Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30552
         (531 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0855 + 23703827-23704019,23704465-23704481,23705051-237052...    30   1.0  
03_01_0618 + 4543013-4543111,4544100-4544177,4544739-4544873,454...    27   7.1  
01_05_0513 - 22864657-22867899                                         27   7.1  
11_08_0021 + 27716298-27716478,27717137-27717309,27717408-277175...    27   9.4  
09_02_0036 + 3217163-3217584,3217752-3218322                           27   9.4  
02_01_0401 + 2927581-2927669,2927795-2927921,2928354-2928437,292...    27   9.4  

>12_02_0855 +
           23703827-23704019,23704465-23704481,23705051-23705254,
           23705486-23705605,23705867-23706472
          Length = 379

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +1

Query: 70  DNCXLTPNPDQLDDDENKSDERGNA-CDNCPRH 165
           D+C ++   ++ D+DE + D+ G A C  C  H
Sbjct: 43  DSCAVSDEEEEEDEDEGEEDQEGAAQCSGCTAH 75


>03_01_0618 +
           4543013-4543111,4544100-4544177,4544739-4544873,
           4544971-4545078,4545397-4545525,4546191-4546306,
           4546392-4546509,4547274-4547379,4547492-4547631,
           4547735-4547905,4547984-4548094,4548206-4548317,
           4548615-4548943,4549064-4549154,4549542-4549637,
           4549710-4549780,4549868-4549980,4550353-4550434
          Length = 734

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 321 CDNCPRVRNTNQE 359
           C +CPR R+TNQE
Sbjct: 166 CSSCPRARSTNQE 178


>01_05_0513 - 22864657-22867899
          Length = 1080

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 421 PSWSRSISLSHASPTLSLSVSSW 353
           P W++  +++HA P  +L +S W
Sbjct: 385 PEWNQVFAINHAKPEPTLEISVW 407


>11_08_0021 + 27716298-27716478,27717137-27717309,27717408-27717578,
            27717967-27718077,27718168-27718245,27718642-27718832,
            27718873-27718958,27719202-27719206,27719301-27719378,
            27719465-27719527,27719597-27719680,27720049-27720209,
            27720377-27720416,27720774-27720893,27720993-27721211,
            27721927-27722100,27722202-27722883,27722986-27723185,
            27723269-27723407,27723502-27723677
          Length = 1043

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +3

Query: 255  DNCPRKYNPQQDDMDSXGVGDVCDNCPRVRNTNQEDTDKDNVGD 386
            ++C      Q+D  D  G  D+ D+     +T+++D D D+  D
Sbjct: 903  ESCIHLKEVQEDGDDGDGAEDLDDDDEEEEDTDEDDEDSDDDDD 946


>09_02_0036 + 3217163-3217584,3217752-3218322
          Length = 330

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 445 QXSKPSCIPSWSRSISLSHASPTLSL 368
           Q +K S    WSR I+L  + PTLS+
Sbjct: 63  QINKESISAGWSRFINLVQSGPTLSI 88


>02_01_0401 +
           2927581-2927669,2927795-2927921,2928354-2928437,
           2928546-2928662,2928754-2928945,2929031-2929234,
           2929322-2929809,2930429-2930528,2930686-2930745,
           2931007-2931126,2931407-2931751
          Length = 641

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = -3

Query: 439 SKPSCIPSWSRSISLSHASPTLSLSVSSWFVLRTRGQLSQTS 314
           SKP C+PS S   SLS  + T    +SS   L+  G  S  S
Sbjct: 180 SKPGCLPSTSPDHSLSTCTCTWEEHISSLRDLKFGGSESMRS 221


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.312    0.135    0.449 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,934,833
Number of Sequences: 37544
Number of extensions: 157931
Number of successful extensions: 395
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1178343540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)