Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30558
         (712 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66512-7|CAA91321.1|  730|Caenorhabditis elegans Hypothetical pr...    89   4e-18
U97005-9|AAK72085.1|  829|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z69663-4|CAA93508.1|  287|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U41531-4|AAR85902.1|  578|Caenorhabditis elegans Guanylyl cyclas...    29   3.3  
U41531-3|AAR85901.1|  702|Caenorhabditis elegans Guanylyl cyclas...    29   3.3  
AY275183-1|AAP32291.1|  578|Caenorhabditis elegans soluble guany...    29   3.3  
AY275182-1|AAP32290.1|  702|Caenorhabditis elegans soluble guany...    29   3.3  
Z83228-9|CAB05737.2|  539|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U67079-1|AAB40716.1|  539|Caenorhabditis elegans C2-HC type zinc...    28   5.7  
U55363-11|AAA97968.1|  299|Caenorhabditis elegans Hypothetical p...    28   5.7  
AL110485-28|CAD36500.1|  145|Caenorhabditis elegans Hypothetical...    28   7.6  
AL110485-27|CAB60369.3|  515|Caenorhabditis elegans Hypothetical...    28   7.6  

>Z66512-7|CAA91321.1|  730|Caenorhabditis elegans Hypothetical
           protein F52H3.1 protein.
          Length = 730

 Score = 88.6 bits (210), Expect = 4e-18
 Identities = 39/72 (54%), Positives = 54/72 (75%)
 Frame = +1

Query: 496 KSIFDSGGFIGYLPEIYEIINSNPIKDKDDDQLYYTKIYLDKDLRESLKITLDHKSEIFQ 675
           K   +SG F+GY PE+++I+    ++DKDDDQLYYT IYLD+ LR+ L + LD  S+IFQ
Sbjct: 149 KRFLNSGLFMGYGPEMHKILKLKSVEDKDDDQLYYTMIYLDEKLRKELNMDLDSMSKIFQ 208

Query: 676 NLNGALSDVQLR 711
           NLNG + DV+L+
Sbjct: 209 NLNGVIEDVELQ 220



 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
 Frame = +2

Query: 260 GGGQKVILLKNRLEKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKF-KSFPDTRVLFSA 436
           GGGQK+ +L + +EK    D  + +I+F D+YDV+F  +   I++KF + + + R+LF A
Sbjct: 71  GGGQKIRILSDWIEKYK--DASDTMIMFVDAYDVVFNADSTTILRKFFEHYSEKRLLFGA 128

Query: 437 EQFCWPDAKLATQYPNIEVVSPYL 508
           E FCWPD  LA +YP +E    +L
Sbjct: 129 EPFCWPDQSLAPEYPIVEFGKRFL 152



 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 28/49 (57%), Positives = 39/49 (79%), Gaps = 2/49 (4%)
 Frame = +3

Query: 108 TQATD--EVVVLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGD 248
           T  TD  E+VV+TVAT++  GL+R L SAK ++I++EVLG GE+W+GGD
Sbjct: 17  TTITDLPELVVVTVATENTDGLKRLLESAKAFDINIEVLGLGEKWNGGD 65


>U97005-9|AAK72085.1|  829|Caenorhabditis elegans Hypothetical
           protein F19F10.9 protein.
          Length = 829

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = +2

Query: 287 KNRLEKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKFKSFPDTRVLFS 433
           K +LEK     +KE+ +L T+SYD   LG LD+  KK K      ++ S
Sbjct: 771 KKQLEKRANRKDKEERMLKTNSYDTP-LGTLDKQRKKQKQLSTPYLVLS 818


>Z69663-4|CAA93508.1|  287|Caenorhabditis elegans Hypothetical
           protein K02B9.3a protein.
          Length = 287

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -3

Query: 338 VLFSLCCQLSSASQACFSEELLFVHHRGVHVTT*PLFTLAQYLDINIV 195
           + F+L  Q+       FSE   FV   GV V    L  L  YLDI++V
Sbjct: 181 LFFNLILQILITDSLIFSETPWFVCGVGVFVVNMALLELDHYLDISLV 228


>U41531-4|AAR85902.1|  578|Caenorhabditis elegans Guanylyl cyclase
           protein 31, isoformc protein.
          Length = 578

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/51 (31%), Positives = 30/51 (58%)
 Frame = +1

