SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30550
         (828 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U38904-1|AAA93261.1|  367|Homo sapiens zinc finger protein C2H2-...    34   0.72 
BC110856-1|AAI10857.1|  576|Homo sapiens ZNF211 protein protein.       34   0.72 
BC089440-1|AAH89440.1|  541|Homo sapiens ZNF211 protein protein.       34   0.72 
BC034351-1|AAH34351.1|  509|Homo sapiens ZNF211 protein protein.       34   0.72 
AB209847-1|BAD93084.1|  590|Homo sapiens zinc finger protein 211...    34   0.72 
AB209273-1|BAD92510.1|  567|Homo sapiens zinc finger protein 211...    34   0.72 
BC121029-1|AAI21030.1|  606|Homo sapiens ZNF195 protein protein.       32   2.2  
BC121028-1|AAI21029.1|  557|Homo sapiens zinc finger protein 195...    32   2.2  
AF003540-1|AAB86596.1|  629|Homo sapiens Krueppel family zinc fi...    32   2.2  
AB209664-1|BAD92901.1|  488|Homo sapiens Hypothetical protein DK...    32   2.2  

>U38904-1|AAA93261.1|  367|Homo sapiens zinc finger protein C2H2-25
           protein.
          Length = 367

 Score = 33.9 bits (74), Expect = 0.72
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -1

Query: 681 CSTWFRACRQNCDATPHRK-NLRTPTRRCNTCELILCFFSLYLLSKRIH 538
           CS   +AC + C+   H+K +       CN C     ++S +++ +R+H
Sbjct: 62  CSKCGKACTRRCNLIQHQKVHSEERPYECNECGKFFTYYSSFIIHQRVH 110


>BC110856-1|AAI10857.1|  576|Homo sapiens ZNF211 protein protein.
          Length = 576

 Score = 33.9 bits (74), Expect = 0.72
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -1

Query: 681 CSTWFRACRQNCDATPHRK-NLRTPTRRCNTCELILCFFSLYLLSKRIH 538
           CS   +AC + C+   H+K +       CN C     ++S +++ +R+H
Sbjct: 271 CSKCGKACTRRCNLIQHQKVHSEERPYECNECGKFFTYYSSFIIHQRVH 319


>BC089440-1|AAH89440.1|  541|Homo sapiens ZNF211 protein protein.
          Length = 541

 Score = 33.9 bits (74), Expect = 0.72
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -1

Query: 681 CSTWFRACRQNCDATPHRK-NLRTPTRRCNTCELILCFFSLYLLSKRIH 538
           CS   +AC + C+   H+K +       CN C     ++S +++ +R+H
Sbjct: 236 CSKCGKACTRRCNLIQHQKVHSEERPYECNECGKFFTYYSSFIIHQRVH 284


>BC034351-1|AAH34351.1|  509|Homo sapiens ZNF211 protein protein.
          Length = 509

 Score = 33.9 bits (74), Expect = 0.72
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -1

Query: 681 CSTWFRACRQNCDATPHRK-NLRTPTRRCNTCELILCFFSLYLLSKRIH 538
           CS   +AC + C+   H+K +       CN C     ++S +++ +R+H
Sbjct: 259 CSKCGKACTRRCNLIQHQKVHSEERPYECNECGKFFTYYSSFIIHQRVH 307


>AB209847-1|BAD93084.1|  590|Homo sapiens zinc finger protein 211
           isoform 2 variant protein.
          Length = 590

 Score = 33.9 bits (74), Expect = 0.72
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -1

Query: 681 CSTWFRACRQNCDATPHRK-NLRTPTRRCNTCELILCFFSLYLLSKRIH 538
           CS   +AC + C+   H+K +       CN C     ++S +++ +R+H
Sbjct: 285 CSKCGKACTRRCNLIQHQKVHSEERPYECNECGKFFTYYSSFIIHQRVH 333


>AB209273-1|BAD92510.1|  567|Homo sapiens zinc finger protein 211
           isoform 2 variant protein.
          Length = 567

 Score = 33.9 bits (74), Expect = 0.72
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -1

Query: 681 CSTWFRACRQNCDATPHRK-NLRTPTRRCNTCELILCFFSLYLLSKRIH 538
           CS   +AC + C+   H+K +       CN C     ++S +++ +R+H
Sbjct: 262 CSKCGKACTRRCNLIQHQKVHSEERPYECNECGKFFTYYSSFIIHQRVH 310


>BC121029-1|AAI21030.1|  606|Homo sapiens ZNF195 protein protein.
          Length = 606

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
 Frame = -1

Query: 708 NEGLAVAGS----CSTWFRACRQNCDATPHRKN-LRTPTRRCNTCELILCFFSLYLLSKR 544
           N+ + +AG     C TW++    + + + H++N +     +C  C+ I  +FS     KR
Sbjct: 348 NQQMILAGEKLSKCETWYKGFNHSPNPSKHQRNEIGGKPFKCEECDSIFKWFSDLTKHKR 407

Query: 543 IH 538
           IH
Sbjct: 408 IH 409


>BC121028-1|AAI21029.1|  557|Homo sapiens zinc finger protein 195
           protein.
          Length = 557

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
 Frame = -1

Query: 708 NEGLAVAGS----CSTWFRACRQNCDATPHRKN-LRTPTRRCNTCELILCFFSLYLLSKR 544
           N+ + +AG     C TW++    + + + H++N +     +C  C+ I  +FS     KR
Sbjct: 299 NQQMILAGEKLSKCETWYKGFNHSPNPSKHQRNEIGGKPFKCEECDSIFKWFSDLTKHKR 358

Query: 543 IH 538
           IH
Sbjct: 359 IH 360


>AF003540-1|AAB86596.1|  629|Homo sapiens Krueppel family zinc
           finger protein protein.
          Length = 629

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
 Frame = -1

Query: 708 NEGLAVAGS----CSTWFRACRQNCDATPHRKN-LRTPTRRCNTCELILCFFSLYLLSKR 544
           N+ + +AG     C TW++    + + + H++N +     +C  C+ I  +FS     KR
Sbjct: 371 NQQMILAGEKLSKCETWYKGFNHSPNPSKHQRNEIGGKPFKCEECDSIFKWFSDLTKHKR 430

Query: 543 IH 538
           IH
Sbjct: 431 IH 432


>AB209664-1|BAD92901.1|  488|Homo sapiens Hypothetical protein
           DKFZp666D035 variant protein.
          Length = 488

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
 Frame = -1

Query: 708 NEGLAVAGS----CSTWFRACRQNCDATPHRKN-LRTPTRRCNTCELILCFFSLYLLSKR 544
           N+ + +AG     C TW++    + + + H++N +     +C  C+ I  +FS     KR
Sbjct: 230 NQQMILAGEKLSKCETWYKGFNHSPNPSKHQRNEIGGKPFKCEECDSIFKWFSDLTKHKR 289

Query: 543 IH 538
           IH
Sbjct: 290 IH 291


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,983,535
Number of Sequences: 237096
Number of extensions: 2253320
Number of successful extensions: 4483
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4461
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -