Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30533
         (855 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075322-1|AAL68189.2|  269|Drosophila melanogaster GH08937p pro...   147   2e-35
AE014298-2589|AAF48745.1|  242|Drosophila melanogaster CG5703-PA...   147   2e-35
AY089390-1|AAL90128.1|  238|Drosophila melanogaster AT21479p pro...    99   7e-21
AE014296-2883|AAF49361.1|  238|Drosophila melanogaster CG6485-PA...    99   7e-21
AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc fin...    31   2.0  
AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB, ...    31   2.0  
AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA, ...    31   2.0  
AY061479-1|AAL29027.1|  546|Drosophila melanogaster LD44506p pro...    31   2.7  
AE014297-2927|AAF55847.2|  546|Drosophila melanogaster CG5745-PA...    31   2.7  
BT025847-1|ABF85747.1|  268|Drosophila melanogaster IP14615p pro...    30   4.7  
AE014297-896|AAN13413.1|  178|Drosophila melanogaster CG12952-PB...    30   4.7  
AE014297-895|AAF54351.1|  268|Drosophila melanogaster CG12952-PA...    30   4.7  
AE013599-2559|AAF57791.1|  649|Drosophila melanogaster CG18635-P...    30   4.7  

>AY075322-1|AAL68189.2|  269|Drosophila melanogaster GH08937p
           protein.
          Length = 269

 Score =  147 bits (356), Expect = 2e-35
 Identities = 70/100 (70%), Positives = 77/100 (77%)
 Frame = +2

Query: 200 AGQSKESRXFVGHLP*RSQRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEV 379
           A   K     +   P   +RGAMIPLLDLAQRQ G WLPISAMHKVAEIL LP MRVYEV
Sbjct: 77  AENKKRVEAILSIYPEGHKRGAMIPLLDLAQRQYG-WLPISAMHKVAEILQLPNMRVYEV 135

Query: 380 ATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQE 499
           ATFYTMF+R+P GKYH+QVCTTTPCWLRGSD IL   K++
Sbjct: 136 ATFYTMFMRKPTGKYHIQVCTTTPCWLRGSDDILETCKKQ 175



 Score =  120 bits (288), Expect = 3e-27
 Identities = 53/84 (63%), Positives = 67/84 (79%)
 Frame = +1

Query: 511 VGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPR 690
           VG  +   KF++SEVECLGACVNAPM+ +NDDYYEDL+ +D ++I++ LK D+   PGPR
Sbjct: 180 VGDTTKDRKFTISEVECLGACVNAPMVAINDDYYEDLTSKDMQDILNDLKADKISPPGPR 239

Query: 691 SGRFASEPLGGLTSLTEEPTGPGF 762
           +GRFASEP G  TSL+EEP GPGF
Sbjct: 240 NGRFASEPKGEPTSLSEEPKGPGF 263



 Score = 84.6 bits (200), Expect = 2e-16
 Identities = 37/68 (54%), Positives = 52/68 (76%)
 Frame = +3

Query: 51  KMLSSLRTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEXL 230
           +ML++  +      R + R+I T+++R  D+LFVHRDTPEDNP+IPFEF+  N+KRVE +
Sbjct: 27  RMLTNCASKTLAAVRANIRAIATSSARASDNLFVHRDTPEDNPNIPFEFTAENKKRVEAI 86

Query: 231 LAIYPEGH 254
           L+IYPEGH
Sbjct: 87  LSIYPEGH 94


>AE014298-2589|AAF48745.1|  242|Drosophila melanogaster CG5703-PA
           protein.
          Length = 242

 Score =  147 bits (356), Expect = 2e-35
 Identities = 70/100 (70%), Positives = 77/100 (77%)
 Frame = +2

Query: 200 AGQSKESRXFVGHLP*RSQRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEV 379
           A   K     +   P   +RGAMIPLLDLAQRQ G WLPISAMHKVAEIL LP MRVYEV
Sbjct: 50  AENKKRVEAILSIYPEGHKRGAMIPLLDLAQRQYG-WLPISAMHKVAEILQLPNMRVYEV 108

Query: 380 ATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQE 499
           ATFYTMF+R+P GKYH+QVCTTTPCWLRGSD IL   K++
Sbjct: 109 ATFYTMFMRKPTGKYHIQVCTTTPCWLRGSDDILETCKKQ 148



 Score =  120 bits (288), Expect = 3e-27
 Identities = 53/84 (63%), Positives = 67/84 (79%)
 Frame = +1

Query: 511 VGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPR 690
           VG  +   KF++SEVECLGACVNAPM+ +NDDYYEDL+ +D ++I++ LK D+   PGPR
Sbjct: 153 VGDTTKDRKFTISEVECLGACVNAPMVAINDDYYEDLTSKDMQDILNDLKADKISPPGPR 212

Query: 691 SGRFASEPLGGLTSLTEEPTGPGF 762
           +GRFASEP G  TSL+EEP GPGF
Sbjct: 213 NGRFASEPKGEPTSLSEEPKGPGF 236



 Score = 83.8 bits (198), Expect = 3e-16
 Identities = 37/67 (55%), Positives = 51/67 (76%)
 Frame = +3

Query: 54  MLSSLRTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEXLL 233
           ML++  +      R + R+I T+++R  D+LFVHRDTPEDNP+IPFEF+  N+KRVE +L
Sbjct: 1   MLTNCASKTLAAVRANIRAIATSSARASDNLFVHRDTPEDNPNIPFEFTAENKKRVEAIL 60

Query: 234 AIYPEGH 254
           +IYPEGH
Sbjct: 61  SIYPEGH 67


>AY089390-1|AAL90128.1|  238|Drosophila melanogaster AT21479p
           protein.
          Length = 238

 Score = 99.1 bits (236), Expect = 7e-21
 Identities = 46/83 (55%), Positives = 57/83 (68%)
 Frame = +2

Query: 257 RGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 436
           +GA++PLLD+AQRQ G WL ISA+  VAE + +  M  +E A FYTMF  +P GKY V V
Sbjct: 57  KGALLPLLDIAQRQQG-WLSISAVQAVAETIKIDPMEAFEAAQFYTMFFMKPRGKYVVSV 115

Query: 437 CTTTPCWLRGSDAILNAIKQETN 505
           CT+TPC LRG D I  A K+  N
Sbjct: 116 CTSTPCKLRGGDEIFEACKKTLN 138



 Score = 97.1 bits (231), Expect = 3e-20
 Identities = 43/83 (51%), Positives = 58/83 (69%)
 Frame = +1

Query: 514 GGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRS 693
           G  +P  +F++ E  C+GACVNAP++ VNDD YEDL  +    I++ L+ D+ P  GPR+
Sbjct: 142 GQTTPDMQFTLKEDYCMGACVNAPVLAVNDDMYEDLDEKSLANILADLRNDKLPPAGPRN 201

Query: 694 GRFASEPLGGLTSLTEEPTGPGF 762
           GRFASEP GGLT+L  +P  PGF
Sbjct: 202 GRFASEPKGGLTTLKIQPPPPGF 224



 Score = 32.3 bits (70), Expect = 0.87
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = +3

Query: 168 EDNPSIPFEFSQANQKRVEXLLAIYPE 248
           E   ++ FEFS+ NQ+RV+ LLA YP+
Sbjct: 27  EIRKALKFEFSKDNQRRVKALLAWYPQ 53


>AE014296-2883|AAF49361.1|  238|Drosophila melanogaster CG6485-PA
           protein.
          Length = 238

 Score = 99.1 bits (236), Expect = 7e-21
 Identities = 46/83 (55%), Positives = 57/83 (68%)
 Frame = +2

Query: 257 RGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 436
           +GA++PLLD+AQRQ G WL ISA+  VAE + +  M  +E A FYTMF  +P GKY V V
Sbjct: 57  KGALLPLLDIAQRQQG-WLSISAVQAVAETIKIDPMEAFEAAQFYTMFFMKPRGKYVVSV 115

Query: 437 CTTTPCWLRGSDAILNAIKQETN 505
           CT+TPC LRG D I  A K+  N
Sbjct: 116 CTSTPCKLRGGDEIFEACKKTLN 138



 Score = 97.1 bits (231), Expect = 3e-20
 Identities = 43/83 (51%), Positives = 58/83 (69%)
 Frame = +1

Query: 514 GGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRS 693
           G  +P  +F++ E  C+GACVNAP++ VNDD YEDL  +    I++ L+ D+ P  GPR+
Sbjct: 142 GQTTPDMQFTLKEDYCMGACVNAPVLAVNDDMYEDLDEKSLANILADLRNDKLPPAGPRN 201

Query: 694 GRFASEPLGGLTSLTEEPTGPGF 762
           GRFASEP GGLT+L  +P  PGF
Sbjct: 202 GRFASEPKGGLTTLKIQPPPPGF 224



 Score = 32.3 bits (70), Expect = 0.87
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = +3

Query: 168 EDNPSIPFEFSQANQKRVEXLLAIYPE 248
           E   ++ FEFS+ NQ+RV+ LLA YP+
Sbjct: 27  EIRKALKFEFSKDNQRRVKALLAWYPQ 53


>AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc finger
           protein rhinoceros protein.
          Length = 3241

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +1

Query: 658 KKDEKPKPGPRSGRFASEPLGGLTSLTEEPTGPGFEYKTHSRRKSGVVLCK 810
           +KD +P+P P   R    P G  T+   E TG G    T S R   + LCK
Sbjct: 25  RKDVEPQPPPTKRRKGRPPNGATTAAVAEVTGSG--PATGSERVPVLPLCK 73


>AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB,
           isoform B protein.
          Length = 3241

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +1

Query: 658 KKDEKPKPGPRSGRFASEPLGGLTSLTEEPTGPGFEYKTHSRRKSGVVLCK 810
           +KD +P+P P   R    P G  T+   E TG G    T S R   + LCK
Sbjct: 25  RKDVEPQPPPTKRRKGRPPNGATTAAVAEVTGSG--PATGSERVPVLPLCK 73


>AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA,
           isoform A protein.
          Length = 3201

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +1

Query: 658 KKDEKPKPGPRSGRFASEPLGGLTSLTEEPTGPGFEYKTHSRRKSGVVLCK 810
           +KD +P+P P   R    P G  T+   E TG G    T S R   + LCK
Sbjct: 25  RKDVEPQPPPTKRRKGRPPNGATTAAVAEVTGSG--PATGSERVPVLPLCK 73


>AY061479-1|AAL29027.1|  546|Drosophila melanogaster LD44506p
           protein.
          Length = 546

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 21/67 (31%), Positives = 28/67 (41%)
 Frame = +3

Query: 54  MLSSLRTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEXLL 233
           +L S R G Q L     R      ++Q     +H D P  NP IP    Q  Q+  E +L
Sbjct: 273 VLESKRQGYQDLRHNYFRVDSQDETQQDTYRQIHIDVPRMNPQIPLFQQQLVQEMFERIL 332

Query: 234 AIYPEGH 254
            I+   H
Sbjct: 333 FIWAIRH 339


>AE014297-2927|AAF55847.2|  546|Drosophila melanogaster CG5745-PA
           protein.
          Length = 546

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 21/67 (31%), Positives = 28/67 (41%)
 Frame = +3

Query: 54  MLSSLRTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEXLL 233
           +L S R G Q L     R      ++Q     +H D P  NP IP    Q  Q+  E +L
Sbjct: 273 VLESKRQGYQDLRHNYFRVDSQDETQQDTYRQIHIDVPRMNPQIPLFQQQLVQEMFERIL 332

Query: 234 AIYPEGH 254
            I+   H
Sbjct: 333 FIWAIRH 339


>BT025847-1|ABF85747.1|  268|Drosophila melanogaster IP14615p
           protein.
          Length = 268

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -2

Query: 548 ETENFPQGLLPPTYSLFPV*LHSIWH 471
           E E    GLLPPTYS+ P  + S+WH
Sbjct: 95  EKEAHNMGLLPPTYSVIPQPV-SMWH 119


>AE014297-896|AAN13413.1|  178|Drosophila melanogaster CG12952-PB,
           isoform B protein.
          Length = 178

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -2

Query: 548 ETENFPQGLLPPTYSLFPV*LHSIWH 471
           E E    GLLPPTYS+ P  + S+WH
Sbjct: 5   EKEAHNMGLLPPTYSVIPQPV-SMWH 29


>AE014297-895|AAF54351.1|  268|Drosophila melanogaster CG12952-PA,
           isoform A protein.
          Length = 268

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -2

Query: 548 ETENFPQGLLPPTYSLFPV*LHSIWH 471
           E E    GLLPPTYS+ P  + S+WH
Sbjct: 95  EKEAHNMGLLPPTYSVIPQPV-SMWH 119


>AE013599-2559|AAF57791.1|  649|Drosophila melanogaster CG18635-PA
           protein.
          Length = 649

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
 Frame = +1

Query: 610 YEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSLTEEPTGPGFE--YKTHSR 783
           YEDL   DT E++  + +   P P P++   A   L  L    E+P  P        +  
Sbjct: 334 YEDLGDLDTIEVLDSIPETPAPPPPPKT---APPELPVLKPTEEDPPTPDLRRTLSDNEH 390

Query: 784 RKSGVV---LCK*EFFKXIMLV 840
           RKS  V   L + E FK ++LV
Sbjct: 391 RKSRRVTRPLSQLETFKDMLLV 412


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,846,546
Number of Sequences: 53049
Number of extensions: 880740
Number of successful extensions: 2464
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2460
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)