Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30531
(306 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q96AT9 Cluster: Ribulose-phosphate 3-epimerase; n=57; F... 46 2e-04
UniRef50_Q7QYY2 Cluster: GLP_164_20691_19966; n=2; Eukaryota|Rep... 41 0.005
UniRef50_Q5KNF9 Cluster: Ribulose-phosphate 3-epimerase, putativ... 41 0.006
UniRef50_Q60CZ3 Cluster: Ribulose-phosphate 3-epimerase, cytopla... 40 0.011
UniRef50_Q7UX51 Cluster: Ribulose-phosphate 3-epimerase; n=2; Pl... 39 0.025
UniRef50_Q4XFJ9 Cluster: D-ribulose-5-phosphate 3-epimerase, put... 38 0.033
UniRef50_Q4FNU8 Cluster: Ribulose-phosphate 3-epimerase; n=5; Ba... 37 0.077
UniRef50_A7DKK1 Cluster: Ribulose-phosphate 3-epimerase; n=3; Al... 37 0.10
UniRef50_A6BJN0 Cluster: Putative uncharacterized protein; n=2; ... 36 0.23
UniRef50_Q5L0R7 Cluster: Ribulose-phosphate 3-epimerase; n=8; Ba... 35 0.31
UniRef50_Q0LCN9 Cluster: Ribulose-phosphate 3-epimerase; n=1; He... 35 0.31
UniRef50_Q67PQ3 Cluster: Ribulose-5-phosphate 3-epimerase; n=16;... 35 0.41
UniRef50_A0E8J5 Cluster: Chromosome undetermined scaffold_83, wh... 35 0.41
UniRef50_P46969 Cluster: Ribulose-phosphate 3-epimerase; n=19; F... 35 0.41
UniRef50_P0AG10 Cluster: Ribulose-phosphate 3-epimerase; n=293; ... 35 0.41
UniRef50_Q83HT4 Cluster: D-ribulose-5-phosphate 3-epimerase; n=2... 34 0.54
UniRef50_Q746Z3 Cluster: Ribulose-phosphate 3-epimerase; n=13; B... 34 0.54
UniRef50_A6LN69 Cluster: Ribulose-phosphate 3-epimerase; n=1; Th... 34 0.54
UniRef50_Q4WZZ9 Cluster: Ribulose-phosphate 3-epimerase; n=16; P... 34 0.54
UniRef50_O66107 Cluster: Ribulose-phosphate 3-epimerase; n=2; Tr... 34 0.54
UniRef50_Q9X243 Cluster: Ribulose-phosphate 3-epimerase; n=3; Th... 34 0.71
UniRef50_Q8D1X6 Cluster: Rpe protein; n=1; Wigglesworthia glossi... 34 0.71
UniRef50_Q6L0S2 Cluster: Ribulose-phosphate 3-epimerase; n=4; Th... 34 0.71
UniRef50_P74061 Cluster: Ribulose-phosphate 3-epimerase; n=102; ... 34 0.71
UniRef50_Q1IVM1 Cluster: Ribulose-phosphate 3-epimerase; n=6; Ba... 33 0.94
UniRef50_A4M924 Cluster: Ribulose-phosphate 3-epimerase; n=2; Ba... 33 0.94
UniRef50_Q6TGQ9 Cluster: L-amino-acid oxidase precursor; n=6; Sa... 33 0.94
UniRef50_UPI000050F74E Cluster: COG0036: Pentose-5-phosphate-3-e... 33 1.2
UniRef50_Q83AL2 Cluster: Ribulose-phosphate 3-epimerase; n=3; Co... 33 1.2
UniRef50_Q7VCA2 Cluster: Pentose-5-phosphate-3-epimerase; n=10; ... 33 1.2
UniRef50_A3EQR0 Cluster: Pentose-5-phosphate-3-epimerase; n=1; L... 33 1.7
UniRef50_A0RTR4 Cluster: Transketolase, N-terminal subunit; n=1;... 33 1.7
UniRef50_P65761 Cluster: Ribulose-phosphate 3-epimerase; n=50; B... 33 1.7
UniRef50_O84123 Cluster: Ribulose-phosphate 3-epimerase; n=13; C... 33 1.7
UniRef50_Q6MJL8 Cluster: Probable ribulose-phosphate 3-epimerase... 32 2.2
UniRef50_A7DRC2 Cluster: Ribulose-phosphate 3-epimerase; n=1; Ca... 32 2.2
UniRef50_Q9SE42 Cluster: Ribulose-phosphate 3-epimerase, cytopla... 32 2.2
