Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30545
(584 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2 (HS... 141 3e-34
At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1 (HS... 140 8e-34
At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70... 139 1e-33
At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3 (HS... 139 1e-33
At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein, puta... 132 2e-31
At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70... 130 7e-31
At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)... 130 9e-31
At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)... 128 3e-30
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 114 5e-26
At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)... 104 5e-23
At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70... 103 9e-23
At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial, p... 101 4e-22
At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)... 101 5e-22
At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)... 97 6e-21
At2g32120.2 68415.m03926 heat shock protein 70 family protein / ... 51 7e-07
At2g32120.1 68415.m03925 heat shock protein 70 family protein / ... 51 7e-07
At2g44200.1 68415.m05500 expressed protein 33 0.14
At5g61460.1 68418.m07712 structural maintenance of chromosomes (... 33 0.19
At2g31070.1 68415.m03791 TCP family transcription factor, putati... 31 0.57
At1g79580.3 68414.m09279 no apical meristem (NAM) family protein... 31 0.75
At1g79580.2 68414.m09278 no apical meristem (NAM) family protein... 31 0.75
At1g79580.1 68414.m09277 no apical meristem (NAM) family protein... 31 0.75
At2g01730.1 68415.m00101 metallo-beta-lactamase family protein s... 30 1.3
At1g18860.1 68414.m02348 WRKY family transcription factor contai... 29 1.7
At1g13190.1 68414.m01529 RNA recognition motif (RRM)-containing ... 29 1.7
At5g25300.1 68418.m03001 F-box family protein PF0064: F-box doma... 29 3.0
At4g37090.1 68417.m05254 expressed protein 29 3.0
At3g28770.1 68416.m03591 expressed protein 29 3.0
At1g03080.1 68414.m00282 kinase interacting family protein simil... 29 3.0
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 28 4.0
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 28 4.0
At5g40010.1 68418.m04852 AAA-type ATPase family protein contains... 28 5.3
At3g58840.1 68416.m06558 expressed protein 28 5.3
At1g25540.1 68414.m03171 phytochrome and flowering time regulato... 27 7.0
At4g26600.1 68417.m03834 nucleolar protein, putative similar to ... 27 9.2
At4g16860.1 68417.m02547 disease resistance protein (TIR-NBS-LRR... 27 9.2
At2g24420.2 68415.m02918 DNA repair ATPase-related contains 2 tr... 27 9.2
At2g24420.1 68415.m02917 DNA repair ATPase-related contains 2 tr... 27 9.2
>At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2
(HSC70-2) (HSP70-2) identical to SP|P22954 Heat shock
cognate 70 kDa protein 2 (Hsc70.2) {Arabidopsis
thaliana}
Length = 653
Score = 141 bits (342), Expect = 3e-34
Identities = 65/85 (76%), Positives = 78/85 (91%)
Frame = +3
Query: 255 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 434
LLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA +K+T K+NKITITNDKGRLSKE+
Sbjct: 461 LLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGKKNKITITNDKGRLSKED 520
Query: 435 IERMVNEAEKYRNEDDKQKETIQAK 509
IE+MV EAEKY++ED++ K+ ++AK
Sbjct: 521 IEKMVQEAEKYKSEDEEHKKKVEAK 545
Score = 126 bits (305), Expect = 8e-30
