Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30558
         (712 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1928|AAN11883.1|  721|Drosophila melanogaster CG6199-PB...    79   4e-15
AE014296-1927|AAF50079.1|  721|Drosophila melanogaster CG6199-PA...    79   4e-15
BT003764-1|AAO41443.1|  595|Drosophila melanogaster RE30068p pro...    79   6e-15
AY070800-1|AAL48422.1|  139|Drosophila melanogaster AT18358p pro...    29   4.7  
AE014297-2591|AAF55602.2|  139|Drosophila melanogaster CG14294-P...    29   4.7  

>AE014296-1928|AAN11883.1|  721|Drosophila melanogaster CG6199-PB,
           isoform B protein.
          Length = 721

 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 39/78 (50%), Positives = 50/78 (64%)
 Frame = +2

Query: 257 PGGGQKVILLKNRLEKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKFKSFPDTRVLFSA 436
           PGGG K+ LL+  +      +  E IILFTDSYDV+    LDEI +KFK     ++LFSA
Sbjct: 73  PGGGFKLNLLREAIAPYK--NEPETIILFTDSYDVIITTTLDEIFEKFKE-SGAKILFSA 129

Query: 437 EQFCWPDAKLATQYPNIE 490
           E++CWPD  LA  YP +E
Sbjct: 130 EKYCWPDKSLANDYPEVE 147



 Score = 76.2 bits (179), Expect = 4e-14
 Identities = 34/68 (50%), Positives = 52/68 (76%)
 Frame = +1

Query: 508 DSGGFIGYLPEIYEIINSNPIKDKDDDQLYYTKIYLDKDLRESLKITLDHKSEIFQNLNG 687
           +SG FIGY P+++ ++  +PI+D  DDQLY+TKI+LD+  R  L + LD +S +FQNL+G
Sbjct: 155 NSGAFIGYAPQVFALL-VDPIEDTADDQLYFTKIFLDETKRAKLGLKLDVQSRLFQNLHG 213

Query: 688 ALSDVQLR 711
           A +DV+L+
Sbjct: 214 AKNDVKLK 221



 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 28/64 (43%), Positives = 40/64 (62%)
 Frame = +3

Query: 69  LILCVFVILFNSHTQATDEVVVLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGD 248
           L+L       ++ +   D++ V TVAT+   G  R++RSA+VY+I+V  LG GEEW GGD
Sbjct: 10  LLLLAVTSQGDAESNWNDKIKVFTVATEPTDGYTRYIRSARVYDIEVTTLGLGEEWKGGD 69

Query: 249 MNSP 260
           M  P
Sbjct: 70  MQKP 73


>AE014296-1927|AAF50079.1|  721|Drosophila melanogaster CG6199-PA,
           isoform A protein.
          Length = 721

 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 39/78 (50%), Positives = 50/78 (64%)
 Frame = +2

Query: 257 PGGGQKVILLKNRLEKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKFKSFPDTRVLFSA 436
           PGGG K+ LL+  +      +  E IILFTDSYDV+    LDEI +KFK     ++LFSA
Sbjct: 73  PGGGFKLNLLREAIAPYK--NEPETIILFTDSYDVIITTTLDEIFEKFKE-SGAKILFSA 129

Query: 437 EQFCWPDAKLATQYPNIE 490
           E++CWPD  LA  YP +E
Sbjct: 130 EKYCWPDKSLANDYPEVE 147



 Score = 76.2 bits (179), Expect = 4e-14
 Identities = 34/68 (50%), Positives = 52/68 (76%)
 Frame = +1

Query: 508 DSGGFIGYLPEIYEIINSNPIKDKDDDQLYYTKIYLDKDLRESLKITLDHKSEIFQNLNG 687
           +SG FIGY P+++ ++  +PI+D  DDQLY+TKI+LD+  R  L + LD +S +FQNL+G
Sbjct: 155 NSGAFIGYAPQVFALL-VDPIEDTADDQLYFTKIFLDETKRAKLGLKLDVQSRLFQNLHG 213

Query: 688 ALSDVQLR 711
           A +DV+L+
Sbjct: 214 AKNDVKLK 221



 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 28/64 (43%), Positives = 40/64 (62%)
 Frame = +3