UniRef50_Q30Y18 Cluster: Ribulose-phosphate 3-epimerase; n=2; De... 32 2.9
UniRef50_Q6MD57 Cluster: Putative ribulose-phosphate 3-epimerase... 31 3.8
UniRef50_Q2GE71 Cluster: Ribulose-phosphate 3-epimerase; n=1; Ne... 31 3.8
UniRef50_A2U5A5 Cluster: Ribulose-phosphate 3-epimerase; n=1; Ba... 31 3.8
UniRef50_Q58093 Cluster: Ribulose-phosphate 3-epimerase; n=6; Me... 31 3.8
UniRef50_Q8A0S5 Cluster: Ribulose-phosphate 3-epimerase; n=5; Ba... 31 5.0
UniRef50_O14105 Cluster: Ribulose-phosphate 3-epimerase; n=4; Eu... 31 5.0
UniRef50_Q9RUI5 Cluster: Ribulose-phosphate 3-epimerase; n=35; B... 31 6.7
UniRef50_Q5FJI0 Cluster: Ribulose-phosphate 3-epimerase; n=5; La... 31 6.7
UniRef50_A5ZMI1 Cluster: Putative uncharacterized protein; n=2; ... 31 6.7
UniRef50_Q43157 Cluster: Ribulose-phosphate 3-epimerase, chlorop... 31 6.7
>UniRef50_Q96AT9 Cluster: Ribulose-phosphate 3-epimerase; n=57;
Fungi/Metazoa group|Rep: Ribulose-phosphate 3-epimerase
- Homo sapiens (Human)
Length = 228
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +2
Query: 164 IGPSILNADLSQLYEESQKLLDNGADYLHL 253
IGPSILN+DL+ L E ++LD+GADYLHL
Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHL 36
Score = 38.7 bits (86), Expect = 0.025
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
VMDG FVPN+TFGHPVV
Sbjct: 38 VMDGHFVPNITFGHPVV 54
>UniRef50_Q7QYY2 Cluster: GLP_164_20691_19966; n=2; Eukaryota|Rep:
GLP_164_20691_19966 - Giardia lamblia ATCC 50803
Length = 241
Score = 41.1 bits (92), Expect = 0.005
Identities = 18/31 (58%), Positives = 27/31 (87%)
Frame = +2
Query: 161 LIGPSILNADLSQLYEESQKLLDNGADYLHL 253
LI PSIL+AD S+L +E+Q++L+ GAD+LH+
Sbjct: 3 LIAPSILSADFSKLGQEAQEVLNCGADWLHV 33
Score = 32.7 bits (71), Expect = 1.7
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
VMDG FVPNLT G PV+
Sbjct: 35 VMDGNFVPNLTIGPPVI 51
>UniRef50_Q5KNF9 Cluster: Ribulose-phosphate 3-epimerase, putative;
n=3; Basidiomycota|Rep: Ribulose-phosphate 3-epimerase,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 224
Score = 40.7 bits (91), Expect = 0.006
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +2
Query: 155 KALIGPSILNADLSQLYEESQKLLDNGADYLHL 253
KA+I PS+L +DLS L E ++++ NG D+LH+
Sbjct: 3 KAIISPSVLASDLSDLSNECRRMMANGCDWLHM 35
Score = 30.7 bits (66), Expect = 6.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
VMDG FVPN+T G P++
Sbjct: 37 VMDGHFVPNITMGAPIL 53
>UniRef50_Q60CZ3 Cluster: Ribulose-phosphate 3-epimerase,
cytoplasmic isoform, putative; n=3; Magnoliophyta|Rep:
Ribulose-phosphate 3-epimerase, cytoplasmic isoform,
putative - Solanum demissum (Wild potato)
Length = 273
Score = 39.9 bits (89), Expect = 0.011
Identities = 15/34 (44%), Positives = 28/34 (82%)
Frame = +2
Query: 152 LKALIGPSILNADLSQLYEESQKLLDNGADYLHL 253
+KA+I PS+L++D + L E++++L+ GAD+LH+
Sbjct: 2 VKAIIAPSMLSSDFANLASEAERMLNCGADWLHM 35
>UniRef50_Q7UX51 Cluster: Ribulose-phosphate 3-epimerase; n=2;
Planctomycetaceae|Rep: Ribulose-phosphate 3-epimerase -