Identities = 62/85 (72%), Positives = 68/85 (80%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
AYGAAVQAAIL G+ +E+VQD G+ETAGGVMTTLI+RNTTIPTK+ Q F
Sbjct: 376 AYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLIQRNTTIPTKKEQVFS 435
Query: 181 TYSDNQPGVLIQVFEGERAMTKDNN 255
TYSDNQPGVLIQVFEGERA TKDNN
Sbjct: 436 TYSDNQPGVLIQVFEGERARTKDNN 460
Score = 33.9 bits (74), Expect = 0.080
Identities = 12/24 (50%), Positives = 21/24 (87%)
Frame = +2
Query: 506 QNALESYCFSMKSTMEDEKLKEKI 577
+NALE+Y ++M++T+ DEK+ EK+
Sbjct: 545 KNALENYAYNMRNTIRDEKIGEKL 568
>At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1
(HSC70-1) (HSP70-1) identical to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}
Length = 651
Score = 140 bits (338), Expect = 8e-34
Identities = 64/85 (75%), Positives = 78/85 (91%)
Frame = +3
Query: 255 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 434
LLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA +K+T ++NKITITNDKGRLSK+E
Sbjct: 461 LLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDE 520
Query: 435 IERMVNEAEKYRNEDDKQKETIQAK 509
IE+MV EAEKY++ED++ K+ ++AK
Sbjct: 521 IEKMVQEAEKYKSEDEEHKKKVEAK 545
Score = 123 bits (296), Expect = 1e-28
Identities = 60/85 (70%), Positives = 66/85 (77%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
AYGAAVQ AIL G+ +E+VQD G+ETAGGVMTTLI RNTTIPTK+ Q F
Sbjct: 376 AYGAAVQGAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLIPRNTTIPTKKEQVFS 435
Query: 181 TYSDNQPGVLIQVFEGERAMTKDNN 255
TYSDNQPGVLIQV+EGERA TKDNN
Sbjct: 436 TYSDNQPGVLIQVYEGERARTKDNN 460
Score = 34.7 bits (76), Expect = 0.046
Identities = 12/24 (50%), Positives = 22/24 (91%)
Frame = +2
Query: 506 QNALESYCFSMKSTMEDEKLKEKI 577
+NALE+Y ++M++T++DEK+ EK+
Sbjct: 545 KNALENYAYNMRNTIQDEKIGEKL 568
>At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein
GI:425194 [Spinacia oleracea]
Length = 650
Score = 139 bits (336), Expect = 1e-33
Identities = 65/85 (76%), Positives = 76/85 (89%)
Frame = +3
Query: 255 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 434
LLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA +K+T ++NKITITNDKGRLSKEE
Sbjct: 461 LLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEE 520
Query: 435 IERMVNEAEKYRNEDDKQKETIQAK 509
IE+MV EAEKY+ ED++ K+ + AK
Sbjct: 521 IEKMVQEAEKYKAEDEEHKKKVDAK 545
Score = 122 bits (294), Expect = 2e-28
Identities = 60/85 (70%), Positives = 66/85 (77%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
AYGAAVQAAIL G+ +E+VQD G+ETAGGVMT LI RNTTIPTK+ Q F
Sbjct: 376 AYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFS 435
Query: 181 TYSDNQPGVLIQVFEGERAMTKDNN 255
TYSDNQPGVLIQV+EGERA TKDNN
Sbjct: 436 TYSDNQPGVLIQVYEGERARTKDNN 460
Score = 32.7 bits (71), Expect = 0.19
Identities = 11/24 (45%), Positives = 21/24 (87%)
Frame = +2
Query: 506 QNALESYCFSMKSTMEDEKLKEKI 577
+NALE+Y ++M++T++DEK+ K+
Sbjct: 545 KNALENYAYNMRNTIKDEKIASKL 568
>At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3
(HSC70-3) (HSP70-3) identical to SP|O65719 Heat shock
cognate 70 kDa protein 3 (Hsc70.3) {Arabidopsis
thaliana}
Length = 649
Score = 139 bits (336), Expect = 1e-33
Identities = 64/85 (75%), Positives = 77/85 (90%)
Frame = +3
Query: 255 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 434
LLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA +K+T ++NKITITNDKGRLSK+E
Sbjct: 461 LLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDE 520
Query: 435 IERMVNEAEKYRNEDDKQKETIQAK 509
