Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30531
         (306 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    26   0.077
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   2.2  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   3.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    20   6.7  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    19   8.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    19   8.8  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    19   8.8  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 26.2 bits (55), Expect = 0.077
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 140 MTRHLKALIGPSILNADLSQLYEESQKLLDNGADYL 247
           MTR+L    G  +  + ++ L  E  K LDNG  +L
Sbjct: 591 MTRYLGDFEGNQVEGSPVTSLNREEIKRLDNGVGFL 626


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 233 HYQATFEILHIIEINQH*ELKVQ 165
           H++   + LH  + N H E+K+Q
Sbjct: 106 HHEIKLQHLHQSKFNPHEEVKLQ 128


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 29  YIRFKSLLIDDLTQPKSNFWE 91
           YI+ K +L D  TQ  SN W+
Sbjct: 254 YIKPKCVLSDHGTQFISNTWQ 274


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 147 RVIFVLDLIFLLKNF 103
           R++FV   IF L NF
Sbjct: 14  RIVFVQSEIFCLVNF 28



 Score = 19.4 bits (38), Expect = 8.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 215 EILHIIEINQH 183
           E++H IE N+H
Sbjct: 324 ELIHKIETNEH 334


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 264 WSVCT*LNLWSSCS 305
           WSV   + +W SCS
Sbjct: 403 WSVNAGMWMWLSCS 416


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 215  EILHIIEINQH 183
            E++H IE N+H
Sbjct: 1043 ELIHKIETNEH 1053


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +2

Query: 158 ALIGPSILNADLSQLYEESQKLLDNGADY 244
           ++ G S   ADL Q Y+ +   +    D+
Sbjct: 55  SIFGSSSFEADLRQFYKTAYSAIFTVIDF 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,466
Number of Sequences: 336
Number of extensions: 902
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5518292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)