Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30531
         (306 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0657 + 19271266-19271388,19271906-19271910,19272005-192720...    32   0.077
03_01_0485 + 3695857-3695951,3696489-3696597,3696746-3696886,369...    30   0.31 
04_03_1031 + 21850857-21851009,21852229-21852350,21852447-218528...    28   1.7  
07_03_1624 + 28204892-28205024,28205160-28205242,28205305-282053...    26   6.7  
05_07_0034 - 27200513-27200605,27200750-27200802,27201724-272017...    26   6.7  

>09_04_0657 +
           19271266-19271388,19271906-19271910,19272005-19272067,
           19272150-19272256,19272321-19272418,19273070-19273162,
           19273279-19273320,19273464-19273619
          Length = 228

 Score = 32.3 bits (70), Expect = 0.077
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = +2

Query: 158 ALIGPSILNADLSQLYEESQKLLDNGADYLHL 253
           A I PS+L++D + L  E+ +++  GAD+LH+
Sbjct: 7   AKIAPSMLSSDFANLAAEADRMVRLGADWLHM 38



 Score = 32.3 bits (70), Expect = 0.077
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +1

Query: 256 VMDGQFVPNLTFGHPVV 306
           +MDG FVPNLT G PV+
Sbjct: 40  IMDGHFVPNLTIGAPVI 56


>03_01_0485 +
           3695857-3695951,3696489-3696597,3696746-3696886,
           3696986-3697099,3697558-3697636,3698163-3698272,
           3698344-3698400,3698520-3698609
          Length = 264

 Score = 30.3 bits (65), Expect = 0.31
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +2

Query: 104 KFFRRKIRSKTKMTRHLKALIGPSILNADLSQLYEESQKLLDNGADYLHL 253
           K FR +  S+         ++ PSIL+A+ S+L E+ + +   G D++H+
Sbjct: 33  KAFRVRASSRVDKFSKNDIIVSPSILSANFSKLGEQVKAVEVAGCDWIHV 82



 Score = 28.7 bits (61), Expect = 0.95
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +1

Query: 256 VMDGQFVPNLTFGHPVV 306
           VMDG+FVPN+T G  VV
Sbjct: 84  VMDGRFVPNITIGPLVV 100


>04_03_1031 + 21850857-21851009,21852229-21852350,21852447-21852891,
            21852981-21853087,21853192-21854524,21854632-21854859,
            21854951-21855181,21855278-21855537,21855651-21856113
          Length = 1113

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 164  IGPSILNADLSQLYEESQKLLDNGAD 241
            I P  L   +S+LY+   KLLDN AD
Sbjct: 972  IAPPELQNTISELYDALVKLLDNNAD 997


>07_03_1624 +
           28204892-28205024,28205160-28205242,28205305-28205376,
           28205889-28205946,28206554-28206603,28207805-28207873,
           28208183-28208317,28208410-28208581,28208663-28208754,
           28208837-28209244,28209783-28210704,28211592-28211831,
           28211898-28212229,28212460-28212608,28213265-28213841,
           28214078-28214224,28214693-28214968,28215296-28215403,
           28215634-28215839,28216079-28216217,28216329-28216982,
           28218040-28218099,28218234-28218388,28218414-28218636,
           28218729-28218773
          Length = 1834

 Score = 25.8 bits (54), Expect = 6.7
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +2

Query: 194 SQLYEESQKLLDNGADYLHLV*WMVS 271
           SQL+EE +KL+D  A+ L L+ W+ S
Sbjct: 416 SQLFEEHEKLVD--AEALGLLSWLAS 439


>05_07_0034 -
           27200513-27200605,27200750-27200802,27201724-27201797,
           27202762-27202830,27203070-27204148
          Length = 455

 Score = 25.8 bits (54), Expect = 6.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 131 KTKMTRHLKALIGPSILNADLSQLYE 208
           KTK++     +IG  ++NAD  QLY+
Sbjct: 46  KTKLSIDAAKVIGGEVVNADKIQLYD 71


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,763,230
Number of Sequences: 37544
Number of extensions: 76273
Number of successful extensions: 128
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 128
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 363831720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)