IE+MV EAEKY++ED++ K+ + AK
Sbjct: 521 IEKMVQEAEKYKSEDEEHKKKVDAK 545
Score = 123 bits (297), Expect = 8e-29
Identities = 60/85 (70%), Positives = 67/85 (78%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
AYGAAVQAAIL G+ +E+VQD G+ETAGGVMT LI+RNTTIPTK+ Q F
Sbjct: 376 AYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIQRNTTIPTKKEQVFS 435
Query: 181 TYSDNQPGVLIQVFEGERAMTKDNN 255
TYSDNQPGVLIQV+EGERA TKDNN
Sbjct: 436 TYSDNQPGVLIQVYEGERARTKDNN 460
Score = 34.3 bits (75), Expect = 0.061
Identities = 12/25 (48%), Positives = 22/25 (88%)
Frame = +2
Query: 506 QNALESYCFSMKSTMEDEKLKEKIS 580
+NALE+Y ++M++T+ DEK+ EK++
Sbjct: 545 KNALENYAYNMRNTIRDEKIGEKLA 569
>At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein,
putative / HSC70, putative / HSP70, putative strong
similarity to heat shock cognate 70 kd protein 1
SP:P22953 [Arabidopsis thaliana (Mouse-ear cress)]
Length = 617
Score = 132 bits (318), Expect = 2e-31
Identities = 58/85 (68%), Positives = 76/85 (89%)
Frame = +3
Query: 255 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 434
+LG+F L+GIPPAPRG+PQ V FDID+NGILNVSA +K+T K+NKITITNDKGRLSK++
Sbjct: 461 ILGQFVLSGIPPAPRGIPQFTVCFDIDSNGILNVSAEDKATGKKNKITITNDKGRLSKDD 520
Query: 435 IERMVNEAEKYRNEDDKQKETIQAK 509
IE+MV EAEKY++ED++ K+ ++AK
Sbjct: 521 IEKMVQEAEKYKSEDEEHKKKVEAK 545
Score = 109 bits (263), Expect = 1e-24
Identities = 56/85 (65%), Positives = 62/85 (72%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
AYGAAVQAAIL G+ +E+VQD GIET GGVMTTLI+RNTTIP K+ Q F
Sbjct: 376 AYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGIETIGGVMTTLIQRNTTIPAKKEQEFT 435
Query: 181 TYSDNQPGVLIQVFEGERAMTKDNN 255
T DNQP VLIQV+EGERA T DNN
Sbjct: 436 TTVDNQPDVLIQVYEGERARTIDNN 460
>At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70,
putative similar to heat shock protein hsp70 GI:1771478
from [Pisum sativum]
Length = 646
Score = 130 bits (314), Expect = 7e-31
Identities = 61/85 (71%), Positives = 73/85 (85%)
Frame = +3
Query: 255 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 434
LLG FEL GIPPAPRGVPQI V FDIDANGILNVSA +K+ +N+ITITNDKGRLSKEE
Sbjct: 460 LLGTFELKGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNQITITNDKGRLSKEE 519
Query: 435 IERMVNEAEKYRNEDDKQKETIQAK 509
IE+MV +AEKY+ ED++ K+ ++AK
Sbjct: 520 IEKMVQDAEKYKAEDEQVKKKVEAK 544
Score = 118 bits (284), Expect = 3e-27
Identities = 57/85 (67%), Positives = 65/85 (76%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
AYGAAVQAAIL G+ SE+VQD G+ETAGGVMT LI RNTT+P K+ Q F
Sbjct: 375 AYGAAVQAAILTGEGSEKVQDLLLLDVAPLSLGLETAGGVMTVLIPRNTTVPCKKEQVFS 434
Query: 181 TYSDNQPGVLIQVFEGERAMTKDNN 255
TY+DNQPGVLIQV+EGERA T+DNN
Sbjct: 435 TYADNQPGVLIQVYEGERARTRDNN 459
Score = 34.7 bits (76), Expect = 0.046
Identities = 13/33 (39%), Positives = 25/33 (75%)
Frame = +2
Query: 482 QAKGDHPGQNALESYCFSMKSTMEDEKLKEKIS 580
Q K +N+LE+Y ++M++T++DEKL +K++
Sbjct: 536 QVKKKVEAKNSLENYAYNMRNTIKDEKLAQKLT 568
>At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 668
Score = 130 bits (313), Expect = 9e-31
Identities = 59/86 (68%), Positives = 73/86 (84%)
Frame = +3
Query: 252 QLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKE 431
+LLGKF+LTG+PPAPRG PQIEVTF++DANGILNV A +K++ K KITITN+KGRLS+E
Sbjct: 485 RLLGKFDLTGVPPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNEKGRLSQE 544
Query: 432 EIERMVNEAEKYRNEDDKQKETIQAK 509
EI+RMV EAE++ ED K KE I A+
Sbjct: 545 EIDRMVKEAEEFAEEDKKVKEKIDAR 570
