Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30537
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   146   8e-37
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   2.2  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    25   2.9  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   5.1  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  146 bits (353), Expect = 8e-37
 Identities = 68/99 (68%), Positives = 81/99 (81%)
 Frame = +1

Query: 211 IEGKSFRSFPG*STSDTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 390
           ++G+ F        ++ DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MV KWQ
Sbjct: 62  LKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQ 121

Query: 391 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQ 507
           TLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQ
Sbjct: 122 TLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQ 160



 Score =  105 bits (252), Expect = 1e-24
 Identities = 48/55 (87%), Positives = 51/55 (92%)
 Frame = +2

Query: 89  IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQ 253
           +VDPFTRKDWYDVKAP+MF  RQ G TLVNRTQGTKIAS+GLKGRVFEVSLADLQ
Sbjct: 21  VVDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFEVSLADLQ 75



 Score = 75.8 bits (178), Expect = 1e-15
 Identities = 35/58 (60%), Positives = 46/58 (79%)
 Frame = +3

Query: 510 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRK*K 683
           +Q++ IR KM  II R++T+++L+ VV KL+PDSIAKDIEKAC  +YPL DV IRK K
Sbjct: 162 SQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVK 219


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +1

Query: 463 TNKDSLSQRKTCYAQPLRSEQSERKCVKSLHATSL--TLNSGRW*TS*FLTPLPRTSRRP 636
           ++ +++S +    A+P  SE S+ +CV+      +  T+N+ R  +   +TP      +P
Sbjct: 755 SSSEAVSSKLPPTAEPEHSESSDVECVERTERLKVKTTINTSRIPSMCIITPTNSDDEQP 814

Query: 637 AMAS 648
              S
Sbjct: 815 PAGS 818


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = +1

Query: 181 YPGNENCFGRIEGKSFRSFPG*STSDTDAERSF 279
           YPG EN       KS R  P      TD E SF
Sbjct: 124 YPGEENVIKVYSSKSLRKSP--QAHTTDDESSF 154



 Score = 23.0 bits (47), Expect = 9.0
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 305 YSAINLNLRKDLSASVSLVDQPGKLRKLFPSIL 207
           Y   N NLRKDL  +V ++   G +  L P IL
Sbjct: 174 YYGTNGNLRKDLGGNVIVI---GAVFALAPQIL 203


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -1

Query: 677 LSDANIAQRVDAMAGLLDVLGNGVRNQLV 591
           L+ AN  QR++    L D++G+  RN+++
Sbjct: 560 LAIANALQRINTPKYLYDIIGDYFRNRVL 588


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 740,957
Number of Sequences: 2352
Number of extensions: 15851
Number of successful extensions: 79
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)