Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30532
(652 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g18540.1 68414.m02313 60S ribosomal protein L6 (RPL6A) simila... 65 3e-11
At1g74060.1 68414.m08578 60S ribosomal protein L6 (RPL6B) simila... 63 2e-10
At1g74050.1 68414.m08576 60S ribosomal protein L6 (RPL6C) simila... 63 2e-10
At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly id... 33 0.12
At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly id... 33 0.12
At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly id... 33 0.12
At1g29790.1 68414.m03642 expressed protein 32 0.29
At5g64200.2 68418.m08063 arginine/serine-rich splicing factor SC... 32 0.38
At5g64200.1 68418.m08062 arginine/serine-rich splicing factor SC... 32 0.38
At4g21900.1 68417.m03166 MATE efflux family protein similar to r... 30 1.2
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 30 1.5
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 30 1.5
At1g06660.1 68414.m00706 expressed protein 30 1.5
At3g57070.1 68416.m06354 glutaredoxin family protein contains Pf... 29 2.7
At1g78120.1 68414.m09104 tetratricopeptide repeat (TPR)-containi... 29 3.5
At1g53645.1 68414.m06102 hydroxyproline-rich glycoprotein family... 29 3.5
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 28 6.2
At4g23130.2 68417.m03334 receptor-like protein kinase 6 (RLK6) i... 27 8.2
At4g23130.1 68417.m03333 receptor-like protein kinase 6 (RLK6) i... 27 8.2
At3g16520.3 68416.m02110 UDP-glucoronosyl/UDP-glucosyl transfera... 27 8.2
At3g16520.2 68416.m02109 UDP-glucoronosyl/UDP-glucosyl transfera... 27 8.2
At3g16520.1 68416.m02108 UDP-glucoronosyl/UDP-glucosyl transfera... 27 8.2
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 27 8.2
>At1g18540.1 68414.m02313 60S ribosomal protein L6 (RPL6A) similar
to 60S ribosomal protein L6 GI:7208784 from [Cicer
arietinum]
Length = 233
Score = 65.3 bits (152), Expect = 3e-11
Identities = 40/96 (41%), Positives = 50/96 (52%)
Frame = +3
Query: 255 LVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEG 434
LVTGPF N PLRR+ Q YVIGTST+I + K F+D YF EG
Sbjct: 119 LVTGPFKINGVPLRRVNQAYVIGTSTKIDISGVNTEK-FDDKYF---GKVAEKKKKKTEG 174
Query: 435 DDIFATKKEKYVPSEQRKTDQKTVERL*SKPSEPDP 542
+ A K+EK +++K DQKTV+ K E P
Sbjct: 175 EFFEAEKEEKKEIPQEKKEDQKTVDAALIKSIEAVP 210
Score = 30.7 bits (66), Expect = 0.88
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +1
Query: 64 PLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRV 222
P+++ FYP ++ + R K + ++ ++ GTV I+LAGR GKRV
Sbjct: 57 PVEKPAKFYPAED-VKKPLVNRRKPKPTK-LKASITPGTVLIILAGRFKGKRV 107
>At1g74060.1 68414.m08578 60S ribosomal protein L6 (RPL6B) similar
to 60S ribosomal protein L6 (YL 16 like) GB:CAB57309
from [Cyanophora paradoxa]
Length = 233
Score = 62.9 bits (146), Expect = 2e-10
Identities = 39/96 (40%), Positives = 49/96 (51%)
Frame = +3
Query: 255 LVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEG 434
LVTGPF N PLRR+ Q YVIGTST++ + L K F+D YF EG
Sbjct: 119 LVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDK-FDDKYF---GKVAEKKKKKTEG 174
