Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30561
(596 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 173 2e-44
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 171 5e-44
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 155 5e-39
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 118 5e-28
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 108 5e-25
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 31 0.13
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 30 0.29
SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation fac... 27 1.6
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 1.6
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 2.1
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 27 2.7
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 27 2.7
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 27 2.7
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 27 2.7
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 26 3.6
SPAC144.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 4.8
SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces... 25 6.3
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 25 6.3
SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyce... 25 6.3
SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces p... 25 8.4
SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|ch... 25 8.4
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 25 8.4
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 173 bits (421), Expect = 2e-44
Identities = 81/114 (71%), Positives = 97/114 (85%)
Frame = +2
Query: 254 QVXEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENK 433
QV EGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K K
Sbjct: 439 QVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQK 498
Query: 434 ITITNDKGRLSKEEIERMVNEGREVRNEDDKQKETIQAKNALESYCFSMKSTME 595
ITITNDKGRLSKEEI+RMV+E + + ED+ + IQAKN LESY +S++++++
Sbjct: 499 ITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLD 552
Score = 71.3 bits (167), Expect = 1e-13
Identities = 41/85 (48%), Positives = 44/85 (51%)
Frame = +3
Query: 3 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 182
KE KSINPDE IL GD SE+ QD GIETAGGVMT LIKR
Sbjct: 355 KEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTPLIKR 414
Query: 183 NXXXXXXXXXXXXXYSDNQPGVLIK 257
N Y+DNQPGVLI+
Sbjct: 415 NTTIPTKKSEVFSTYADNQPGVLIQ 439
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 171 bits (417), Expect = 5e-44
Identities = 81/114 (71%), Positives = 96/114 (84%)
Frame = +2
Query: 254 QVXEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENK 433
QV EGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K K
Sbjct: 439 QVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQK 498
Query: 434 ITITNDKGRLSKEEIERMVNEGREVRNEDDKQKETIQAKNALESYCFSMKSTME 595
ITITNDKGRLSKEEI+RMV E + + ED+ + IQAKN LESY +S++++++
Sbjct: 499 ITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLD 552
Score = 72.5 bits (170), Expect = 4e-14
Identities = 41/85 (48%), Positives = 44/85 (51%)
Frame = +3
Query: 3 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 182
KE KSINPDE +L GD SE+ QD GIETAGGVMT LIKR
Sbjct: 355 KEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGIETAGGVMTPLIKR 414
Query: 183 NXXXXXXXXXXXXXYSDNQPGVLIK 257
N YSDNQPGVLI+
Sbjct: 415 NTTIPTKKSEIFSTYSDNQPGVLIQ 439
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 155 bits (376), Expect = 5e-39
Identities = 73/115 (63%), Positives = 89/115 (77%), Gaps = 1/115 (0%)
Frame = +2
Query: 254 QVXEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS-TNKEN 430
QV EGER +TKDNNLLGKF+L GIPPAPRGVPQIEVTF++DANG+L VSA++KS K
Sbjct: 468 QVYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPE 527
Query: 431 KITITNDKGRLSKEEIERMVNEGREVRNEDDKQKETIQAKNALESYCFSMKSTME 595
K+ I NDKGRLS+E+IERMV E E ED KE I+A+N LE+Y +S+K +
Sbjct: 528 KLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFD 582
Score = 41.5 bits (93), Expect = 9e-05
Identities = 28/85 (32%), Positives = 36/85 (42%)
Frame = +3
Query: 3 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 182
K+ +K INPDE +L G++ + + GIET GGVMT LI R
Sbjct: 386 KKASKGINPDEAVAYGAAVQAGVLSGEEGSD--NIVLLDVIPLTLGIETTGGVMTKLIGR 443
Query: 183 NXXXXXXXXXXXXXYSDNQPGVLIK 257
N DNQ VLI+
Sbjct: 444 NTPIPTRKSQIFSTAVDNQNTVLIQ 468
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 118 bits (285), Expect = 5e-28
Identities = 55/114 (48%), Positives = 80/114 (70%)
Frame = +2
Query: 254 QVXEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENK 433
+V +GER + +DN L+G F+LTGI PAP+G PQIEV+FD+DA+GI+NVSA +K+TNK++
Sbjct: 482 RVFQGERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSS 541
Query: 434 ITITNDKGRLSKEEIERMVNEGREVRNEDDKQKETIQAKNALESYCFSMKSTME 595
IT+ G L+ EIE MV + + R D +KE I+ N ES C ++S ++
Sbjct: 542 ITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLD 594
Score = 37.5 bits (83), Expect = 0.001
Identities = 27/85 (31%), Positives = 33/85 (38%)
Frame = +3
Query: 3 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 182
+E KS+NPDE +L G V+D GIET GGV T LI R
Sbjct: 402 REPAKSVNPDEAVAIGAAIQGGVLSG----HVKDLVLLDVTPLSLGIETLGGVFTRLINR 457
Query: 183 NXXXXXXXXXXXXXYSDNQPGVLIK 257
N +D Q V I+
Sbjct: 458 NTTIPTRKSQVFSTAADGQTAVEIR 482
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 108 bits (260), Expect = 5e-25
Identities = 50/118 (42%), Positives = 77/118 (65%)
Frame = +2
Query: 239 TRSTHQVXEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKST 418
T T V +GER +N LG+F+LTGIPP PRG ++E TF++DANGIL V+A+EK+T
Sbjct: 439 TTVTFPVYQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTT 498
