Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30533
         (855 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0024 + 25014274-25014375,25014655-25014720,25015117-250152...   109   4e-24
03_05_1094 - 30348366-30348467,30348571-30348753,30348833-303489...    29   3.6  
12_02_0129 - 13981684-13982529                                         29   6.2  
12_02_0112 + 13783758-13784717                                         29   6.2  
08_01_0414 + 3684491-3684589,3684770-3684838,3685004-3685033,368...    29   6.2  
11_04_0307 + 16185405-16185713,16185847-16185942,16186626-161867...    28   8.3  

>05_06_0024 +
           25014274-25014375,25014655-25014720,25015117-25015233,
           25015757-25015834,25015911-25016016,25016150-25016196,
           25016386-25016463,25016898-25016963,25017102-25017165,
           25017406-25017428
          Length = 248

 Score =  109 bits (261), Expect = 4e-24
 Identities = 47/93 (50%), Positives = 67/93 (72%)
 Frame = +2

Query: 212 KESRXFVGHLP*RSQRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFY 391
           K+    + H P   ++  +IP+LDLAQ+Q GGW+P++AM+ +A+I+ +  +RVYEVATFY
Sbjct: 55  KKVNEILSHYPSNYKQSGIIPMLDLAQQQHGGWVPVAAMNAIAKIVEVAPIRVYEVATFY 114

Query: 392 TMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAI 490
           TMF R  +GKYH+ VC TTPC +RGS  I  A+
Sbjct: 115 TMFNRTKVGKYHLLVCGTTPCMIRGSREIEEAL 147



 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 35/79 (44%), Positives = 44/79 (55%), Gaps = 11/79 (13%)
 Frame = +1

Query: 532 GKFSVSEVECLGACVNAPMIQVND----------DYYEDLSVEDTKEIISKLKKDEKPKP 681
           G FSV E+EC+G CVNAPMI V D          +YYEDL+ +   EI+  LK+ E P  
Sbjct: 162 GLFSVGEMECMGCCVNAPMIAVADYSKGSEGYTYNYYEDLTPKRVVEIVEMLKRGETPPR 221

Query: 682 GPR-SGRFASEPLGGLTSL 735
           G +   R    P GG T+L
Sbjct: 222 GTQHPERKNCGPAGGNTTL 240



 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 21/64 (32%), Positives = 39/64 (60%)
 Frame = +3

Query: 69  RTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEXLLAIYPE 248
           R   + L  +++ S   +A+ +  S   H D+PE+NP +P+EF++AN K+V  +L+ YP 
Sbjct: 7   RLAARRLLGLATSSASESAAARRLSRSPHLDSPENNPDMPWEFTEANMKKVNEILSHYPS 66

Query: 249 GHSE 260
            + +
Sbjct: 67  NYKQ 70


>03_05_1094 - 30348366-30348467,30348571-30348753,30348833-30348934,
            30349617-30349967,30350049-30350276,30350353-30350509,
            30351189-30351370,30351443-30351866,30351949-30352892,
            30353509-30353773,30354558-30355120
          Length = 1166

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 413  IGKYHVQVCTTTPCWLRGSDAILNAIKQETNCRLEATV 526
            +G Y   VC  TPCW+  +  +L A++ +    LE  +
Sbjct: 1007 LGTYPPNVCVGTPCWM--APEVLRAMRDKNQYGLEVDI 1042


>12_02_0129 - 13981684-13982529
          Length = 281

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 93  RISSRSIQTTASRQHDSLFVHRDTPEDN 176
           R++ R + + A R HD+  +HRD   DN
Sbjct: 81  RVAMRQLLSGAKRMHDAGLMHRDLKPDN 108


>12_02_0112 + 13783758-13784717
          Length = 319

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 93  RISSRSIQTTASRQHDSLFVHRDTPEDN 176
           R++ R + + A R HD+  +HRD   DN
Sbjct: 119 RVAMRQLLSGAKRMHDAGLMHRDLKPDN 146


>08_01_0414 +
           3684491-3684589,3684770-3684838,3685004-3685033,
           3685540-3685596,3685884-3685954,3686185-3686266,
           3686470-3686559,3686647-3686685
          Length = 178

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = +1

Query: 622 SVEDTKEIISKLKKDE 669
           ++EDTK++ISK KKDE
Sbjct: 111 NIEDTKQMISKAKKDE 126


>11_04_0307 +
           16185405-16185713,16185847-16185942,16186626-16186730,
           16186938-16187090,16188395-16188478,16188566-16188694,
           16188986-16189165,16189555-16189677,16189678-16189794,
           16189889-16190053
          Length = 486

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
 Frame = +3

Query: 150 VHRDTPEDNPSIPFEFSQANQKRVEXLLAI---------YPEGHSEVP*FLYWIWHND 296
           + RD    +P +PF  ++ANQ+ +  +L I         Y +G +EV   L++++ ND
Sbjct: 229 IDRDVKRTHPEMPFFSAKANQESLRRVLIIFSKLNPTIRYVQGMNEVLAPLFYVFKND 286


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,863,482
Number of Sequences: 37544
Number of extensions: 515219
Number of successful extensions: 1332
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1331
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)