Query: 435 DDIFATKKEKYVPSEQRKTDQKTVERL*SKPSEPDP 542
+ A K+EK + +K DQK V+ K E P
Sbjct: 175 EFFEAEKEEKKEIPQGKKDDQKAVDAALIKAIEAVP 210
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +1
Query: 64 PLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRV 222
P+++ FYP ++ + R +K + +R ++ GTV I+LAGR GKRV
Sbjct: 57 PVEKPPKFYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRV 107
>At1g74050.1 68414.m08576 60S ribosomal protein L6 (RPL6C) similar
to 60S ribosomal protein L6 (YL 16 like) GB:CAB57309
from [Cyanophora paradoxa]
Length = 233
Score = 62.9 bits (146), Expect = 2e-10
Identities = 39/96 (40%), Positives = 49/96 (51%)
Frame = +3
Query: 255 LVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEG 434
LVTGPF N PLRR+ Q YVIGTST++ + L K F+D YF EG
Sbjct: 119 LVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDK-FDDKYF---GKVAEKKKKKTEG 174
Query: 435 DDIFATKKEKYVPSEQRKTDQKTVERL*SKPSEPDP 542
+ A K+EK + +K DQK V+ K E P
Sbjct: 175 EFFEAEKEEKKEIPQVKKDDQKAVDAALIKAIEAVP 210
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +1
Query: 64 PLKRRKSFYPTQEKICASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRV 222
P+++ FYP ++ + R +K + +R ++ GTV I+LAGR GKRV
Sbjct: 57 PVEKPPKFYPAED-VKKPLPNRRTAKPTK-LRASITPGTVLIILAGRFKGKRV 107
>At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 249
Score = 33.5 bits (73), Expect = 0.12
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 355 NCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQK-KRNTFHLSSAKPIRRQSRGCDQSHR 531
NC+N+ + S S V+S + R S + R+ + S P+RR+ R ++ R
Sbjct: 94 NCKNSPKKLRRSGSYSRSPVRSRSPRRRRSPSRSLSRSRSYSRSRSPVRRRERSVEERSR 153
Query: 532 SPTRQEGAPRIPQSGLRTPL 591
SP R + + P++ R+P+
Sbjct: 154 SPKRMDDS-LSPRARDRSPV 172
>At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 260
Score = 33.5 bits (73), Expect = 0.12
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 355 NCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQK-KRNTFHLSSAKPIRRQSRGCDQSHR 531
NC+N+ + S S V+S + R S + R+ + S P+RR+ R ++ R
Sbjct: 105 NCKNSPKKLRRSGSYSRSPVRSRSPRRRRSPSRSLSRSRSYSRSRSPVRRRERSVEERSR 164
Query: 532 SPTRQEGAPRIPQSGLRTPL 591
SP R + + P++ R+P+
Sbjct: 165 SPKRMDDS-LSPRARDRSPV 183
>At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 290
Score = 33.5 bits (73), Expect = 0.12
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 355 NCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQK-KRNTFHLSSAKPIRRQSRGCDQSHR 531
NC+N+ + S S V+S + R S + R+ + S P+RR+ R ++ R
Sbjct: 135 NCKNSPKKLRRSGSYSRSPVRSRSPRRRRSPSRSLSRSRSYSRSRSPVRRRERSVEERSR 194
Query: 532 SPTRQEGAPRIPQSGLRTPL 591
SP R + + P++ R+P+
Sbjct: 195 SPKRMDDS-LSPRARDRSPV 213
>At1g29790.1 68414.m03642 expressed protein
Length = 378
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 465 YVPSEQRKTDQKTVERL*SKPSEPDPTRRCSADTSKRPSDS 587
Y P +D VE+L + P P RRC + T + PSDS
Sbjct: 122 YTPFSLCPSDTDLVEKLILRGCHPLPRRRCFSRTPRNPSDS 162
>At5g64200.2 68418.m08063 arginine/serine-rich splicing factor SC35
contains similarity to splicing factor; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 303
Score = 31.9 bits (69), Expect = 0.38