Query: 419 NKENKITITNDKGRLSKEEIERMVNEGREVRNEDDKQKETIQAKNALESYCFSMKSTM 592
+ I ITN G LS +I+ M+ + + +D + ++AK+ LESY ++++T+
Sbjct: 499 GRSAHIEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTI 556
Score = 30.3 bits (65), Expect = 0.22
Identities = 22/83 (26%), Positives = 30/83 (36%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 KELNKSINPDEXXXXXXXXXXXIL-HGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIK 179
+ LNKSINPDE +L + S++ QD G+ G V +
Sbjct: 359 RALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQDLLLLDVVPLSLGVAMEGNVFGVVCP 418
Query: 180 RNXXXXXXXXXXXXXYSDNQPGV 248
RN +DNQ V
Sbjct: 419 RNTPIPTIKKRTFTTVADNQTTV 441
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 31.1 bits (67), Expect = 0.13
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 374 DANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEG--REVRNEDDKQKETIQA 547
D LNVS + S +E +T ++ R+ +EE +RM ++ + + K+ T+Q
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKRVTTVQG 117
Query: 548 KNA 556
+A
Sbjct: 118 LDA 120
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 29.9 bits (64), Expect = 0.29
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +2
Query: 410 KSTNKENKITITNDKGRLSKEEIERMVNEGREVRNEDDKQKETIQAKNALESYCFSMKST 589
K K ++++ + RL E +E+ ++ D ET+ KNALE Y + ++
Sbjct: 534 KKLVKVADLSVSVQEDRLPTEVLEKYREAEHQMIATDKLVAETVDRKNALEEYIYDTRAK 593
Query: 590 ME 595
++
Sbjct: 594 LD 595
>SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation factor
CPSF-73 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 797
Score = 27.5 bits (58), Expect = 1.6
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 467 KEEIERMVNEGREVRNEDDKQ-KETIQAKNAL 559
KEE+E+ +G + RNE+ K+ KET+ NAL
Sbjct: 684 KEEVEK--KDGDKERNEEKKEEKETLPVLNAL 713
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 382 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRDRAY 486
R P R +YRE H + + H R QGR +Y
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSY 355
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.1 bits (57), Expect = 2.1
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -3
Query: 399 ETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPS 262
E L PLA MS TSI G G GG P + + + + +SPS
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMG-IFDQSPS 120
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 2.7
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 419 NKENKITITNDKGRLSKEEIERMVNEGREVRNEDDKQKETIQAKNALESYCF 574
NK+ K T D SKEE+E +V E D +Q + K+ L++ F
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVRED----ENDSEQLDHFDMKSILKAEKF 576
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 26.6 bits (56), Expect = 2.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 452 KGRLSKEEIERMVNEGREVRNEDD 523
KG LSKEE+ER V + ++ N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 26.6 bits (56), Expect = 2.7
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 380 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEGREVRNED 520
N + N S +KS+NKE + + RLS + +G + ++ED
Sbjct: 409 NTVQNESKSQKSSNKEGRSSRGGFFSRLSFSRSSSRMKKGSKAKHED 455
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.6 bits (56), Expect = 2.7
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +2
Query: 464 SKEEIERMVNEGREVRNEDDKQKETIQAKNALESYCFSMKS 586
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 506 VRNEDDKQKETIQAKNALESYCFSMKST 589
V + + K+TI KNA++ Y S+K T
Sbjct: 252 VSSRNKPNKQTILTKNAIQDYLVSLKIT 279
>SPAC144.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 112
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 464 SKEEIERMVNEGREVRNEDDKQKE 535
S+E+I M+N+ RE + KQK+
Sbjct: 73 SEEKIHEMINQKRETKKRKRKQKK 96
>SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 693
Score = 25.4 bits (53), Expect = 6.3
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = -1
Query: 254 DEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTV 75
D+YS L + + EC+++F + D S+ N EGK ++L LL
Sbjct: 343 DQYS-LHLTMAQECMNIFEKQQLNLIGAIEQDLSTGSNVEGKVPRSVLSELLPLLDEGNA 401
Query: 74 QDSSLDSCTISYGLVR 27
++S+ + Y + R
Sbjct: 402 EESTKIRLLLLYIIYR 417
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 25.4 bits (53), Expect = 6.3
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 389 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEGREVRNED 520
L VS ++S K + + K EE+E VNE E R D
Sbjct: 257 LCVSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1210
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 473 EIERMVNEGREVRNEDDK--QKETIQAKNALESYCFS 577
+ + ++N E+RN D+ QK T+Q +A+ CFS
Sbjct: 331 KFDALLNFITEMRNVVDQLYQKSTLQPNDAVPGLCFS 367
>SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 257
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 344 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITN-DKGR 460
+P TF NG++N+S + ++ N E + DKGR
Sbjct: 122 IPVKRGTFIEFRNGMINISPVGRNANTEERNEFERFDKGR 161
>SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 509
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +2
Query: 380 NGILNVSAIEKSTNKENKITITNDKGRLSKEE 475
+GIL+ + IEK +K K+ + N+ G++S ++
Sbjct: 154 DGILSFTVIEKVDDKNLKVRV-NNNGKISSKK 184
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -3
Query: 414 DFSIAETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARS 268
+ S L IP+AS K S T G G S + P L++ + R+
Sbjct: 479 NLSRRNNLAIPIASRRKSVSAVNTLYGVGSSYTSESFPFSKLTVPVERN 527
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,091,729
Number of Sequences: 5004
Number of extensions: 37006
Number of successful extensions: 167
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 260219058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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