Rhodopirellula baltica
Length = 235
Score = 38.7 bits (86), Expect = 0.025
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +1
Query: 181 QC*FISII*RISKVA**WSRLFTFSVMDGQFVPNLTFGHPVV 306
QC F + I K+ +R+ VMDG FVPNLT+G P+V
Sbjct: 22 QCDFGDLRTEIEKLTVAGTRVLHLDVMDGHFVPNLTYGMPIV 63
>UniRef50_Q4XFJ9 Cluster: D-ribulose-5-phosphate 3-epimerase,
putative; n=7; Plasmodium|Rep: D-ribulose-5-phosphate
3-epimerase, putative - Plasmodium chabaudi
Length = 227
Score = 38.3 bits (85), Expect = 0.033
Identities = 16/38 (42%), Positives = 32/38 (84%)
Frame = +2
Query: 140 MTRHLKALIGPSILNADLSQLYEESQKLLDNGADYLHL 253
MT+ ++A+I PS+L +++S+L EE++++ D GA+++HL
Sbjct: 1 MTK-IEAIIAPSVLASNISKLAEETKRMEDLGAEWIHL 37
>UniRef50_Q4FNU8 Cluster: Ribulose-phosphate 3-epimerase; n=5;
Bacteria|Rep: Ribulose-phosphate 3-epimerase -
Pelagibacter ubique
Length = 219
Score = 37.1 bits (82), Expect = 0.077
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +2
Query: 155 KALIGPSILNADLSQLYEESQKLLDNGADYLHL 253
K I PSIL+AD SQL E ++L + GAD +H+
Sbjct: 3 KIQISPSILSADFSQLRNEIKRLEEGGADMIHV 35
Score = 32.3 bits (70), Expect = 2.2
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
VMDG FVPNLT G P++
Sbjct: 37 VMDGHFVPNLTMGPPII 53
>UniRef50_A7DKK1 Cluster: Ribulose-phosphate 3-epimerase; n=3;
Alphaproteobacteria|Rep: Ribulose-phosphate 3-epimerase
- Methylobacterium extorquens PA1
Length = 280
Score = 36.7 bits (81), Expect = 0.10
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +2
Query: 161 LIGPSILNADLSQLYEESQKLLDNGADYLHL 253
L+ PSIL AD S+L EE++ + GAD++HL
Sbjct: 56 LLAPSILAADFSRLGEETRAIAQAGADWIHL 86
>UniRef50_A6BJN0 Cluster: Putative uncharacterized protein; n=2;
Clostridiales|Rep: Putative uncharacterized protein -
Dorea longicatena DSM 13814
Length = 221
Score = 35.5 bits (78), Expect = 0.23
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 161 LIGPSILNADLSQLYEESQKLLDNGADYLH 250
++ PSIL AD L +E +K DNGA+Y+H
Sbjct: 5 VLAPSILAADFKVLGQEMKKTEDNGAEYIH 34
Score = 32.3 bits (70), Expect = 2.2
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 250 FSVMDGQFVPNLTFGHPVV 306
F VMDG FVP+++FG PV+
Sbjct: 35 FDVMDGMFVPSISFGMPVM 53
>UniRef50_Q5L0R7 Cluster: Ribulose-phosphate 3-epimerase; n=8;
Bacteria|Rep: Ribulose-phosphate 3-epimerase -
Geobacillus kaustophilus
Length = 220
Score = 35.1 bits (77), Expect = 0.31
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
+MDG FVPNLTFG PVV
Sbjct: 37 IMDGHFVPNLTFGPPVV 53
Score = 34.7 bits (76), Expect = 0.41
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +2
Query: 164 IGPSILNADLSQLYEESQKLLDNGADYLHL 253
I PSIL+AD ++L EE + + + GAD++H+
Sbjct: 6 IAPSILSADFARLAEEIRSVEEGGADWIHV 35
>UniRef50_Q0LCN9 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Herpetosiphon aurantiacus ATCC 23779|Rep:
Ribulose-phosphate 3-epimerase - Herpetosiphon
aurantiacus ATCC 23779
Length = 227
Score = 35.1 bits (77), Expect = 0.31
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
VMDG FVPNLTFG PV+
