Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30545
(584 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 157 6e-39
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 6e-35
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 142 1e-34
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 125 3e-29
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 5e-24
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 78 5e-15
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.098
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.52
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 30 1.2
SB_8849| Best HMM Match : F-box (HMM E-Value=0.86) 30 1.6
SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06) 30 1.6
SB_23493| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06) 30 1.6
SB_49603| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_28298| Best HMM Match : IncA (HMM E-Value=0.32) 29 3.7
SB_3878| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 29 3.7
SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_1333| Best HMM Match : IncA (HMM E-Value=0.32) 29 3.7
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 28 4.9
SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94) 28 6.4
SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_2761| Best HMM Match : zf-TRAF (HMM E-Value=0.26) 28 6.4
SB_58395| Best HMM Match : IncA (HMM E-Value=3.7) 27 8.5
SB_39571| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_19601| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_6351| Best HMM Match : IncA (HMM E-Value=0.13) 27 8.5
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 157 bits (381), Expect = 6e-39
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +3
Query: 255 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 434
LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA++KST KENKITITNDKGRLSKE+
Sbjct: 457 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKED 516
Query: 435 IERMVNEAEKYRNEDDKQKETIQAK 509
IERMVNEA KY+ ED+KQ++ IQ K
Sbjct: 517 IERMVNEASKYKEEDEKQRDRIQTK 541
Score = 130 bits (313), Expect = 1e-30
Identities = 63/85 (74%), Positives = 68/85 (80%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
AYGAAVQAAILHGDK + V+D GIETAGGVM+ LIKRN+TIPTKQTQTF
Sbjct: 372 AYGAAVQAAILHGDKDDTVKDLLLLDVAPLSMGIETAGGVMSVLIKRNSTIPTKQTQTFT 431
Query: 181 TYSDNQPGVLIQVFEGERAMTKDNN 255
TYSDNQPGVLIQVFEGER+MT NN
Sbjct: 432 TYSDNQPGVLIQVFEGERSMTAHNN 456
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/26 (65%), Positives = 25/26 (96%)
Frame = +2
Query: 506 QNALESYCFSMKSTMEDEKLKEKISD 583
+N+LESY +SMKST+ED+K+K+KIS+
Sbjct: 541 KNSLESYAYSMKSTVEDDKVKDKISE 566
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 144 bits (348), Expect = 6e-35
Identities = 66/85 (77%), Positives = 78/85 (91%)
Frame = +3
Query: 255 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 434
LLGKFEL+GIPPAPRGVPQI+VTFD+D+NGILNVSA++KST KENKITITNDKGRLSKE+
Sbjct: 549 LLGKFELSGIPPAPRGVPQIDVTFDVDSNGILNVSAVDKSTGKENKITITNDKGRLSKED 608
Query: 435 IERMVNEAEKYRNEDDKQKETIQAK 509
IERMV EAEK++ D+ +E IQ+K
Sbjct: 609 IERMVKEAEKFKAADEAVRERIQSK 633
Score = 130 bits (314), Expect = 8e-31
Identities = 63/85 (74%), Positives = 67/85 (78%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
AYGAAVQAAILHGDKSE QD G+ETAGGVMT IKRNTTIPTKQTQTF
Sbjct: 464 AYGAAVQAAILHGDKSEATQDLLLLDVAPLTLGLETAGGVMTAAIKRNTTIPTKQTQTFT 523
Query: 181 TYSDNQPGVLIQVFEGERAMTKDNN 255
TYSDNQ VLIQV+EGER++TKDNN
Sbjct: 524 TYSDNQTSVLIQVYEGERSLTKDNN 548
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/26 (73%), Positives = 25/26 (96%)
Frame = +2
Query: 506 QNALESYCFSMKSTMEDEKLKEKISD 583
+N+LESY FSMKSTMEDEK+K+K+S+
Sbjct: 633 KNSLESYAFSMKSTMEDEKVKDKLSE 658
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 142 bits (345), Expect = 1e-34
Identities = 66/85 (77%), Positives = 77/85 (90%)
Frame = +3
Query: 255 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 434