Score = 97.5 bits (232), Expect = 6e-21
Identities = 48/83 (57%), Positives = 55/83 (66%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
AYGAAVQ IL G+ +E +D GIET GGVMT LI RNT IPTK++Q F
Sbjct: 401 AYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFT 460
Query: 181 TYSDNQPGVLIQVFEGERAMTKD 249
TY D Q V IQVFEGER++TKD
Sbjct: 461 TYQDQQTTVSIQVFEGERSLTKD 483
>At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)
SWISS-PROT:Q9LKR3 PMID:8888624
Length = 669
Score = 128 bits (309), Expect = 3e-30
Identities = 59/86 (68%), Positives = 72/86 (83%)
Frame = +3
Query: 252 QLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKE 431
+LLGKF+L GIPPAPRG PQIEVTF++DANGILNV A +K++ K KITITN+KGRLS+E
Sbjct: 485 RLLGKFDLNGIPPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNEKGRLSQE 544
Query: 432 EIERMVNEAEKYRNEDDKQKETIQAK 509
EI+RMV EAE++ ED K KE I A+
Sbjct: 545 EIDRMVKEAEEFAEEDKKVKEKIDAR 570
Score = 97.5 bits (232), Expect = 6e-21
Identities = 48/83 (57%), Positives = 55/83 (66%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
AYGAAVQ IL G+ +E +D GIET GGVMT LI RNT IPTK++Q F
Sbjct: 401 AYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFT 460
Query: 181 TYSDNQPGVLIQVFEGERAMTKD 249
TY D Q V IQVFEGER++TKD
Sbjct: 461 TYQDQQTTVSIQVFEGERSLTKD 483
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 114 bits (274), Expect = 5e-26
Identities = 54/84 (64%), Positives = 64/84 (76%)
Frame = +3
Query: 258 LGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEI 437
LGKF+LTGI PAPRGVPQIEVTF++DANGIL V A +K ITITNDKGRL++EEI
Sbjct: 501 LGKFDLTGILPAPRGVPQIEVTFEVDANGILQVKAEDKVAKTSQSITITNDKGRLTEEEI 560
Query: 438 ERMVNEAEKYRNEDDKQKETIQAK 509
E M+ EAE++ ED KE I A+
Sbjct: 561 EEMIREAEEFAEEDKIMKEKIDAR 584
Score = 98.3 bits (234), Expect = 3e-21
Identities = 47/84 (55%), Positives = 55/84 (65%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
AYGAAVQ +L G+ EE Q+ GIET GGVMT +I RNT IPTK++Q F
Sbjct: 415 AYGAAVQGGVLSGEGGEETQNILLLDVAPLSLGIETVGGVMTNIIPRNTVIPTKKSQVFT 474
Query: 181 TYSDNQPGVLIQVFEGERAMTKDN 252
TY D Q V I V+EGER+MTKDN
Sbjct: 475 TYQDQQTTVTINVYEGERSMTKDN 498
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/27 (59%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Frame = +2
Query: 506 QNALESYCFSMKSTMED-EKLKEKISD 583
+N LE+Y ++MKST+ D EKL +KISD
Sbjct: 584 RNKLETYVYNMKSTVADKEKLAKKISD 610
>At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746590
Length = 682
Score = 104 bits (249), Expect = 5e-23
Identities = 50/86 (58%), Positives = 67/86 (77%)
Frame = +3
Query: 252 QLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKE 431
+LLG+F+L GIPP+PRGVPQIEVTFDIDANGI+ VSA +K+T K +ITI G LS++
Sbjct: 501 KLLGEFDLVGIPPSPRGVPQIEVTFDIDANGIVTVSAKDKTTGKVQQITI-RSSGGLSED 559
Query: 432 EIERMVNEAEKYRNEDDKQKETIQAK 509
+I++MV EAE + +D ++KE I K
Sbjct: 560 DIQKMVREAELHAQKDKERKELIDTK 585
Score = 77.4 bits (182), Expect = 7e-15
Identities = 43/84 (51%), Positives = 51/84 (60%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
A GAA+Q IL GD V++ GIET GGV T LI RNTTIPTK++Q F
Sbjct: 421 AMGAALQGGILRGD----VKELLLLDVTPLSLGIETLGGVFTRLITRNTTIPTKKSQVFS 476
Query: 181 TYSDNQPGVLIQVFEGERAMTKDN 252
T +DNQ V I+V +GER M DN
Sbjct: 477 TAADNQTQVGIRVLQGEREMATDN 500
>At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein 70
[Arabidopsis thaliana] GI:6746592; similar to heat shock
70 protein - Spinacia oleracea,PID:g2654208
Length = 718
Score = 103 bits (247), Expect = 9e-23