Sbjct: 44 VMDGHFVPNLTFGPPVI 60
>UniRef50_Q67PQ3 Cluster: Ribulose-5-phosphate 3-epimerase; n=16;
Bacteria|Rep: Ribulose-5-phosphate 3-epimerase -
Symbiobacterium thermophilum
Length = 220
Score = 34.7 bits (76), Expect = 0.41
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 232 WSRLFTFSVMDGQFVPNLTFGHPVV 306
W+ L VMDG FVPN+TFG PV+
Sbjct: 29 WAHL---DVMDGHFVPNITFGPPVI 50
>UniRef50_A0E8J5 Cluster: Chromosome undetermined scaffold_83, whole
genome shotgun sequence; n=2; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_83, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 199
Score = 34.7 bits (76), Expect = 0.41
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
VMDG FVPNLTFG P++
Sbjct: 10 VMDGHFVPNLTFGPPII 26
>UniRef50_P46969 Cluster: Ribulose-phosphate 3-epimerase; n=19;
Fungi/Metazoa group|Rep: Ribulose-phosphate 3-epimerase
- Saccharomyces cerevisiae (Baker's yeast)
Length = 238
Score = 34.7 bits (76), Expect = 0.41
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 152 LKALIGPSILNADLSQLYEESQKLLDNGADYLHL 253
+K +I PSIL +D + L E K+++ GAD+LH+
Sbjct: 2 VKPIIAPSILASDFANLGCECHKVINAGADWLHI 35
Score = 32.7 bits (71), Expect = 1.7
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
VMDG FVPN+T G P+V
Sbjct: 37 VMDGHFVPNITLGQPIV 53
>UniRef50_P0AG10 Cluster: Ribulose-phosphate 3-epimerase; n=293;
cellular organisms|Rep: Ribulose-phosphate 3-epimerase -
Shigella flexneri
Length = 225
Score = 34.7 bits (76), Expect = 0.41
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +2
Query: 161 LIGPSILNADLSQLYEESQKLLDNGADYLH 250
LI PSIL+AD ++L E++ K L GAD +H
Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVH 34
>UniRef50_Q83HT4 Cluster: D-ribulose-5-phosphate 3-epimerase; n=2;
Tropheryma whipplei|Rep: D-ribulose-5-phosphate
3-epimerase - Tropheryma whipplei (strain TW08/27)
(Whipple's bacillus)
Length = 219
Score = 34.3 bits (75), Expect = 0.54
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
VMDG FVPN+TFG PVV
Sbjct: 34 VMDGHFVPNITFGLPVV 50
>UniRef50_Q746Z3 Cluster: Ribulose-phosphate 3-epimerase; n=13;
Bacteria|Rep: Ribulose-phosphate 3-epimerase - Geobacter
sulfurreducens
Length = 221
Score = 34.3 bits (75), Expect = 0.54
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +2
Query: 164 IGPSILNADLSQLYEESQKLLDNGADYLHL 253
I PSIL+AD S+L +E + + GADY+H+
Sbjct: 4 IAPSILSADFSRLGDEVRAVAAAGADYIHV 33
>UniRef50_A6LN69 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Thermosipho melanesiensis BI429|Rep: Ribulose-phosphate
3-epimerase - Thermosipho melanesiensis BI429
Length = 214
Score = 34.3 bits (75), Expect = 0.54
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
VMDG FVPNLTFG P++
Sbjct: 34 VMDGHFVPNLTFGFPLI 50
>UniRef50_Q4WZZ9 Cluster: Ribulose-phosphate 3-epimerase; n=16;
Pezizomycotina|Rep: Ribulose-phosphate 3-epimerase -
Aspergillus fumigatus (Sartorya fumigata)
Length = 313
Score = 34.3 bits (75), Expect = 0.54
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
