Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30562
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...    66   2e-11
AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical ...    29   2.4  
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p...    28   5.6  
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p...    28   5.6  
AF025462-2|AAN72422.1| 1075|Caenorhabditis elegans Phospholipase...    28   7.4  

>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
 Frame = +1

Query: 79  GRLVTRAQGDIQIEGFNPSAEEA--DEGTDSAVESGVDIVLNHRLVETYAFGDKKSYTLY 252
           G+ V R +G+I + G NPSAEE   D+G+D  VE G+DIVLNH+LVE   + D   +  Y
Sbjct: 32  GKHVVRKEGEIVLAGSNPSAEEGAEDDGSDEHVERGIDIVLNHKLVEMNCYEDASMFKAY 91

Query: 253 LKTI*KN 273
           +K   KN
Sbjct: 92  IKKFMKN 98



 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
 Frame = +3

Query: 255 KDYMKKLVAKLEEKAPDQVEV--FKTNMNKVMKDILG--RFKELQFFTGESMDC---DGM 413
           K +MK ++  +E+   D+ +V  FK  +   +  +L   RFK L FF GE       +G 
Sbjct: 93  KKFMKNVIDHMEKNNRDKADVDAFKKKIQGWVVSLLAKDRFKNLAFFIGERAAEGAENGQ 152

Query: 414 VAMMEYRDFDGTQIPIMMFFKHGLEEEK 497
           VA++EYRD DGT++P +M  K  + EEK
Sbjct: 153 VAIIEYRDVDGTEVPTLMLVKEAIIEEK 180



 Score = 36.3 bits (80), Expect = 0.021
 Identities = 14/24 (58%), Positives = 20/24 (83%)
 Frame = +2

Query: 2  DIITGDEMFSDTYKMKLVDEVIYE 73
          DI T DE+ SD++ MKLVD+++YE
Sbjct: 6  DIFTDDELSSDSFPMKLVDDLVYE 29


>AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical
           protein F52F10.2 protein.
          Length = 508

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 338 FVHVCFKYFNLVRRLLFQFCY*FFHI 261
           F+++C +Y    RR L  FCY  F I
Sbjct: 137 FIYLCIEYLPTGRRYLMMFCYILFDI 162


>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 124  FNPSAEEADEGTDSAVESG-VDIVLNH 201
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 124  FNPSAEEADEGTDSAVESG-VDIVLNH 201
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


>AF025462-2|AAN72422.1| 1075|Caenorhabditis elegans Phospholipase c
           like protein 1,isoform a protein.
          Length = 1075

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
 Frame = -1

Query: 503 LEFLFF*TMFEKHHDWYLRTIKVSIFHHGNHAITIHGLPS--KELKFLKPAEDVFHYFVH 330
           L ++FF   F  H D++ +T++ SI  HG  A +  G  S  K + F     D     V 
Sbjct: 19  LHYIFFTLYF--HMDFFGKTLRSSIIKHGGRAKSPAGTGSGRKTVSFSSKNSDAKISNVS 76

Query: 329 VCFKY 315
            C+ Y
Sbjct: 77  DCWNY 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,883,590
Number of Sequences: 27780
Number of extensions: 293004
Number of successful extensions: 847
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)