Query: 541 IYEIINSNPIKDKDDDQLYYTKIYLDKDLRESLKITLDHKSEIFQNLNGAL 693
           I+E+I+S+PI++ +D  L Y    +D+   E  ++  D + E F +L G +
Sbjct: 148 IFELISSDPIQEDEDGILVYKTTDVDQMTEERHRMG-DGEREKFLSLKGQM 197


>U41531-3|AAR85901.1|  702|Caenorhabditis elegans Guanylyl cyclase
           protein 31, isoformb protein.
          Length = 702

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/51 (31%), Positives = 30/51 (58%)
 Frame = +1

Query: 541 IYEIINSNPIKDKDDDQLYYTKIYLDKDLRESLKITLDHKSEIFQNLNGAL 693
           I+E+I+S+PI++ +D  L Y    +D+   E  ++  D + E F +L G +
Sbjct: 272 IFELISSDPIQEDEDGILVYKTTDVDQMTEERHRMG-DGEREKFLSLKGQM 321


>AY275183-1|AAP32291.1|  578|Caenorhabditis elegans soluble guanylyl
           cyclase GCY-31b protein.
          Length = 578

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/51 (31%), Positives = 30/51 (58%)
 Frame = +1

Query: 541 IYEIINSNPIKDKDDDQLYYTKIYLDKDLRESLKITLDHKSEIFQNLNGAL 693
           I+E+I+S+PI++ +D  L Y    +D+   E  ++  D + E F +L G +
Sbjct: 148 IFELISSDPIQEDEDGILVYKTTDVDQMTEERHRMG-DGEREKFLSLKGQM 197


>AY275182-1|AAP32290.1|  702|Caenorhabditis elegans soluble guanylyl
           cyclase GCY-31a protein.
          Length = 702

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/51 (31%), Positives = 30/51 (58%)
 Frame = +1

Query: 541 IYEIINSNPIKDKDDDQLYYTKIYLDKDLRESLKITLDHKSEIFQNLNGAL 693
           I+E+I+S+PI++ +D  L Y    +D+   E  ++  D + E F +L G +
Sbjct: 272 IFELISSDPIQEDEDGILVYKTTDVDQMTEERHRMG-DGEREKFLSLKGQM 321


>Z83228-9|CAB05737.2|  539|Caenorhabditis elegans Hypothetical
           protein F52F12.6 protein.
          Length = 539

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 313 FHQLLKPVFQKNYFLSTTGEFMSPPDHSSPLPNTSTSIL 197
           F Q + P FQK   + T+G  MS   HS   P+   S+L
Sbjct: 137 FSQFMAPSFQKQLEIFTSGNMMS-ATHSDTSPSDVDSVL 174


>U67079-1|AAB40716.1|  539|Caenorhabditis elegans C2-HC type zinc
           finger proteinC.e-MyT1 protein.
          Length = 539

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 313 FHQLLKPVFQKNYFLSTTGEFMSPPDHSSPLPNTSTSIL 197
           F Q + P FQK   + T+G  MS   HS   P+   S+L
Sbjct: 137 FSQFMAPSFQKQLEIFTSGNMMS-ATHSDTSPSDVDSVL 174


>U55363-11|AAA97968.1|  299|Caenorhabditis elegans Hypothetical
           protein ZC404.10 protein.
          Length = 299

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 36  WFTQKMGLFIQLILCVFVILFNSHTQATDEVVV 134
           W + K  L I L+LC+ V +F SH    + V +
Sbjct: 153 WQSPKYSLRIALLLCIPVFIFGSHNVLLNHVEI 185


>AL110485-28|CAD36500.1|  145|Caenorhabditis elegans Hypothetical
           protein Y46G5A.26b protein.
          Length = 145

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +3

Query: 36  WFTQKMGLFIQLILCVFVILF--NSHTQATDE 125
           W TQ    F  +I C+F  L   N HTQ TD+
Sbjct: 100 WITQMTFFFGFVIFCLFYFLVYPNIHTQITDD 131


>AL110485-27|CAB60369.3|  515|Caenorhabditis elegans Hypothetical
           protein Y46G5A.26a protein.
          Length = 515

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +3

Query: 36  WFTQKMGLFIQLILCVFVILF--NSHTQATDE 125
           W TQ    F  +I C+F  L   N HTQ TD+
Sbjct: 470 WITQMTFFFGFVIFCLFYFLVYPNIHTQITDD 501


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,630,655
Number of Sequences: 27780
Number of extensions: 359194
Number of successful extensions: 1082
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)