+MDG FVPN+TFG PVV
Sbjct: 99 IMDGHFVPNMTFGAPVV 115
Score = 33.9 bits (74), Expect = 0.71
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +2
Query: 128 SKTKMTRHLKALIGPSILNADLSQLYEESQKLLDNGADYLHL 253
S T T A+I PSIL+AD + L E + GAD+LH+
Sbjct: 56 SFTHPTMSPPAIIAPSILSADFAVLGNECSTKIAQGADWLHV 97
>UniRef50_O66107 Cluster: Ribulose-phosphate 3-epimerase; n=2;
Treponema|Rep: Ribulose-phosphate 3-epimerase -
Treponema pallidum
Length = 218
Score = 34.3 bits (75), Expect = 0.54
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
VMDG FVPNLTFG PV+
Sbjct: 38 VMDGHFVPNLTFGAPVL 54
>UniRef50_Q9X243 Cluster: Ribulose-phosphate 3-epimerase; n=3;
Thermotogaceae|Rep: Ribulose-phosphate 3-epimerase -
Thermotoga maritima
Length = 220
Score = 33.9 bits (74), Expect = 0.71
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 250 FSVMDGQFVPNLTFGHPVV 306
F VMDG FVPN++FG PV+
Sbjct: 32 FDVMDGHFVPNISFGLPVL 50
>UniRef50_Q8D1X6 Cluster: Rpe protein; n=1; Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis|Rep:
Rpe protein - Wigglesworthia glossinidia brevipalpis
Length = 233
Score = 33.9 bits (74), Expect = 0.71
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 164 IGPSILNADLSQLYEESQKLLDNGADYLH 250
I PSIL A+ + L EE +K++D GAD +H
Sbjct: 7 ISPSILAANFANLGEEIRKVIDAGADIIH 35
>UniRef50_Q6L0S2 Cluster: Ribulose-phosphate 3-epimerase; n=4;
Thermoplasmatales|Rep: Ribulose-phosphate 3-epimerase -
Picrophilus torridus
Length = 214
Score = 33.9 bits (74), Expect = 0.71
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 164 IGPSILNADLSQLYEESQKLLDNGADYLHL 253
+ PSI+++DLS LY+E ++ D GA HL
Sbjct: 4 VSPSIISSDLSHLYDEIKRCEDAGAGSFHL 33
>UniRef50_P74061 Cluster: Ribulose-phosphate 3-epimerase; n=102;
cellular organisms|Rep: Ribulose-phosphate 3-epimerase -
Synechocystis sp. (strain PCC 6803)
Length = 230
Score = 33.9 bits (74), Expect = 0.71
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = +2
Query: 161 LIGPSILNADLSQLYEESQKLLDNGADYLHL 253
++ PSIL+AD S+L EE + + + GAD++H+
Sbjct: 6 VVAPSILSADFSRLGEEIKAVDEAGADWIHV 36
>UniRef50_Q1IVM1 Cluster: Ribulose-phosphate 3-epimerase; n=6;
Bacteria|Rep: Ribulose-phosphate 3-epimerase -
Acidobacteria bacterium (strain Ellin345)
Length = 224
Score = 33.5 bits (73), Expect = 0.94
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1
Query: 250 FSVMDGQFVPNLTFGHPVV 306
F VMDG FVPN+T G PV+
Sbjct: 33 FDVMDGHFVPNITIGPPVL 51
>UniRef50_A4M924 Cluster: Ribulose-phosphate 3-epimerase; n=2;
Bacteria|Rep: Ribulose-phosphate 3-epimerase - Petrotoga
mobilis SJ95
Length = 219
Score = 33.5 bits (73), Expect = 0.94
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
+MDG FVPN+TFG P+V
Sbjct: 34 IMDGVFVPNITFGFPIV 50
>UniRef50_Q6TGQ9 Cluster: L-amino-acid oxidase precursor; n=6;
Sauria|Rep: L-amino-acid oxidase precursor - Bothrops
jararacussu (Jararacussu)
Length = 497
Score = 33.5 bits (73), Expect = 0.94
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 29 YIRFKSLLIDDLTQPKSNFWEF*DLKFFRRKIRSKTKMTRHLKALIGPSILNADLSQLYE 208