Query: 69  LILCVFVILFNSHTQATDEVVVLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGD 248
           L+L       ++ +   D++ V TVAT+   G  R++RSA+VY+I+V  LG GEEW GGD
Sbjct: 10  LLLLAVTSQGDAESNWNDKIKVFTVATEPTDGYTRYIRSARVYDIEVTTLGLGEEWKGGD 69

Query: 249 MNSP 260
           M  P
Sbjct: 70  MQKP 73


>BT003764-1|AAO41443.1|  595|Drosophila melanogaster RE30068p
           protein.
          Length = 595

 Score = 79.0 bits (186), Expect = 6e-15
 Identities = 39/78 (50%), Positives = 50/78 (64%)
 Frame = +2

Query: 257 PGGGQKVILLKNRLEKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKFKSFPDTRVLFSA 436
           PGGG K+ LL+  +      +  E IILFTDSYDV+    LDEI +KFK     ++LFSA
Sbjct: 73  PGGGFKLNLLREAIAPYK--NEPETIILFTDSYDVIITTTLDEIFEKFKE-SGAKILFSA 129

Query: 437 EQFCWPDAKLATQYPNIE 490
           E++CWPD  LA  YP +E
Sbjct: 130 EKYCWPDKSLADDYPEVE 147



 Score = 76.2 bits (179), Expect = 4e-14
 Identities = 34/68 (50%), Positives = 52/68 (76%)
 Frame = +1

Query: 508 DSGGFIGYLPEIYEIINSNPIKDKDDDQLYYTKIYLDKDLRESLKITLDHKSEIFQNLNG 687
           +SG FIGY P+++ ++  +PI+D  DDQLY+TKI+LD+  R  L + LD +S +FQNL+G
Sbjct: 155 NSGAFIGYAPQVFALL-VDPIEDTADDQLYFTKIFLDETKRAKLGLKLDVQSRLFQNLHG 213

Query: 688 ALSDVQLR 711
           A +DV+L+
Sbjct: 214 AKNDVKLK 221



 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 28/64 (43%), Positives = 40/64 (62%)
 Frame = +3

Query: 69  LILCVFVILFNSHTQATDEVVVLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGD 248
           L+L       ++ +   D++ V TVAT+   G  R++RSA+VY+I+V  LG GEEW GGD
Sbjct: 10  LLLLAVTSQGDAESNWNDKIKVFTVATEPTDGYTRYIRSARVYDIEVTTLGLGEEWKGGD 69

Query: 249 MNSP 260
           M  P
Sbjct: 70  MQKP 73


>AY070800-1|AAL48422.1|  139|Drosophila melanogaster AT18358p
           protein.
          Length = 139

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 15/62 (24%), Positives = 28/62 (45%)
 Frame = +3

Query: 30  MMWFTQKMGLFIQLILCVFVILFNSHTQATDEVVVLTVATDDNHGLERFLRSAKVYNIDV 209
           M W +   G+ +  +LC   I  +   +   + V   +  DD H +    R+AK  N+D 
Sbjct: 1   MSWLSTIFGIILITLLCTIWIAAHPRWEQMAKAVASKMNYDDQHRIHTASRAAK--NVDA 58

Query: 210 EV 215
           ++
Sbjct: 59  QI 60


>AE014297-2591|AAF55602.2|  139|Drosophila melanogaster CG14294-PA
           protein.
          Length = 139

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 15/62 (24%), Positives = 28/62 (45%)
 Frame = +3

Query: 30  MMWFTQKMGLFIQLILCVFVILFNSHTQATDEVVVLTVATDDNHGLERFLRSAKVYNIDV 209
           M W +   G+ +  +LC   I  +   +   + V   +  DD H +    R+AK  N+D 
Sbjct: 1   MSWLSTIFGIILITLLCTIWIAAHPRWEQMAKAVASKMNYDDQHRIHTASRAAK--NVDA 58

Query: 210 EV 215
           ++
Sbjct: 59  QI 60


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,902,945
Number of Sequences: 53049
Number of extensions: 681428
Number of successful extensions: 2076
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2070
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)