Identities = 48/84 (57%), Positives = 63/84 (75%)
Frame = +3
Query: 258 LGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEI 437
LG F L GIPPAPRGVPQIEV FDIDANGIL+VSA++K T K+ ITIT L K+E+
Sbjct: 525 LGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITG-ASTLPKDEV 583
Query: 438 ERMVNEAEKYRNEDDKQKETIQAK 509
++MV EAE++ +D ++++ I K
Sbjct: 584 DQMVQEAERFAKDDKEKRDAIDTK 607
Score = 74.1 bits (174), Expect = 6e-14
Identities = 39/84 (46%), Positives = 49/84 (58%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
A GAAVQA +L GD V D G+ET GGVMT +I RNTT+PT +++ F
Sbjct: 443 ALGAAVQAGVLAGD----VSDIVLLDVTPLSIGLETLGGVMTKIIPRNTTLPTSKSEVFS 498
Query: 181 TYSDNQPGVLIQVFEGERAMTKDN 252
T +D Q V I V +GER +DN
Sbjct: 499 TAADGQTSVEINVLQGEREFVRDN 522
>At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial,
putative / HSP70, mitochondrial, putative strong
similarity to SP|Q01899 Heat shock 70 kDa protein,
mitochondrial precursor {Phaseolus vulgaris}
Length = 682
Score = 101 bits (242), Expect = 4e-22
Identities = 50/86 (58%), Positives = 63/86 (73%)
Frame = +3
Query: 252 QLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKE 431
++LG+F+L GIPPAPRG+PQIEVTFDIDANGI VSA +K+T KE ITI G LS +
Sbjct: 496 KVLGEFDLVGIPPAPRGMPQIEVTFDIDANGITTVSAKDKATGKEQNITI-RSSGGLSDD 554
Query: 432 EIERMVNEAEKYRNEDDKQKETIQAK 509
EI RMV EAE +D ++K+ I +
Sbjct: 555 EINRMVKEAELNAQKDQEKKQLIDLR 580
Score = 77.0 bits (181), Expect = 9e-15
Identities = 43/84 (51%), Positives = 50/84 (59%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
A GAA+Q IL GD V+D GIET G V T LI RNTTIPTK++Q F
Sbjct: 416 AMGAAIQGGILRGD----VKDLLLLDVVPLSLGIETLGAVFTKLIPRNTTIPTKKSQVFS 471
Query: 181 TYSDNQPGVLIQVFEGERAMTKDN 252
T +DNQ V I+V +GER M DN
Sbjct: 472 TAADNQMQVGIKVLQGEREMAADN 495
>At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746592
Length = 718
Score = 101 bits (241), Expect = 5e-22
Identities = 48/84 (57%), Positives = 61/84 (72%)
Frame = +3
Query: 258 LGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEI 437
+G F L GIPPAPRGVPQIEV FDIDANGIL+VSA +K T K+ ITIT L K+E+
Sbjct: 525 IGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSASDKGTGKKQDITITG-ASTLPKDEV 583
Query: 438 ERMVNEAEKYRNEDDKQKETIQAK 509
+ MV EAE++ ED ++++ I K
Sbjct: 584 DTMVQEAERFAKEDKEKRDAIDTK 607
Score = 74.5 bits (175), Expect = 5e-14
Identities = 39/84 (46%), Positives = 49/84 (58%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
A GAAVQA +L GD V D G+ET GGVMT +I RNTT+PT +++ F
Sbjct: 443 ALGAAVQAGVLSGD----VSDIVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFS 498
Query: 181 TYSDNQPGVLIQVFEGERAMTKDN 252
T +D Q V I V +GER +DN
Sbjct: 499 TAADGQTSVEINVLQGEREFVRDN 522
>At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 613
Score = 97.5 bits (232), Expect = 6e-21
Identities = 48/83 (57%), Positives = 55/83 (66%)
Frame = +1
Query: 1 AYGAAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFX 180
AYGAAVQ IL G+ +E +D GIET GGVMT LI RNT IPTK++Q F
Sbjct: 401 AYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFT 460
Query: 181 TYSDNQPGVLIQVFEGERAMTKD 249
TY D Q V IQVFEGER++TKD
Sbjct: 461 TYQDQQTTVSIQVFEGERSLTKD 483
Score = 65.3 bits (152), Expect = 3e-11
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Frame = +3
Query: 252 QLLGKFELTGIPPAPRGVPQIEVTFD-IDANGILNVSAIEKSTNKENKITITNDKGRLSK 428
+LLGKF+LTG+PPAPRG PQIEVTF+ IDA L +K + + K
Sbjct: 485 RLLGKFDLTGVPPAPRGTPQIEVTFEKIDARNALETYVYNMKNQVSDKDKLADKLEGDEK 544
Query: 429 EEIERMVNEAEKYRNED-DKQKETIQAKM 512