Identities = 21/78 (26%), Positives = 29/78 (37%)
Frame = +1
Query: 388 RRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSRGCDQSHRSPTRQEGAPRIP 567
RR RS S +RV + R+ SA P RR R SP R+ +
Sbjct: 182 RRTRSRSASPDEKRRVRGRYDNESRSHSRSLSASPARRSPRSSSPQKTSPAREVSPDKRS 241
Query: 568 QSGLRTPLEPISPSAALL 621
+P +SP + L
Sbjct: 242 NERSPSPRRSLSPRSPAL 259
>At5g64200.1 68418.m08062 arginine/serine-rich splicing factor SC35
contains similarity to splicing factor; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 303
Score = 31.9 bits (69), Expect = 0.38
Identities = 21/78 (26%), Positives = 29/78 (37%)
Frame = +1
Query: 388 RRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSRGCDQSHRSPTRQEGAPRIP 567
RR RS S +RV + R+ SA P RR R SP R+ +
Sbjct: 182 RRTRSRSASPDEKRRVRGRYDNESRSHSRSLSASPARRSPRSSSPQKTSPAREVSPDKRS 241
Query: 568 QSGLRTPLEPISPSAALL 621
+P +SP + L
Sbjct: 242 NERSPSPRRSLSPRSPAL 259
>At4g21900.1 68417.m03166 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile PF01554:
MatE
Length = 1094
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 394 IRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSRGCDQSHRSPTRQEGAPRIPQS 573
+R +S+ +NAK V + ++ S A R+SR D+S ++P +++ R P+
Sbjct: 447 VRVSSSTFANAKLVTLRNHTVNLHIYYCSMAGTDNRRSRHDDESPKNPNKKKKGNRNPEK 506
Query: 574 GLRTPLEPIS 603
L L S
Sbjct: 507 SLLINLHSCS 516
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +1
Query: 478 SSAKPIRRQSRGCDQSHRSPTRQEGAPRIPQSGLRTPLEPISPS 609
SS P+ S GC +S R P P P G P ISPS
Sbjct: 388 SSLPPVDCGSFGCGRSTRPPVVVPSPPTTPSPGGSPPSPSISPS 431
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 64 PLKRRKSFYPTQEKICASSGGRPFS-KHVRR 153
P++RR+S P +E++ S GGR S H+++
Sbjct: 525 PVRRRRSLTPDEERVSLSQGGRHTSPSHIKQ 555
Score = 28.7 bits (61), Expect = 3.5
Identities = 25/79 (31%), Positives = 37/79 (46%)
Frame = +1
Query: 346 ATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSRGCDQS 525
+TS + S+ RR+ S S +S ++ V SL ++R H P R +SR +
Sbjct: 238 STSQSSDASISPRKRRL-SNSRRRSRSRSVRRSLSPRRRR-IH----SPFRSRSRSPIRR 291
Query: 526 HRSPTRQEGAPRIPQSGLR 582
HR PT EG + P R
Sbjct: 292 HRRPT-HEGRRQSPAPSRR 309
>At1g06660.1 68414.m00706 expressed protein
Length = 481
Score = 29.9 bits (64), Expect = 1.5
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Frame = +1
Query: 343 SATSNCQNTSMMITSR---RIRSASN----VQSNAKRVMTSLPQKKRNTFHLSSAKPIRR 501
S TS +S +I R RI SAS+ V+S + L + R TF K +R
Sbjct: 166 SFTSEQTASSCVIDVRDNARISSASSDGTEVESVGTAIKGELDRTARPTFTAGKNKSVRF 225
Query: 502 QSRGCDQSHRSPTRQEGAPRIPQSGLRTPLEPISPSAALLNL 627
+ DQS+ S + + G+ R P+ G + SP+ L L
Sbjct: 226 EC-DLDQSNSSNSSENGSSRKPEMGGKICFTVSSPNPTPLKL 266
>At3g57070.1 68416.m06354 glutaredoxin family protein contains Pfam
profile PF00462: Glutaredoxin
Length = 417
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +1
Query: 448 PQKKRNTFHLSSAKPIRRQSR---GCDQSHRSPTRQEGAPRIPQSGLRTPLEPISPSAAL 618
P +K ++ HL S S D S S + Q+ PRI SG TP +P+SP + +
Sbjct: 52 PARKGDSHHLVSLTSTSYGSLLLLDLDGSKNSSSDQQTLPRISISGKNTP-DPVSPDSVI 110
>At1g78120.1 68414.m09104 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q99615 DnaJ homolog
subfamily C member 7 (Tetratricopeptide repeat protein