YIR L +++ +Q N W F +K R+++ K L + PS + QLYE
Sbjct: 114 YIRKFGLQLNEFSQENENAWYF--IKNIRKRVGEVNKDPGVLDYPVKPSEVGKSAGQLYE 171
Query: 209 ES-QKLLD 229
ES QK ++
Sbjct: 172 ESLQKAVE 179
>UniRef50_UPI000050F74E Cluster: COG0036:
Pentose-5-phosphate-3-epimerase; n=1; Brevibacterium
linens BL2|Rep: COG0036: Pentose-5-phosphate-3-epimerase
- Brevibacterium linens BL2
Length = 220
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
VMD FVPNLTFG PVV
Sbjct: 34 VMDNHFVPNLTFGPPVV 50
>UniRef50_Q83AL2 Cluster: Ribulose-phosphate 3-epimerase; n=3;
Coxiella burnetii|Rep: Ribulose-phosphate 3-epimerase -
Coxiella burnetii
Length = 222
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 155 KALIGPSILNADLSQLYEESQKLLDNGADYLH 250
K +I SIL+AD S+L EE + ++ GAD +H
Sbjct: 3 KKIISASILSADFSRLGEEVKSVIQAGADNIH 34
>UniRef50_Q7VCA2 Cluster: Pentose-5-phosphate-3-epimerase; n=10;
Cyanobacteria|Rep: Pentose-5-phosphate-3-epimerase -
Prochlorococcus marinus
Length = 247
Score = 33.1 bits (72), Expect = 1.2
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1
Query: 250 FSVMDGQFVPNLTFGHPVV 306
F VMDG FVPNLTFG ++
Sbjct: 43 FDVMDGNFVPNLTFGPEMI 61
>UniRef50_A3EQR0 Cluster: Pentose-5-phosphate-3-epimerase; n=1;
Leptospirillum sp. Group II UBA|Rep:
Pentose-5-phosphate-3-epimerase - Leptospirillum sp.
Group II UBA
Length = 231
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 161 LIGPSILNADLSQLYEESQKLLDNGADYLHL 253
LI PS+L D ++L EE +++ +GAD +HL
Sbjct: 11 LIAPSLLAGDFARLGEEVKQISHSGADLIHL 41
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +1
Query: 241 LFTFSVMDGQFVPNLTFGHPVV 306
L VMDG FVPNLTFG V+
Sbjct: 38 LIHLDVMDGDFVPNLTFGPGVI 59
>UniRef50_A0RTR4 Cluster: Transketolase, N-terminal subunit; n=1;
Cenarchaeum symbiosum|Rep: Transketolase, N-terminal
subunit - Cenarchaeum symbiosum
Length = 504
Score = 32.7 bits (71), Expect = 1.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 164 IGPSILNADLSQLYEESQKLLDNGADYLHL 253
I PSI+ D++ L E ++ + GADY+HL
Sbjct: 243 IAPSIIAGDMTDLSGEVRRCAEGGADYIHL 272
>UniRef50_P65761 Cluster: Ribulose-phosphate 3-epimerase; n=50;
Bacteria|Rep: Ribulose-phosphate 3-epimerase -
Mycobacterium bovis
Length = 229
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
VMDG FVPNLT G PVV
Sbjct: 39 VMDGHFVPNLTIGLPVV 55
>UniRef50_O84123 Cluster: Ribulose-phosphate 3-epimerase; n=13;
Chlamydiaceae|Rep: Ribulose-phosphate 3-epimerase -
Chlamydia trachomatis
Length = 233
Score = 32.7 bits (71), Expect = 1.7
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +2
Query: 161 LIGPSILNADLSQLYEESQKLLDNGADYLHL 253
L+ PSI+ ADL+ + E++ + ++GAD +H+
Sbjct: 12 LVAPSIMGADLACIGREARNIEESGADLIHI 42
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +1
Query: 241 LFTFSVMDGQFVPNLTFGHPVV 306
L VMDG FVPN+TFG VV
Sbjct: 39 LIHIDVMDGHFVPNITFGPGVV 60
>UniRef50_Q6MJL8 Cluster: Probable ribulose-phosphate 3-epimerase;
n=1; Bdellovibrio bacteriovorus|Rep: Probable