E+IE EA ++ +E+ + +KE K+
Sbjct: 545 EKIEAATKEALEWLDENQNSEKEEYDEKL 573
>At2g32120.2 68415.m03926 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 50.8 bits (116), Expect = 7e-07
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +3
Query: 255 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 362
LLG F+L GIPPAP+GVP+I V DIDA+ L V A
Sbjct: 478 LLGYFKLVGIPPAPKGVPEINVCMDIDASNALRVFA 513
Score = 41.5 bits (93), Expect = 4e-04
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 GAAVQAAILHGDKSEEVQ-DXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFXT 183
GAA++ A+ G D G+ G +I RNT +P ++ F T
Sbjct: 394 GAALEGAVTSGIHDPFGSLDLLTIQATPLAVGVRANGNKFIPVIPRNTMVPARKDLFFTT 453
Query: 184 YSDNQPGVLIQVFEGERAMTKDNN 255
DNQ LI ++EGE ++N+
Sbjct: 454 VQDNQKEALIIIYEGEGETVEENH 477
>At2g32120.1 68415.m03925 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 50.8 bits (116), Expect = 7e-07
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +3
Query: 255 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 362
LLG F+L GIPPAP+GVP+I V DIDA+ L V A
Sbjct: 478 LLGYFKLVGIPPAPKGVPEINVCMDIDASNALRVFA 513
Score = 41.5 bits (93), Expect = 4e-04
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 GAAVQAAILHGDKSEEVQ-DXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTQTFXT 183
GAA++ A+ G D G+ G +I RNT +P ++ F T
Sbjct: 394 GAALEGAVTSGIHDPFGSLDLLTIQATPLAVGVRANGNKFIPVIPRNTMVPARKDLFFTT 453
Query: 184 YSDNQPGVLIQVFEGERAMTKDNN 255
DNQ LI ++EGE ++N+
Sbjct: 454 VQDNQKEALIIIYEGEGETVEENH 477
>At2g44200.1 68415.m05500 expressed protein
Length = 493
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +2
Query: 365 REVHQQ---GEQDHHYQRQRSSLQGRDRAYG**GREVQKRG*QAKGDHPGQNALESYCFS 535
R+ H Q G D HY+R RS L+ + R +KR + H + +++
Sbjct: 214 RKSHHQKTSGTHDRHYERPRSDLEDESKGRESRDRHYEKRRSELDDGHKRRERHDTHYER 273
Query: 536 MKSTMEDEKLKEKISD 583
+S M+DE + + D
Sbjct: 274 RRSEMDDESKRRESRD 289
>At5g61460.1 68418.m07712 structural maintenance of chromosomes
(SMC) family protein very strong similarity to SMC-like
protein (MIM) [Arabidopsis thaliana] GI:5880614;
contains Pfam profile PF02463: RecF/RecN/SMC N terminal
domain
Length = 1057
Score = 32.7 bits (71), Expect = 0.19
Identities = 22/80 (27%), Positives = 40/80 (50%)
Frame = +3
Query: 276 TGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNE 455
T +PP R ++ +FD D L + A K N+ N+ + + EE+E V +
Sbjct: 620 TTLPPLSRRPSRLCASFD-DQIKDLEIEA-SKEQNEINQCMRRKREAEENLEELELKVRQ 677
Query: 456 AEKYRNEDDKQKETIQAKMH 515
+K+R++ +K T + +MH
Sbjct: 678 LKKHRSQAEKVLTTKELEMH 697
>At2g31070.1 68415.m03791 TCP family transcription factor, putative
similar to TCP1 protein (GI:20269127) {Lupinus albus}
and cycloidea (GI:12002867) [Lycopersicon esculentum]
Length = 361
Score = 31.1 bits (67), Expect = 0.57
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 344 YPQRFRYREVHQQGEQDHHYQRQRSSLQGRDRAYG 448
+P FR + HQ HH+Q Q SS+ YG
Sbjct: 289 FPHSFRSWDHHQTTSDHHHHQNQASSMFASSSQYG 323
>At1g79580.3 68414.m09279 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 30.7 bits (66), Expect = 0.75
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 335 CQRYPQRFRYREVHQQGEQDHHYQRQ 412
C+ + ++ +R HQ+ EQDHH+ Q
Sbjct: 161 CRVFKKKNHFRGFHQEQEQDHHHHHQ 186
>At1g79580.2 68414.m09278 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 30.7 bits (66), Expect = 0.75
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 335 CQRYPQRFRYREVHQQGEQDHHYQRQ 412
C+ + ++ +R HQ+ EQDHH+ Q
