Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30544
         (392 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   1.3  
AJ420785-3|CAD12783.1|  380|Anopheles gambiae serpin protein.          23   4.0  
AJ271353-1|CAB69785.1|  380|Anopheles gambiae putative serine pr...    23   4.0  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    22   7.0  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    22   7.0  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    22   7.0  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 285 FILVSLVWTYNKNTYVQIQIKFNSQNIFDV 374
           FI +  +  Y +N + QIQ   N   +FD+
Sbjct: 656 FIALEKIQQYERNCHTQIQTPENVPRLFDL 685


>AJ420785-3|CAD12783.1|  380|Anopheles gambiae serpin protein.
          Length = 380

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 5/18 (27%), Positives = 13/18 (72%)
 Frame = -3

Query: 261 LDFPVIYIINEEMLIYYV 208
           +D P +Y++  + ++Y+V
Sbjct: 355 VDHPFLYVLRHQQMVYFV 372


>AJ271353-1|CAB69785.1|  380|Anopheles gambiae putative serine
           protease inhibitor protein.
          Length = 380

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 5/18 (27%), Positives = 13/18 (72%)
 Frame = -3

Query: 261 LDFPVIYIINEEMLIYYV 208
           +D P +Y++  + ++Y+V
Sbjct: 355 VDHPFLYVLRHQQMVYFV 372


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 274 GQPWPRFSSNLH 239
           G PWPR++  +H
Sbjct: 589 GNPWPRWTGVMH 600


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 274 GQPWPRFSSNLH 239
           G PWPR++  +H
Sbjct: 589 GNPWPRWTGVMH 600


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 274 GQPWPRFSSNLH 239
           G PWPR++  +H
Sbjct: 475 GNPWPRWTGVMH 486


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 286,744
Number of Sequences: 2352
Number of extensions: 4473
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30784536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)