LLGKF+L+GIPPAPRGVPQIEVTFDIDANGILNVSA +KST K ITITNDKGRLSKEE
Sbjct: 456 LLGKFDLSGIPPAPRGVPQIEVTFDIDANGILNVSAKDKSTGKTGSITITNDKGRLSKEE 515
Query: 435 IERMVNEAEKYRNEDDKQKETIQAK 509
I+RM+N+AEKY++ED+ Q+E I A+
Sbjct: 516 IDRMINDAEKYKSEDEAQREKIAAR 540
Score = 116 bits (278), Expect = 2e-26
Identities = 58/85 (68%), Positives = 63/85 (74%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
AYGAAVQAAIL GDKS+EV+D GIETAG VMT LI+RN IPTK TQTF
Sbjct: 371 AYGAAVQAAILSGDKSDEVKDVLLVDVAPLSLGIETAGEVMTKLIERNARIPTKATQTFT 430
Query: 181 TYSDNQPGVLIQVFEGERAMTKDNN 255
TYSDNQP V I+VFEGER +TK NN
Sbjct: 431 TYSDNQPAVTIRVFEGERPLTKHNN 455
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 506 QNALESYCFSMKSTMEDEKLKEKIS 580
+N LESY F +KS + + L+ K+S
Sbjct: 540 RNRLESYAFGVKSAISEPSLEGKLS 564
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 125 bits (301), Expect = 3e-29
Identities = 57/84 (67%), Positives = 70/84 (83%)
Frame = +3
Query: 258 LGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEI 437
LGKF+L GIPPAPRGVPQIEVTF+ID NGIL VSA +K T + KITITND+ RL+ E+I
Sbjct: 1151 LGKFDLNGIPPAPRGVPQIEVTFEIDVNGILRVSAEDKGTGNKEKITITNDQNRLTPEDI 1210
Query: 438 ERMVNEAEKYRNEDDKQKETIQAK 509
ERMVN+AEK+ +ED K KE ++A+
Sbjct: 1211 ERMVNDAEKFADEDKKTKEKVEAR 1234
Score = 93.9 bits (223), Expect = 9e-20
Identities = 49/85 (57%), Positives = 57/85 (67%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
AYGAAVQA +L G+ E+ + GIET GGVMT LI RNT IPTK++Q F
Sbjct: 1067 AYGAAVQAGVLGGE--EDTGEVVLLDVNPLTLGIETVGGVMTKLISRNTVIPTKKSQVFS 1124
Query: 181 TYSDNQPGVLIQVFEGERAMTKDNN 255
T +DNQ V IQVFEGER MTKDN+
Sbjct: 1125 TAADNQNTVTIQVFEGERPMTKDNH 1149
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 107 bits (258), Expect = 5e-24
Identities = 54/86 (62%), Positives = 66/86 (76%)
Frame = +3
Query: 252 QLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKE 431
+LLG+F+L GIPPAPRGVPQ+EVTFDIDANGI+NVSA +K T +E +I I G LSK+
Sbjct: 260 KLLGQFQLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDKGTGREQQIVI-QSSGGLSKD 318
Query: 432 EIERMVNEAEKYRNEDDKQKETIQAK 509
IE M+ EAEKY E DKQK+ + K
Sbjct: 319 AIENMIKEAEKYA-EADKQKKVEKLK 343
Score = 78.2 bits (184), Expect = 5e-15
Identities = 43/84 (51%), Positives = 51/84 (60%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
A GAA+Q +L GD V+D GIET GGV T LI RNTTIPTK++Q F
Sbjct: 180 AIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFS 235
Query: 181 TYSDNQPGVLIQVFEGERAMTKDN 252
T +D Q V I+VF+GER M DN
Sbjct: 236 TAADGQTQVEIKVFQGEREMAIDN 259
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 78.2 bits (184), Expect = 5e-15
Identities = 43/84 (51%), Positives = 51/84 (60%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
A GAA+Q +L GD V+D GIET GGV T LI RNTTIPTK++Q F
Sbjct: 125 AIGAAIQGGVLAGD----VKDVLLLDVTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFS 180
Query: 181 TYSDNQPGVLIQVFEGERAMTKDN 252
T +D Q V I+VF+GER M DN
Sbjct: 181 TAADGQTQVEIKVFQGEREMAIDN 204
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 33.9 bits (74), Expect = 0.098
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
AYGAAVQA+IL G K ++ + M +I + P ++ TF
Sbjct: 79 AYGAAVQASILMGRKEADMITEIETMSKAICVSVGGESSRMIPVIPQYCPYPLRRAHTFT 138
Query: 181 TYSDNQ 198
T +D+Q
Sbjct: 139 TATDDQ 144
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 360 AIEKSTNKENKITITNDKGRLSKEEIER--MVNEAEKYRNEDDKQKETIQAK 509
A +K+T+K + ITN G++ KEE +R V E++K K++E I+ K
Sbjct: 1132 AEQKATSKLQEEEITNAMGKIEKEEAKRKAAVEESQKAIEAARKKQEEIRQK 1183
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 31.5 bits (68), Expect = 0.52
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 320 HLRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQ 427
H +H+ ++ Q+ +Y++ HQ Q H Q+Q+ Q
Sbjct: 291 HQQHQLHQHQQQHQYQQQHQHQHQHQHQQQQQQQQQ 326
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 366 EKSTNKENKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQK 491
+K+ + NKI + N+ + SKE++ER V AE + R+ D + K