Sbjct: 161 CRVFKKKNHFRGFHQEQEQDHHHHHQ 186
>At1g79580.1 68414.m09277 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 30.7 bits (66), Expect = 0.75
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 335 CQRYPQRFRYREVHQQGEQDHHYQRQ 412
C+ + ++ +R HQ+ EQDHH+ Q
Sbjct: 161 CRVFKKKNHFRGFHQEQEQDHHHHHQ 186
>At2g01730.1 68415.m00101 metallo-beta-lactamase family protein
simliar to SP|P79101 Cleavage and polyadenylation
specificity factor, 73 kDa subunit (CPSF 73 kDa subunit)
{Bos taurus}; contains Pfam profile PF00753:
Metallo-beta-lactamase superfamily
Length = 613
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 231 LTLKYLDEYSGLVIRVGXECLSLFSGDGSVTL-DECGHDTSSS 106
L+ K L SG I CL + S GS+ L D+C H +SSS
Sbjct: 541 LSAKILKTVSGAQIHESENCLQVASFKGSLCLKDKCMHRSSSS 583
>At1g18860.1 68414.m02348 WRKY family transcription factor contains
Pfam profile: PF03106 WRKY DNA -binding domain
Length = 480
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 423 SKEEIERMVNEAEKYRNEDDKQKETIQ 503
+KEE + V EAE RN DD +K +IQ
Sbjct: 84 NKEEKNKDVEEAEGDRNYDDNEKSSIQ 110
>At1g13190.1 68414.m01529 RNA recognition motif (RRM)-containing
protein
Length = 573
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 275 DRDPTGAAWRASN*GHLRHRCQRYPQRFRYREVHQQGEQDH-HYQRQRSSLQGRDRA 442
+R T W + N G RH+ R ++ +RE QQ ++D + R +SSL+ R R+
Sbjct: 496 ERATTERDW-SENSGDRRHKSHR-EEKDSHREYKQQRDRDSDEFDRGQSSLKSRSRS 550
>At5g25300.1 68418.m03001 F-box family protein PF0064: F-box domain;
similar to F-box protein family, AtFBX7 (GI:20197899)
[Arabidopsis thaliana]
Length = 464
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 348 LNVSAIEKSTNKENKITITNDKGR---LSKEEIERMVNEAEKYRNEDDKQKETIQAKMHW 518
L + ++ + ++ K+ + K ++KE+ + +NE E N++ Q + QAK
Sbjct: 321 LRFADLDSESQQQTKLKFSMLKSEFVDMNKEDSQIEINEKETKINQEHDQSDETQAKRRR 380
Query: 519 NLTAS 533
+LT+S
Sbjct: 381 SLTSS 385
>At4g37090.1 68417.m05254 expressed protein
Length = 186
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 363 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETI 500
+E+ +EN + N KG LSK+ I+ + E EK + E D ++E I
Sbjct: 70 VEEEEPEENSEALAN-KGFLSKDIID-FLAEREKQKAESDSEEEEI 113
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +3
Query: 366 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAK 509
+K +KENK T TN+ +KEE N+ E + E ++KE+ AK
Sbjct: 751 KKKESKENKKTKTNENRVRNKEE-NVQGNKKESEKVEKGEKKESKDAK 797
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 351 NVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE 494
N+ A E+ N ++ TND ++ E N E +NE+ + KE
Sbjct: 559 NIGADEQKKNDKSVEVTTNDGDHTKEKREETQGNNGESVKNENLENKE 606
>At1g03080.1 68414.m00282 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1744
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -3
Query: 168 SLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTVQDSSL 19
++ GD + TLDE + T S+L E + C K + + LL T+ S+L
Sbjct: 1082 TILQGDNNKTLDEKAYLTKSTLQLEEEKC--KLEDDISLLLSETIYQSNL 1129
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +3
Query: 360 AIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKMHWNLTASA* 539
A E+ +E + ++ R +EE+E EA++ R E +K+K ++ K+ L +
Sbjct: 426 AEERKKKEEEEKLRKEEEERRRQEELEAQAEEAKRKRKEKEKEK-LLRKKLEGKLLTAKQ 484
Query: 540 SLPWRMRSSRKRSL 581
+ R + K L
Sbjct: 485 KTEAQKREAFKNQL 498
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +3
Query: 360 AIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKMHWNLTASA* 539
A E+ +E + ++ R +EE+E EA++ R E +K+K ++ K+ L +
