Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30545
(584 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 147 1e-36
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 145 4e-36
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 120 2e-28
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 102 3e-23
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 93 2e-20
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 30 0.22
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.50
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 28 1.2
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 1.5
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 27 2.7
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 2.7
SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase |Schizosaccha... 27 2.7
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 26 3.5
SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces p... 25 6.2
SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces... 25 6.2
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 25 6.2
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 25 6.2
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 6.2
SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate syn... 25 6.2
SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|ch... 25 8.1
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 147 bits (356), Expect = 1e-36
Identities = 69/87 (79%), Positives = 77/87 (88%)
Frame = +3
Query: 255 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 434
LLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRLSKEE
Sbjct: 453 LLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEE 512
Query: 435 IERMVNEAEKYRNEDDKQKETIQAKMH 515
I+RMV+EAEKY+ ED+ + IQAK H
Sbjct: 513 IDRMVSEAEKYKAEDEAETSRIQAKNH 539
Score = 122 bits (294), Expect = 4e-29
Identities = 61/85 (71%), Positives = 66/85 (77%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
AYGAAVQAAIL GD SE+ QD GIETAGGVMT LIKRNTTIPTK+++ F
Sbjct: 368 AYGAAVQAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSEVFS 427
Query: 181 TYSDNQPGVLIQVFEGERAMTKDNN 255
TY+DNQPGVLIQVFEGERA TKD N
Sbjct: 428 TYADNQPGVLIQVFEGERARTKDCN 452
Score = 30.7 bits (66), Expect = 0.16
Identities = 10/24 (41%), Positives = 20/24 (83%)
Frame = +2
Query: 506 QNALESYCFSMKSTMEDEKLKEKI 577
+N LESY +S++++++D LK+K+
Sbjct: 537 KNHLESYAYSLRNSLDDPNLKDKV 560
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 145 bits (352), Expect = 4e-36
Identities = 69/87 (79%), Positives = 76/87 (87%)
Frame = +3
Query: 255 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 434
LLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRLSKEE
Sbjct: 453 LLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEE 512
Query: 435 IERMVNEAEKYRNEDDKQKETIQAKMH 515
I+RMV EAEKY+ ED+ + IQAK H
Sbjct: 513 IDRMVAEAEKYKAEDEAESGRIQAKNH 539
Score = 123 bits (296), Expect = 2e-29
Identities = 61/85 (71%), Positives = 66/85 (77%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
AYGAAVQAA+L GD SE+ QD GIETAGGVMT LIKRNTTIPTK+++ F
Sbjct: 368 AYGAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGIETAGGVMTPLIKRNTTIPTKKSEIFS 427
Query: 181 TYSDNQPGVLIQVFEGERAMTKDNN 255
TYSDNQPGVLIQVFEGERA TKD N
Sbjct: 428 TYSDNQPGVLIQVFEGERARTKDCN 452
Score = 30.7 bits (66), Expect = 0.16
Identities = 10/24 (41%), Positives = 20/24 (83%)
Frame = +2
Query: 506 QNALESYCFSMKSTMEDEKLKEKI 577
+N LESY +S++++++D LK+K+
Sbjct: 537 KNHLESYAYSLRNSLDDPNLKDKV 560
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 120 bits (288), Expect = 2e-28
Identities = 57/86 (66%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS-TNKENKITITNDKGRLSKE 431
LLGKF+L GIPPAPRGVPQIEVTF++DANG+L VSA++KS K K+ I NDKGRLS+E
Sbjct: 482 LLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEE 541
Query: 432 EIERMVNEAEKYRNEDDKQKETIQAK 509
+IERMV EAE++ ED KE I+A+
Sbjct: 542 DIERMVKEAEEFAEEDKILKERIEAR 567
Score = 91.1 bits (216), Expect = 1e-19
Identities = 47/85 (55%), Positives = 57/85 (67%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
AYGAAVQA +L G++ + + GIET GGVMT LI RNT IPT+++Q F
Sbjct: 399 AYGAAVQAGVLSGEEGSD--NIVLLDVIPLTLGIETTGGVMTKLIGRNTPIPTRKSQIFS 456
Query: 181 TYSDNQPGVLIQVFEGERAMTKDNN 255
T DNQ VLIQV+EGER +TKDNN
Sbjct: 457 TAVDNQNTVLIQVYEGERTLTKDNN 481
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 102 bits (245), Expect = 3e-23
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = +3
Query: 252 QLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKE 431
+L+G F+LTGI PAP+G PQIEV+FD+DA+GI+NVSA +K+TNK++ IT+ G L+
Sbjct: 495 KLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVAGSSG-LTDS 553
Query: 432 EIERMVNEAEKYRNEDDKQKETIQ 503
EIE MV +AEKYR D +KE I+
Sbjct: 554 EIEAMVADAEKYRASDMARKEAIE 577
Score = 77.0 bits (181), Expect = 2e-15
Identities = 40/84 (47%), Positives = 51/84 (60%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
A GAA+Q +L G V+D GIET GGV T LI RNTTIPT+++Q F
Sbjct: 415 AIGAAIQGGVLSG----HVKDLVLLDVTPLSLGIETLGGVFTRLINRNTTIPTRKSQVFS 470
Query: 181 TYSDNQPGVLIQVFEGERAMTKDN 252
T +D Q V I+VF+GER + +DN
Sbjct: 471 TAADGQTAVEIRVFQGERELVRDN 494
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 93.5 bits (222), Expect = 2e-20
Identities = 40/84 (47%), Positives = 60/84 (71%)
