Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30538
         (732 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_07_0071 - 12597668-12597784,12597966-12598166,12598804-12599601     29   5.0  
10_02_0168 + 6134515-6134887,6135925-6135957,6136539-6136714           28   8.8  
02_05_0581 - 30122279-30123124                                         28   8.8  
01_03_0107 - 12613491-12613538,12613906-12614139,12614682-126147...    28   8.8  

>10_07_0071 - 12597668-12597784,12597966-12598166,12598804-12599601
          Length = 371

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 525 CCLLFCVHRIFDVHCVFLTFRFPNTSISVSQSDTDVSVPLH 403
           C LL     ++DV  VF + RF   ++ VS +    S P+H
Sbjct: 175 CALLLVCLFVYDVFWVFFSERFFGANVMVSVATQKASNPVH 215


>10_02_0168 + 6134515-6134887,6135925-6135957,6136539-6136714
          Length = 193

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -2

Query: 293 PLRVPSPRIGPCLVHLFYCKSSENSSQM 210
           P  VP P I PCL  L  C S  + S M
Sbjct: 34  PADVPQPEIPPCLNDLMPCASVYDDSSM 61


>02_05_0581 - 30122279-30123124
          Length = 281

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 18/68 (26%), Positives = 30/68 (44%)
 Frame = +2

Query: 197 NVGGSFASYSRNSYSRIGVQDRDQFAGLVREVAAPDVGRMGIEILSFTIKDVYDDVQYLA 376
           + GGS+   SR+ Y R     RD++  L R    PD  +      +       DD +Y+ 
Sbjct: 172 HTGGSWRKISRSVYGRTSAIMRDRWIQLRRSGLVPDAAKTAEN--AGCPPPAADDSEYMG 229

Query: 377 SLGKSQTP 400
           S  + ++P
Sbjct: 230 SEAELKSP 237


>01_03_0107 -
           12613491-12613538,12613906-12614139,12614682-12614713,
           12616021-12616176,12617972-12618159,12618242-12618324,
           12618821-12618976,12620320-12621162,12621197-12621550,
           12621962-12623125
          Length = 1085

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 213 LRAILGTLTVE*VYKTGTNSRAWYAKWL 296
           L  ILGTL +  ++ +G   R+W+A +L
Sbjct: 419 LICILGTLEIPDIFSSGVVCRSWHASYL 446


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,904,354
Number of Sequences: 37544
Number of extensions: 409870
Number of successful extensions: 1212
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)