Sbjct: 379 AEERKKKEEEEKLRKEEEERRRQEELEAQAEEAKRKRKEKEKEK-LLRKKLEGKLLTAKQ 437
Query: 540 SLPWRMRSSRKRSL 581
+ R + K L
Sbjct: 438 KTEAQKREAFKNQL 451
>At5g40010.1 68418.m04852 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 514
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/53 (22%), Positives = 28/53 (52%)
Frame = +3
Query: 354 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKM 512
+ A+++ + + +K + +EEI+R E +K + E+ ++KE + M
Sbjct: 460 IEALKEEKEEAKRRIEDEEKKKKEEEEIKRKKREEKKIKKEEKEEKEENETTM 512
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +3
Query: 327 DIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE 494
D D G+ K + ENK + R KE +ER+ E E+ ++ + + +
Sbjct: 14 DYDQGGVKTTELERKIEDMENKNQELTRENRELKERLERLTGEIEEMKDVEAEMNQ 69
>At1g25540.1 68414.m03171 phytochrome and flowering time regulatory
protein (PFT1) PMID: 12815435
Length = 836
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +2
Query: 323 LRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSS 421
L+H Q+ Q+ + ++ HQ + HH+Q+Q+ +
Sbjct: 737 LQHHQQQQQQQQQQQQQHQLTQLQHHHQQQQQA 769
>At4g26600.1 68417.m03834 nucleolar protein, putative similar to
SP|P46087 Proliferating-cell nucleolar antigen p120
(Proliferation-associated nucleolar protein p120) {Homo
sapiens}; contains Pfam profile PF01189: NOL1/NOP2/sun
family
Length = 671
Score = 27.1 bits (57), Expect = 9.2
Identities = 22/79 (27%), Positives = 34/79 (43%)
Frame = +3
Query: 285 PPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK 464
PP G P+ E D N N + E K NK T T + G + EE + + +
Sbjct: 587 PPVASGQPKRESNTKEDTNKRKNPRSKEIHKGKRNKNTKT-ESGNV--EEPRKQKKKRSQ 643
Query: 465 YRNEDDKQKETIQAKMHWN 521
++NE + +E + M N
Sbjct: 644 WKNEIAQAREEKRKTMREN 662
>At4g16860.1 68417.m02547 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1147
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = -3
Query: 222 KYLDEYSGLVIRVGXECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRL 43
KYL E L + + E L LF + VTL + + +N + + C K + L L
Sbjct: 778 KYLKEIPDLSLAINLERLYLFGCESLVTLPSSIQNATKLINLDMRDCK-KLESFPTDLNL 836
Query: 42 VTVQDSSLDSC 10
+++ +L C
Sbjct: 837 ESLEYLNLTGC 847
>At2g24420.2 68415.m02918 DNA repair ATPase-related contains 2
transmembrane domains; similar to DNA double-strand
break repair rad50 ATPase. (Swiss-Prot:O33600)
[Sulfolobus acidocaldarius]
Length = 440
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/52 (25%), Positives = 31/52 (59%)
Frame = +3
Query: 354 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAK 509
VS++ K + ++ ++ + R + E+E+ V +K+ + +K+KE I+A+
Sbjct: 95 VSSLRKKGSSDSVELLSKAQARAT--ELEKQVEVLKKFLEQKNKEKELIEAQ 144
>At2g24420.1 68415.m02917 DNA repair ATPase-related contains 2
transmembrane domains; similar to DNA double-strand
break repair rad50 ATPase. (Swiss-Prot:O33600)
[Sulfolobus acidocaldarius]
Length = 440
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/52 (25%), Positives = 31/52 (59%)
Frame = +3
Query: 354 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAK 509
VS++ K + ++ ++ + R + E+E+ V +K+ + +K+KE I+A+
Sbjct: 95 VSSLRKKGSSDSVELLSKAQARAT--ELEKQVEVLKKFLEQKNKEKELIEAQ 144
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,601,844
Number of Sequences: 28952
Number of extensions: 215710
Number of successful extensions: 916
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1151426952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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