Frame = +3
Query: 258 LGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEI 437
LG+F+LTGIPP PRG ++E TF++DANGIL V+A+EK+T + I ITN G LS +I
Sbjct: 459 LGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHLSSTKI 518
Query: 438 ERMVNEAEKYRNEDDKQKETIQAK 509
+ M+ A+K++ +D + ++AK
Sbjct: 519 QEMIENADKFKQQDKDFAKKLEAK 542
Score = 61.7 bits (143), Expect = 8e-11
Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 AYGAAVQAAILHGDK-SEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTF 177
AYGAAVQAA+L S++ QD G+ G V + RNT IPT + +TF
Sbjct: 372 AYGAAVQAAVLTNKADSDKTQDLLLLDVVPLSLGVAMEGNVFGVVCPRNTPIPTIKKRTF 431
Query: 178 XTYSDNQPGVLIQVFEGERAMTKDN 252
T +DNQ V V++GER +N
Sbjct: 432 TTVADNQTTVTFPVYQGERVNCAEN 456
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 30.3 bits (65), Expect = 0.22
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 333 DANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK 491
D LNVS + S +E +T ++ R+ +EE +RM ++ E K+K
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRK 110
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.50
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 411 KGRLSKEEIERMVNEAEKYRNEDD 482
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 348 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 479
L VS ++S K + + K EE+E VNE E++R D
Sbjct: 257 LCVSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +2
Query: 341 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRDRAY 445
R P R +YRE H + + H R QGR +Y
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSY 355
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 2.7
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 378 NKENKITITNDKGRLSKEEIERMVNEAE 461
NK+ K T D SKEE+E +V E E
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE 556
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 26.6 bits (56), Expect = 2.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -2
Query: 358 ETLRIPLASMSKVTSI*GTPRGAGGIP 278
E L PLA MS TSI G G GG P
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFP 102
>SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 26.6 bits (56), Expect = 2.7
Identities = 15/71 (21%), Positives = 33/71 (46%)
Frame = +3
Query: 360 AIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKMHWNLTASA* 539
A++ ST + + + +TN +E I ++ + + + ET+ A W + +
Sbjct: 245 ALKPSTGRISYLNVTNSYS--GQELIPSVIGPMARSLKDIEFFTETVIASEAWKIDSKLL 302
Query: 540 SLPWRMRSSRK 572
+PW+ +S K
Sbjct: 303 PIPWKNQSHLK 313
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 26.2 bits (55), Expect = 3.5
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -3
Query: 315 QFEARHAAPVGSRSARIYRAIVIFGHSTLTLKYLDEYSGLVIRVGXECLSLFS 157
QF+ R A GSR +R++V+ + T++ LD Y I V E FS
Sbjct: 977 QFKLRLMALPGSRIRPPFRSLVVSINGLATIRTLDNYLHSRISVRNETGRRFS 1029
>SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 257
Score = 25.4 bits (53), Expect = 6.2
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 303 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITN-DKGRLSKEEIERMVNEAEK 464
+P TF NG++N+S + ++ N E + DKGR + + ++ E K
Sbjct: 122 IPVKRGTFIEFRNGMINISPVGRNANTEERNEFERFDKGRKIRATMVDVLREKFK 176
>SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 693
Score = 25.4 bits (53), Expect = 6.2
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = -3
Query: 213 DEYSGLVIRVGXECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTV 34
D+YS L + + EC+++F + D S+ N EGK ++L LL
Sbjct: 343 DQYS-LHLTMAQECMNIFEKQQLNLIGAIEQDLSTGSNVEGKVPRSVLSELLPLLDEGNA 401
Query: 33 QDSS 22
++S+
Sbjct: 402 EEST 405
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 25.4 bits (53), Expect = 6.2
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +3
Query: 354 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE 494
V A+ KS +++ ++ G + EEI ++++ E E+D++ E
Sbjct: 597 VPALFKSIDQDESDILSERIGAPTAEEISQLLDSVETNEEENDEELE 643
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 6.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 369 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 497
K NK+++ + +K +L +E+ AEK N DDK + T
Sbjct: 39 KQKNKKSRNQVRREKKKLLREKTNSGAKLAEK--NSDDKDQLT 79
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 6.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 339 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 479
N + N S +KS+NKE + + RLS + + K ++ED
Sbjct: 409 NTVQNESKSQKSSNKEGRSSRGGFFSRLSFSRSSSRMKKGSKAKHED 455
>SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate
synthase Lsp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 6.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 488 KGDHPGQNALESYCFSMKSTMEDEKLKEKISD 583
KG H N + S+K MEDEKL EK+++
Sbjct: 104 KGVHAAGNVI-----SLKLIMEDEKLIEKVNE 130
>SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 509
Score = 25.0 bits (52), Expect = 8.1
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +3
Query: 339 NGILNVSAIEKSTNKENKITITNDKGRLSKEE 434
+GIL+ + IEK +K K+ + N+ G++S ++
Sbjct: 154 DGILSFTVIEKVDDKNLKVRV-NNNGKISSKK 184
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,149,188
Number of Sequences: 5004
Number of extensions: 38365
Number of successful extensions: 188
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 252150250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -