Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30533
         (855 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77663-9|CAB01203.1|  239|Caenorhabditis elegans Hypothetical pr...   122   2e-28
AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPas...    30   2.4  
U00033-15|AAC48298.2|  434|Caenorhabditis elegans Hypothetical p...    29   3.2  
AC087794-4|AAG53704.1|  275|Caenorhabditis elegans Hypothetical ...    28   9.7  

>Z77663-9|CAB01203.1|  239|Caenorhabditis elegans Hypothetical
           protein F53F4.10 protein.
          Length = 239

 Score =  122 bits (295), Expect = 2e-28
 Identities = 55/80 (68%), Positives = 68/80 (85%)
 Frame = +2

Query: 260 GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVC 439
           GA+IPLLDLAQRQ G WLPISAMH+VA+IL +P+MR YEVATFYTMF R+P+GKY +QVC
Sbjct: 66  GALIPLLDLAQRQHG-WLPISAMHEVAKILEVPRMRAYEVATFYTMFNRQPVGKYFLQVC 124

Query: 440 TTTPCWLRGSDAILNAIKQE 499
            TTPC LRG++ I   I+++
Sbjct: 125 ATTPCMLRGAETITETIEKK 144



 Score =  116 bits (279), Expect = 2e-26
 Identities = 52/83 (62%), Positives = 62/83 (74%)
 Frame = +1

Query: 514 GGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRS 693
           G  +  G F+++EVECLGACVNAPMIQ+NDDY+EDL+ +D  EI+  LK   KP  GPRS
Sbjct: 150 GETTKDGLFTLAEVECLGACVNAPMIQINDDYFEDLTPKDVNEILDDLKAGRKPAAGPRS 209

Query: 694 GRFASEPLGGLTSLTEEPTGPGF 762
           GR A+EP G LTSL E P GPGF
Sbjct: 210 GRLAAEPFGELTSLKETPPGPGF 232



 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 19/37 (51%), Positives = 29/37 (78%)
 Frame = +3

Query: 144 LFVHRDTPEDNPSIPFEFSQANQKRVEXLLAIYPEGH 254
           L VHRDT E+N ++ F+F+  NQ+R++ ++ IYPEGH
Sbjct: 27  LMVHRDTKENNLNVKFKFTSENQERIKAIMDIYPEGH 63


>AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPase
           protein.
          Length = 1237

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -2

Query: 440 YILGHGIYQLVVL*TL 393
           YILGH +YQLV+L TL
Sbjct: 899 YILGHAVYQLVILFTL 914


>U00033-15|AAC48298.2|  434|Caenorhabditis elegans Hypothetical
           protein F37C12.13a protein.
          Length = 434

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +2

Query: 410 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCRLEATVLV 532
           P+  YH+ +CTT     +G   +++   +ET C L+ +++V
Sbjct: 184 PLNIYHMPICTTIGLLDKGQIVVIDPTDKETAC-LDGSIVV 223


>AC087794-4|AAG53704.1|  275|Caenorhabditis elegans Hypothetical
           protein Y32G9A.5 protein.
          Length = 275

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 76  EYRACGVYPLGQFRPQHQGNMTVYLST 156
           +Y     YPLG   PQ+ GN   + ST
Sbjct: 227 QYLGSSQYPLGSDAPQYPGNYNAFAST 253


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,355,655
Number of Sequences: 27780
Number of extensions: 442540
Number of successful extensions: 1262
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1261
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)