2) {Homo sapiens}; contains Pfam profile PF00515: TPR
Domain
Length = 530
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +3
Query: 453 KKEKYVPSEQRKTDQKTVERL*SKPSEPDPTRRCSADTSKRPSDSARANIPIGCASKS*N 632
+K S+ +K+D + ++ KP E P R S++++++ SDSAR +I G +S++ +
Sbjct: 62 RKSTDTSSQPKKSDSQKPQQK-PKPDENHP--RKSSESARKSSDSARKSISSG-SSRTES 117
Query: 633 KK 638
K+
Sbjct: 118 KR 119
>At1g53645.1 68414.m06102 hydroxyproline-rich glycoprotein family
protein
Length = 523
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/84 (23%), Positives = 34/84 (40%)
Frame = +1
Query: 319 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 498
S PPPE ++ + S K ++ S P ++ + + P
Sbjct: 186 SPPPPESKPGQADPPDNIFNALGNEFSHPSGA-GRGKPLVESAPIRQEDNRQIRRPPPPP 244
Query: 499 RQSRGCDQSHRSPTRQEGAPRIPQ 570
+Q R Q R+PT ++G P+ PQ
Sbjct: 245 QQQRVQPQQKRAPTVKDGTPK-PQ 267
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 24 ADWR*EEWGNQNSTPQT*EV--LLPHSGENLCFIWWPS 131
A W+ E Q ++PQ V L H G+ C +WWPS
Sbjct: 94 AIWQIPELYGQLNSPQLERVASLDAHVGKINCVLWWPS 131
>At4g23130.2 68417.m03334 receptor-like protein kinase 6 (RLK6)
identical to receptor-like protein kinase 6 [Arabidopsis
thaliana] GI:13506749; contains Pfam domain PF00069:
Protein kinase domain
Length = 663
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 71 LRGTVLVPPFFSPPICFTTTVSF 3
+ GTVL PP +PP+ +T SF
Sbjct: 248 IEGTVLPPPVSAPPLPLVSTPSF 270
>At4g23130.1 68417.m03333 receptor-like protein kinase 6 (RLK6)
identical to receptor-like protein kinase 6 [Arabidopsis
thaliana] GI:13506749; contains Pfam domain PF00069:
Protein kinase domain
Length = 659
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 71 LRGTVLVPPFFSPPICFTTTVSF 3
+ GTVL PP +PP+ +T SF
Sbjct: 248 IEGTVLPPPVSAPPLPLVSTPSF 270
>At3g16520.3 68416.m02110 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 462
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 236 FCPAVCFSYWTFCFQFVPA-TPYSSALCDRHLHQN 337
+ +V S+ + F +PA TPYSS+ RH H++
Sbjct: 53 YISSVSSSFPSITFHHLPAVTPYSSSSTSRHHHES 87
>At3g16520.2 68416.m02109 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 446
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 236 FCPAVCFSYWTFCFQFVPA-TPYSSALCDRHLHQN 337
+ +V S+ + F +PA TPYSS+ RH H++
Sbjct: 53 YISSVSSSFPSITFHHLPAVTPYSSSSTSRHHHES 87
>At3g16520.1 68416.m02108 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 451
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 236 FCPAVCFSYWTFCFQFVPA-TPYSSALCDRHLHQN 337
+ +V S+ + F +PA TPYSS+ RH H++
Sbjct: 53 YISSVSSSFPSITFHHLPAVTPYSSSSTSRHHHES 87
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +1
Query: 319 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIR 498
S PP +S Q + + T + AS ++K MTS Q ++N F + S +
Sbjct: 1082 SWPPAAGYSFVCWFQFRNFLTTQGKESEASKAGGSSKTRMTSAQQHEQNIFRMFSVGAVS 1141
Query: 499 RQS 507
+S
Sbjct: 1142 NES 1144
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,075,068
Number of Sequences: 28952
Number of extensions: 331497
Number of successful extensions: 965
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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