Sbjct: 1031 DKTRRQLNKILVENENLKGSKEDLERRVVVAENRLRDTDSEMK 1073
>SB_8849| Best HMM Match : F-box (HMM E-Value=0.86)
Length = 1222
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = -3
Query: 153 DGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTVQDSSL 19
DG+V LDE + +++SL++ G C + ++ + + TV++SSL
Sbjct: 1160 DGAVLLDEWNYGSNASLSSCGSTC--SESRLSYFIGQDTVEESSL 1202
>SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06)
Length = 348
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +3
Query: 309 QIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNE 476
++E+ I+ L A ++ ++T D G + EE++R+ NE EK +NE
Sbjct: 99 EVELRKTIEQKEHLLQMAEKEIVKLREQLTSKADYGNIHAEELQRIRNELEKCKNE 154
>SB_23493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1230
Score = 29.9 bits (64), Expect = 1.6
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Frame = +2
Query: 131 SSSVT-LPSPLNRLRHSXPTLITNPEYSSKYLRVSVL*P------KITIAR*IRADRDPT 289
S VT + SPLN ++ T ++ ++S+ Y L P K+TI++ + +
Sbjct: 172 SPKVTPMVSPLNGFFNATWTYRSDSDFSAAYATYVPLSPTEMSYKKVTISKRDYSKGKTS 231
Query: 290 GAAWRASN*GHLRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQGR 433
AW SN R R + + +Y +VH G HY + R +G+
Sbjct: 232 LVAWVVSNCS-ARLRNEFVAELMKYIDVHVYGSCSSHYNQTRVCNRGK 278
>SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06)
Length = 364
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +3
Query: 309 QIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNE 476
++E+ I+ L A ++ ++T D G + EE++R+ NE EK +NE
Sbjct: 99 EVELRKTIEQKEHLLQMAEKEIVKLREQLTSKADYGNIHAEELQRIRNELEKCKNE 154
>SB_49603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 363 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 485
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 66 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 106
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 363 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 485
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 78 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 118
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 363 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 485
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 90 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 130
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 363 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 485
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 102 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 142
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 363 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 485
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 114 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 154
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 363 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 485
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 126 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 166
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 408 DKGRLSKEEIERMVNEAEKYRNEDDKQKE 494
DK +L KEE E+ + E NE KQKE
Sbjct: 1606 DKYQLEKEEAEKRLQSYEDELNEKQKQKE 1634
>SB_28298| Best HMM Match : IncA (HMM E-Value=0.32)
Length = 225
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +3
Query: 255 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 434
L G L G+ A GV +T + + V A K + ++ GR+S EE
Sbjct: 106 LAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSTSELVSKALQDGRISDEE 165
Query: 435 IERMVNEAEKYR 470
++ E E+Y+
Sbjct: 166 FRLILQEQERYK 177
>SB_3878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 354 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK---YRNEDDKQKETIQAK 509
V IEK + K I + KEEIE ++ EK EDD +KE I +
Sbjct: 145 VEEIEKREDANEKEEIEEREDANEKEEIEEREDDNEKEEIEEREDDNEKEEIDER 199
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 408 DKGRLSKEEIERMVNEAEKYRNEDDKQK 491
++ + KEE ER+ EAE+ R ED++Q+
Sbjct: 411 EEEKRQKEEEERLRVEAERQREEDERQR 438
>SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 332 RCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRD 436
R QRY + + RE HQ+G HH R S + RD
Sbjct: 134 RDQRY-RDYEDRERHQRGRDRHHRDRDDSGCRFRD 167
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 399 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAK 509
+ +K RL EE+ER+ E +K E+ K++ET++ K
Sbjct: 277 LEEEKKRL--EELERLKEEKDKMLEEELKKRETLEEK 311
>SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 338 QRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRDR 439
QR QR R R+ H+Q ++ QRQR + R R
Sbjct: 36 QRQRQRQRQRQRHRQRQRQRQRQRQRQRQRQRQR 69
>SB_1333| Best HMM Match : IncA (HMM E-Value=0.32)
Length = 302
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +3
Query: 255 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 434
L G L G+ A GV +T + + V A K + ++ GR+S EE
Sbjct: 183 LAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSTSELVSKALQDGRISDEE 242
Query: 435 IERMVNEAEKYR 470
++ E E+Y+
Sbjct: 243 FRLILQEQERYK 254
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = +3
Query: 351 NVSAIEKSTNKENKITITNDKGRLSKE-EIERMVN---EAEKYRNEDDKQKET 497
N+ + EK+ +K+ +TN++ SKE ++ N E + +N DD+Q++T
Sbjct: 46 NLDSEEKTEDKQTASDLTNEENAESKEITADQPTNNELETDNAQNVDDQQQQT 98
>SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94)
Length = 592
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 350 QRFRYREVHQQGEQD-HHYQRQRSSLQGRDRAYG**GREVQKRG*QAKGDHPG 505
+R+R R+V Q+GE++ H+Q + + D R+V +RG + + HPG
Sbjct: 200 RRYRTRQVSQRGERERRHHQEWQYAATVLD-------RQVSERGKRERRHHPG 245
>SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 363 IEKSTNKENKITITNDKGRLSK-EEIERMVNEAEKYRNEDDKQKETIQAKM 512
I K+ +E K+ + +K + S+ E++E+ NEAEK N K+KE + +++
Sbjct: 160 ISKNELEEKKLGL--EKKKTSEIEDLEKERNEAEKKYNSLRKEKENLVSEL 208
>SB_2761| Best HMM Match : zf-TRAF (HMM E-Value=0.26)
Length = 436
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 299 WRASN*GHLRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQ 427
WR N GH++ R Q P +Y+ + + + H QR L+
Sbjct: 246 WRRQNHGHIQSRTQVQPSSQQYKTLPSE-QSSPHKMSQREPLK 287
>SB_58395| Best HMM Match : IncA (HMM E-Value=3.7)
Length = 165
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +3
Query: 255 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 434
L G L G+ A GV +T + + V A K + ++ GR+S EE
Sbjct: 46 LAGVAGLVGVLGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSTSELVSKALQDGRISDEE 105
Query: 435 IERMVNEAEKY 467
++ E E+Y
Sbjct: 106 FRLILQEQERY 116
>SB_39571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +3
Query: 255 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 434
L G L G+ A GV +T + + VSA K + ++ G +S EE
Sbjct: 107 LAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVSAESKKNSISELVSKALQDGHISDEE 166
Query: 435 IERMVNEAEKY 467
++ E E+Y
Sbjct: 167 FRLILQEQERY 177
>SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 360 AIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK 491
A + + ++ +K T N RLS + ER E KY + D+ K
Sbjct: 619 AQDNTRSRTHKFTPKNKLKRLSGIKTERQKTERHKYHKKPDRDK 662
>SB_19601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 303 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRL 422
VP+I + D + I V + ++ +NKI ND+G++
Sbjct: 62 VPEITESIDFASGSIREVPSSTENKGNKNKILEKNDQGKM 101
>SB_6351| Best HMM Match : IncA (HMM E-Value=0.13)
Length = 417
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +3
Query: 255 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 434
L G L G+ A GV +T + + V A K + ++ GR+S EE
Sbjct: 298 LAGVAGLVGVVGAAAGVVSRGLTSKVAKHEDTMVLAESKKNSISELVSKALQDGRISDEE 357
Query: 435 IERMVNEAEKY 467
++ E E+Y
Sbjct: 358 FRLILQEQERY 368
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,779,125
Number of Sequences: 59808
Number of extensions: 321234
Number of successful extensions: 1384
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1410146228
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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