ribulose-phosphate 3-epimerase - Bdellovibrio
bacteriovorus
Length = 210
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
VMDG+FVPN+T G PVV
Sbjct: 33 VMDGRFVPNITIGIPVV 49
Score = 31.9 bits (69), Expect = 2.9
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 161 LIGPSILNADLSQLYEESQKLLDNGADYLHL 253
++ PSIL+AD + L +E + + GAD++H+
Sbjct: 1 MVAPSILSADFANLEKEIKAVAQAGADWIHV 31
>UniRef50_A7DRC2 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep:
Ribulose-phosphate 3-epimerase - Candidatus
Nitrosopumilus maritimus SCM1
Length = 555
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 161 LIGPSILNADLSQLYEESQKLLDNGADYLHL 253
+I PSI+ D+S L E ++ + ADY+HL
Sbjct: 292 MIAPSIIAGDMSNLENEVKRCVSGRADYIHL 322
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1
Query: 256 VMDGQFVPNLTFGH 297
VMDGQFVPN TF H
Sbjct: 324 VMDGQFVPNKTFDH 337
>UniRef50_Q9SE42 Cluster: Ribulose-phosphate 3-epimerase,
cytoplasmic isoform; n=10; Eukaryota|Rep:
Ribulose-phosphate 3-epimerase, cytoplasmic isoform -
Oryza sativa subsp. japonica (Rice)
Length = 228
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 158 ALIGPSILNADLSQLYEESQKLLDNGADYLHL 253
A I PS+L++D + L E+ +++ GAD+LH+
Sbjct: 7 AKIAPSMLSSDFANLAAEADRMVRLGADWLHM 38
Score = 32.3 bits (70), Expect = 2.2
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
+MDG FVPNLT G PV+
Sbjct: 40 IMDGHFVPNLTIGAPVI 56
>UniRef50_Q30Y18 Cluster: Ribulose-phosphate 3-epimerase; n=2;
Desulfovibrionaceae|Rep: Ribulose-phosphate 3-epimerase
- Desulfovibrio desulfuricans (strain G20)
Length = 217
Score = 31.9 bits (69), Expect = 2.9
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 250 FSVMDGQFVPNLTFGHPVV 306
+ VMDG FVPN+T G P++
Sbjct: 32 WDVMDGMFVPNITLGAPII 50
>UniRef50_Q6MD57 Cluster: Putative ribulose-phosphate 3-epimerase;
n=1; Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ribulose-phosphate 3-epimerase - Protochlamydia
amoebophila (strain UWE25)
Length = 243
Score = 31.5 bits (68), Expect = 3.8
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 140 MTRHLKAL-IGPSILNADLSQLYEESQKLLDNGADYLHL 253
M R +A+ I PSIL D L +E++K GAD LHL
Sbjct: 1 MKREPQAVKIAPSILAGDFGHLADEAKKAEQAGADSLHL 39
>UniRef50_Q2GE71 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Neorickettsia sennetsu str. Miyayama|Rep:
Ribulose-phosphate 3-epimerase - Neorickettsia sennetsu
(strain Miyayama)
Length = 220
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
VMDG FVPNLTFG PV+
Sbjct: 38 VMDGHFVPNLTFG-PVI 53
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 149 HLKALIGPSILNADLSQLYEESQKLLDNGADYLHL 253
H I PS+L+AD L+ + + L ++GAD +H+
Sbjct: 2 HRMIKISPSLLSADFLNLHSDVKLLEESGADSIHI 36
>UniRef50_A2U5A5 Cluster: Ribulose-phosphate 3-epimerase; n=1;
Bacillus coagulans 36D1|Rep: Ribulose-phosphate
3-epimerase - Bacillus coagulans 36D1
Length = 239
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 164 IGPSILNADLSQLYEESQKLLDNGADYLHL 253
IGPS++ ADL +L E +++ + G D+ HL
Sbjct: 4 IGPSLMCADLGRLAENIKEMDEAGVDFYHL 33
