPQ*RTEVP 367
           F YH  +Y+ SW  C H N ++ Q +  +P
Sbjct: 264 FLYHGRMYVSSWHICFHSNVFSKQIKVMLP 293


>03_01_0074 +
           610948-611184,611745-611867,611983-612082,612167-612213,
           612292-612450,613033-613132,613209-613300,613390-614532,
           614949-615041,615408-615493,615746-615873,615965-616086,
           616202-616270,616380-616518,616624-616686,616887-616930,
           617339-617425
          Length = 943

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -2

Query: 544 RRQFGXXXXXXXXXXXFSSSRPC-LKNIMIGICVPSKSLYSIMATMPSQSMDSP 386
           R+++G            S   P  L N M+G  +P++ L S+   +P Q++  P
Sbjct: 308 RKRYGSGPSGNQVPFDGSHEEPMPLPNPMVGFSLPNERLRSVHRNLPDQALGPP 361


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,844,308
Number of Sequences: 37544
Number of extensions: 318711
Number of successful extensions: 777
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)