Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30532
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   3.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   3.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   6.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.7  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   8.8  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 430 RVMTSLPQKKRNTFHLSSAKPIRRQSR 510
           R++ +LP K +   HL   K IR + R
Sbjct: 96  RLVWTLPGKTKMIAHLKDKKKIRAKKR 122


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 430 RVMTSLPQKKRNTFHLSSAKPIRRQSR 510
           R++ +LP K +   HL   K IR + R
Sbjct: 410 RLVWTLPGKTKMIAHLKDKKKIRAKKR 436


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 430 RVMTSLPQKKRNTFHLSSAKPIRRQSR 510
           R++ +LP K +   HL   K IR + R
Sbjct: 643 RLVWTLPGKTKMIAHLKDKKKIRAKKR 669


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 430 RVMTSLPQKKRNTFHLSSAKPIRRQSR 510
           R++ +LP K +   HL   K IR + R
Sbjct: 643 RLVWTLPGKTKMIAHLKDKKKIRAKKR 669


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 552 CSADTSKRPSDSARANIP 605
           CSAD ++ P     AN+P
Sbjct: 167 CSADGTRIPGQLEPANVP 184


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 552 CSADTSKRPSDSARANIP 605
           CSAD ++ P     AN+P
Sbjct: 174 CSADGTRIPGQLEPANVP 191


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/19 (36%), Positives = 8/19 (42%)
 Frame = +3

Query: 225 TCWNSAQRSALVTGPFAFN 281
           TCWN      L  G   +N
Sbjct: 117 TCWNGTATEQLCIGGLLYN 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,262
Number of Sequences: 336
Number of extensions: 3612
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)