>UniRef50_Q58093 Cluster: Ribulose-phosphate 3-epimerase; n=6;
Methanococcales|Rep: Ribulose-phosphate 3-epimerase -
Methanococcus jannaschii
Length = 234
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 164 IGPSILNADLSQLYEESQKLLDNGADYLHL 253
IG SIL+AD L EE +K + G D+ H+
Sbjct: 4 IGASILSADFGHLREEIKKAEEAGVDFFHV 33
>UniRef50_Q8A0S5 Cluster: Ribulose-phosphate 3-epimerase; n=5;
Bacteroidetes|Rep: Ribulose-phosphate 3-epimerase -
Bacteroides thetaiotaomicron
Length = 216
Score = 31.1 bits (67), Expect = 5.0
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
+MDG FVPN++FG PV+
Sbjct: 36 IMDGVFVPNISFGFPVL 52
>UniRef50_O14105 Cluster: Ribulose-phosphate 3-epimerase; n=4;
Eukaryota|Rep: Ribulose-phosphate 3-epimerase -
Schizosaccharomyces pombe (Fission yeast)
Length = 228
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 152 LKALIGPSILNADLSQLYEESQKLLDNGADYLHL 253
++A I PS+L D + L +E ++L G+D+LH+
Sbjct: 2 VQAKIAPSLLAGDFANLEKEVGRMLKYGSDWLHV 35
>UniRef50_Q9RUI5 Cluster: Ribulose-phosphate 3-epimerase; n=35;
Bacteria|Rep: Ribulose-phosphate 3-epimerase -
Deinococcus radiodurans
Length = 299
Score = 30.7 bits (66), Expect = 6.7
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
VMDG FVPN++FG P++
Sbjct: 117 VMDGAFVPNISFGLPIL 133
>UniRef50_Q5FJI0 Cluster: Ribulose-phosphate 3-epimerase; n=5;
Lactobacillus|Rep: Ribulose-phosphate 3-epimerase -
Lactobacillus acidophilus
Length = 216
Score = 30.7 bits (66), Expect = 6.7
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 244 FTFSVMDGQFVPNLTFGHPVV 306
F +MDG FVPNL+FG +V
Sbjct: 30 FHIDIMDGHFVPNLSFGPQLV 50
>UniRef50_A5ZMI1 Cluster: Putative uncharacterized protein; n=2;
Ruminococcus|Rep: Putative uncharacterized protein -
Ruminococcus obeum ATCC 29174
Length = 224
Score = 30.7 bits (66), Expect = 6.7
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 256 VMDGQFVPNLTFGHPVV 306
VMDG FVP+++FG PV+
Sbjct: 36 VMDGDFVPSISFGMPVI 52
>UniRef50_Q43157 Cluster: Ribulose-phosphate 3-epimerase,
chloroplast precursor; n=77; cellular organisms|Rep:
Ribulose-phosphate 3-epimerase, chloroplast precursor -
Spinacia oleracea (Spinach)
Length = 285
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Frame = +2
Query: 101 LKFFRRKIRSKTKMTRHLKA------LIGPSILNADLSQLYEESQKLLDNGADYLHL 253
L F RRK+++ K T + ++ PSIL+A+ ++L E+ + + G D++H+
Sbjct: 37 LTFTRRKVQTLVKATSRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHV 93
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,245,896
Number of Sequences: 1657284
Number of extensions: 3193120
Number of successful extensions: 6547
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 6409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6545
length of database: 575,637,011
effective HSP length: 78
effective length of database: 446,368,859
effective search space used: 10266483757
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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